RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 ANP32BQ92688 251 aaKnown RBP14.38□□□□□ -0.11
SEMA4B-204ENST00000558065 PANK2Q9BZ23 570 aa14.37□□□□□ -0.11
SEMA4B-204ENST00000558065 ESPNB1AK53 854 aa14.37□□□□□ -0.11
SEMA4B-204ENST00000558065 KIAA1211Q6ZU35 1233 aa14.37□□□□□ -0.11
SEMA4B-204ENST00000558065 RNF123Q5XPI4 1314 aa14.37□□□□□ -0.11
SEMA4B-204ENST00000558065 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
SEMA4B-204ENST00000558065 FSD2A1L4K1 749 aa14.34□□□□□ -0.11
SEMA4B-204ENST00000558065 KIF20AO95235 890 aa14.34□□□□□ -0.11
SEMA4B-204ENST00000558065 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
SEMA4B-204ENST00000558065 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
SEMA4B-204ENST00000558065 AKNAQ7Z591 1439 aa14.34□□□□□ -0.11
SEMA4B-204ENST00000558065 SLC52A1Q9NWF4 448 aa14.33□□□□□ -0.11
SEMA4B-204ENST00000558065 MS4A1P11836 297 aa14.32□□□□□ -0.12
SEMA4B-204ENST00000558065 ZBTB22O15209 634 aa14.32□□□□□ -0.12
SEMA4B-204ENST00000558065 MMP14P50281 582 aa14.31□□□□□ -0.12
SEMA4B-204ENST00000558065 TNIKQ9UKE5 1360 aa14.31□□□□□ -0.12
SEMA4B-204ENST00000558065 ZBED9Q6R2W3 1325 aa14.3□□□□□ -0.12
SEMA4B-204ENST00000558065 FAM13BQ9NYF5 915 aa14.3□□□□□ -0.12
SEMA4B-204ENST00000558065 ATP1B4Q9UN42 357 aaPredicted RBP14.3□□□□□ -0.12
SEMA4B-204ENST00000558065 HSP90B1P14625 803 aaKnown RBP14.29□□□□□ -0.12
SEMA4B-204ENST00000558065 MAPKBP1O60336 1514 aa14.29□□□□□ -0.12
SEMA4B-204ENST00000558065 TERF1P54274 439 aa14.29□□□□□ -0.12
SEMA4B-204ENST00000558065 WWC1Q8IX03 1113 aa14.28□□□□□ -0.12
SEMA4B-204ENST00000558065 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
SEMA4B-204ENST00000558065 LETM1O95202 739 aaPredicted RBP14.26□□□□□ -0.13
SEMA4B-204ENST00000558065 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
SEMA4B-204ENST00000558065 GTPBP4Q9BZE4 634 aaKnown RBP14.26□□□□□ -0.13
SEMA4B-204ENST00000558065 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
SEMA4B-204ENST00000558065 E9PSI1 815 aa14.25□□□□□ -0.13
SEMA4B-204ENST00000558065 PSEN1P49768 467 aa14.25□□□□□ -0.13
SEMA4B-204ENST00000558065 GOLGA6L3A6NEY3 463 aa14.25□□□□□ -0.13
SEMA4B-204ENST00000558065 SMG6Q86US8 1419 aaKnown RBP14.25□□□□□ -0.13
SEMA4B-204ENST00000558065 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
SEMA4B-204ENST00000558065 MTERF4Q7Z6M4 381 aaKnown RBP14.24□□□□□ -0.13
SEMA4B-204ENST00000558065 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
SEMA4B-204ENST00000558065 CUX2O14529 1486 aa14.23□□□□□ -0.13
SEMA4B-204ENST00000558065 ARID3AQ99856 593 aa14.23□□□□□ -0.13
SEMA4B-204ENST00000558065 OFD1O75665 1012 aa14.22□□□□□ -0.13
SEMA4B-204ENST00000558065 DNTTIP2Q5QJE6 756 aaKnown RBP14.22□□□□□ -0.13
SEMA4B-204ENST00000558065 CDK11BP21127 795 aaKnown RBP14.21□□□□□ -0.13
SEMA4B-204ENST00000558065 TAF3Q5VWG9 929 aa14.21□□□□□ -0.13
SEMA4B-204ENST00000558065 CERS3Q8IU89 383 aa14.21□□□□□ -0.13
SEMA4B-204ENST00000558065 CCDC94Q9BW85 323 aaPredicted RBP14.21□□□□□ -0.13
SEMA4B-204ENST00000558065 SOX12O15370 315 aa14.21□□□□□ -0.14
SEMA4B-204ENST00000558065 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.14
SEMA4B-204ENST00000558065 SLC20A2Q08357 652 aa14.21□□□□□ -0.14
SEMA4B-204ENST00000558065 HDAC5Q9UQL6 1122 aa14.21□□□□□ -0.14
SEMA4B-204ENST00000558065 CCDC184Q52MB2 194 aa14.2□□□□□ -0.14
SEMA4B-204ENST00000558065 AMER1Q5JTC6 1135 aaPredicted RBP14.2□□□□□ -0.14
SEMA4B-204ENST00000558065 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
SEMA4B-204ENST00000558065 IRX5P78411 483 aaPredicted RBP14.18□□□□□ -0.14
SEMA4B-204ENST00000558065 TMED8Q6PL24 325 aaPredicted RBP14.18□□□□□ -0.14
SEMA4B-204ENST00000558065 TMC1Q8TDI8 760 aa14.17□□□□□ -0.14
SEMA4B-204ENST00000558065 CLGNO14967 610 aa14.16□□□□□ -0.14
SEMA4B-204ENST00000558065 MYH16Q9H6N6 1097 aa14.16□□□□□ -0.14
SEMA4B-204ENST00000558065 MRE11P49959 708 aa14.15□□□□□ -0.14
SEMA4B-204ENST00000558065 FAM193AP78312 1265 aa14.13□□□□□ -0.15
SEMA4B-204ENST00000558065 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.13□□□□□ -0.15
SEMA4B-204ENST00000558065 CGNQ9P2M7 1197 aaKnown RBP14.13□□□□□ -0.15
SEMA4B-204ENST00000558065 CECR2Q9BXF3 1484 aa14.13□□□□□ -0.15
SEMA4B-204ENST00000558065 GRIPAP1Q4V328 841 aa14.13□□□□□ -0.15
SEMA4B-204ENST00000558065 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
SEMA4B-204ENST00000558065 UQCRHLA0A096LP55 91 aa14.11□□□□□ -0.15
SEMA4B-204ENST00000558065 UQCRHP07919 91 aa14.11□□□□□ -0.15
SEMA4B-204ENST00000558065 P3H3Q8IVL6 736 aa14.11□□□□□ -0.15
SEMA4B-204ENST00000558065 DYNC1I1O14576 645 aa14.11□□□□□ -0.15
SEMA4B-204ENST00000558065 CHMP4CQ96CF2 233 aa14.1□□□□□ -0.15
SEMA4B-204ENST00000558065 AEBP1Q8IUX7 1158 aa14.1□□□□□ -0.15
SEMA4B-204ENST00000558065 GRPEL1Q9HAV7 217 aa14.09□□□□□ -0.15
SEMA4B-204ENST00000558065 TRIM44Q96DX7 344 aaPredicted RBP14.09□□□□□ -0.15
SEMA4B-204ENST00000558065 FBXO3Q9UK99 471 aa14.08□□□□□ -0.15
SEMA4B-204ENST00000558065 R3HCC1Q9Y3T6 440 aaKnown RBP14.08□□□□□ -0.15
SEMA4B-204ENST00000558065 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
SEMA4B-204ENST00000558065 SKAP1Q86WV1 359 aa14.08□□□□□ -0.16
SEMA4B-204ENST00000558065 ZNF622Q969S3 477 aaKnown RBP eCLIP14.07□□□□□ -0.16
SEMA4B-204ENST00000558065 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
SEMA4B-204ENST00000558065 PHLDB1Q86UU1 1377 aa14.06□□□□□ -0.16
SEMA4B-204ENST00000558065 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
SEMA4B-204ENST00000558065 FAM43BQ6ZT52 329 aaPredicted RBP14.06□□□□□ -0.16
SEMA4B-204ENST00000558065 PATL2C9JE40 543 aaKnown RBP14.05□□□□□ -0.16
SEMA4B-204ENST00000558065 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
SEMA4B-204ENST00000558065 CLIP1P30622 1438 aa14.05□□□□□ -0.16
SEMA4B-204ENST00000558065 PRR29P0C7W0 189 aa14.04□□□□□ -0.16
SEMA4B-204ENST00000558065 CBX1P83916 185 aa14.04□□□□□ -0.16
SEMA4B-204ENST00000558065 ZBTB9Q96C00 473 aa14.04□□□□□ -0.16
SEMA4B-204ENST00000558065 APPP05067 770 aa14.04□□□□□ -0.16
SEMA4B-204ENST00000558065 ZSCAN30Q86W11 494 aa14.04□□□□□ -0.16
SEMA4B-204ENST00000558065 AXDND1Q5T1B0 1012 aaPredicted RBP14.04□□□□□ -0.16
SEMA4B-204ENST00000558065 GZF1Q9H116 711 aaPredicted RBP14.04□□□□□ -0.16
SEMA4B-204ENST00000558065 YY1AP1Q9H869 796 aa14.04□□□□□ -0.16
SEMA4B-204ENST00000558065 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
SEMA4B-204ENST00000558065 ANTXR1Q9H6X2 564 aa14.03□□□□□ -0.16
SEMA4B-204ENST00000558065 VIRMAQ69YN4 1812 aaKnown RBP14.03□□□□□ -0.16
SEMA4B-204ENST00000558065 GEMIN8Q9NWZ8 242 aaKnown RBP14.03□□□□□ -0.16
SEMA4B-204ENST00000558065 C8orf34Q49A92 452 aa14.02□□□□□ -0.16
SEMA4B-204ENST00000558065 CEP164Q9UPV0 1460 aa14.01□□□□□ -0.17
SEMA4B-204ENST00000558065 ATP2B3Q16720 1220 aa14.01□□□□□ -0.17
SEMA4B-204ENST00000558065 PTMAP06454 111 aaKnown RBP14□□□□□ -0.17
SEMA4B-204ENST00000558065 KCNJ4P48050 445 aa14□□□□□ -0.17
SEMA4B-204ENST00000558065 TICAM2Q86XR7 235 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms