RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 PCF11O94913 1555 aaKnown RBP14.23□□□□□ -0.13
SNRPA1-206ENST00000558059 RAPGEF3O95398 923 aa14.23□□□□□ -0.13
SNRPA1-206ENST00000558059 TROQ12816 1431 aaPredicted RBP14.22□□□□□ -0.13
SNRPA1-206ENST00000558059 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
SNRPA1-206ENST00000558059 FANCAO15360 1455 aa14.2□□□□□ -0.14
SNRPA1-206ENST00000558059 KIF14Q15058 1648 aa14.2□□□□□ -0.14
SNRPA1-206ENST00000558059 PLCH2O75038 1416 aa14.2□□□□□ -0.14
SNRPA1-206ENST00000558059 ADGRL1O94910 1474 aa14.19□□□□□ -0.14
SNRPA1-206ENST00000558059 FRMPD1Q5SYB0 1578 aa14.19□□□□□ -0.14
SNRPA1-206ENST00000558059 CCDC18Q5T9S5 1454 aa14.18□□□□□ -0.14
SNRPA1-206ENST00000558059 FYCO1Q9BQS8 1478 aa14.18□□□□□ -0.14
SNRPA1-206ENST00000558059 CFAP74Q9C0B2 1584 aa14.18□□□□□ -0.14
SNRPA1-206ENST00000558059 RICTORQ6R327 1708 aa14.17□□□□□ -0.14
SNRPA1-206ENST00000558059 MYO5CQ9NQX4 1742 aa14.16□□□□□ -0.14
SNRPA1-206ENST00000558059 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
SNRPA1-206ENST00000558059 DENND4BO75064 1496 aaPredicted RBP14.16□□□□□ -0.14
SNRPA1-206ENST00000558059 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
SNRPA1-206ENST00000558059 EFCAB2Q5VUJ9 269 aa14.14□□□□□ -0.15
SNRPA1-206ENST00000558059 SCAPERQ9BY12 1400 aa14.12□□□□□ -0.15
SNRPA1-206ENST00000558059 CDC42BPBQ9Y5S2 1711 aa14.12□□□□□ -0.15
SNRPA1-206ENST00000558059 ARHGAP5Q13017 1502 aa14.1□□□□□ -0.15
SNRPA1-206ENST00000558059 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
SNRPA1-206ENST00000558059 POGZQ7Z3K3 1410 aa14.09□□□□□ -0.15
SNRPA1-206ENST00000558059 ARHGEF40Q8TER5 1519 aa14.09□□□□□ -0.15
SNRPA1-206ENST00000558059 CDC42BPAQ5VT25 1732 aa14.08□□□□□ -0.16
SNRPA1-206ENST00000558059 PREX2Q70Z35 1606 aa14.08□□□□□ -0.16
SNRPA1-206ENST00000558059 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
SNRPA1-206ENST00000558059 MAGI2Q86UL8 1455 aa14.06□□□□□ -0.16
SNRPA1-206ENST00000558059 ADAMTSL3P82987 1691 aa14.05□□□□□ -0.16
SNRPA1-206ENST00000558059 ZFYVE16Q7Z3T8 1539 aa14.05□□□□□ -0.16
SNRPA1-206ENST00000558059 BCORL1Q5H9F3 1711 aa14.04□□□□□ -0.16
SNRPA1-206ENST00000558059 AFAP1Q8N556 730 aa14.04□□□□□ -0.16
SNRPA1-206ENST00000558059 GPATCH8Q9UKJ3 1502 aaKnown RBP14.04□□□□□ -0.16
SNRPA1-206ENST00000558059 ARID4BQ4LE39 1312 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-206ENST00000558059 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
SNRPA1-206ENST00000558059 ARHGEF12Q9NZN5 1544 aa14.03□□□□□ -0.16
SNRPA1-206ENST00000558059 SIGLEC1Q9BZZ2 1709 aa14.03□□□□□ -0.16
SNRPA1-206ENST00000558059 ABCC1P33527 1531 aa14.02□□□□□ -0.16
SNRPA1-206ENST00000558059 ZNF518AQ6AHZ1 1483 aa14.02□□□□□ -0.16
SNRPA1-206ENST00000558059 KDM5CP41229 1560 aa14.01□□□□□ -0.17
SNRPA1-206ENST00000558059 TRAPPC8Q9Y2L5 1435 aa14.01□□□□□ -0.17
SNRPA1-206ENST00000558059 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
SNRPA1-206ENST00000558059 ATP10AO60312 1499 aa14□□□□□ -0.17
SNRPA1-206ENST00000558059 VPS8Q8N3P4 1428 aa14□□□□□ -0.17
SNRPA1-206ENST00000558059 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
SNRPA1-206ENST00000558059 CCNB3Q8WWL7 1395 aa13.99□□□□□ -0.17
SNRPA1-206ENST00000558059 ZNF777Q9ULD5 760 aaPredicted RBP13.99□□□□□ -0.17
SNRPA1-206ENST00000558059 SAMD9LQ8IVG5 1584 aa13.99□□□□□ -0.17
SNRPA1-206ENST00000558059 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
SNRPA1-206ENST00000558059 MADDQ8WXG6 1647 aa13.98□□□□□ -0.17
SNRPA1-206ENST00000558059 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
SNRPA1-206ENST00000558059 PTPRMP28827 1452 aa13.98□□□□□ -0.17
SNRPA1-206ENST00000558059 MLH3Q9UHC1 1453 aa13.98□□□□□ -0.17
SNRPA1-206ENST00000558059 HECW2Q9P2P5 1572 aa13.97□□□□□ -0.17
SNRPA1-206ENST00000558059 C9orf84Q5VXU9 1444 aa13.97□□□□□ -0.17
SNRPA1-206ENST00000558059 TIAM1Q13009 1591 aa13.96□□□□□ -0.17
SNRPA1-206ENST00000558059 HNRNPMP52272 730 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNRPA1-206ENST00000558059 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
SNRPA1-206ENST00000558059 DIP2CQ9Y2E4 1556 aa13.95□□□□□ -0.18
SNRPA1-206ENST00000558059 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
SNRPA1-206ENST00000558059 KIDINS220Q9ULH0 1771 aa13.94□□□□□ -0.18
SNRPA1-206ENST00000558059 MLECQ14165 292 aa13.94□□□□□ -0.18
SNRPA1-206ENST00000558059 MYT1LQ9UL68 1186 aa13.94□□□□□ -0.18
SNRPA1-206ENST00000558059 RIMS1Q86UR5 1692 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-206ENST00000558059 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
SNRPA1-206ENST00000558059 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
SNRPA1-206ENST00000558059 NCOA2Q15596 1464 aa13.93□□□□□ -0.18
SNRPA1-206ENST00000558059 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
SNRPA1-206ENST00000558059 ZNF644Q9H582 1327 aaPredicted RBP13.92□□□□□ -0.18
SNRPA1-206ENST00000558059 LRRC9Q6ZRR7 1453 aa13.92□□□□□ -0.18
SNRPA1-206ENST00000558059 REREQ9P2R6 1566 aa13.92□□□□□ -0.18
SNRPA1-206ENST00000558059 MAP3K1Q13233 1512 aa13.91□□□□□ -0.18
SNRPA1-206ENST00000558059 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.18
SNRPA1-206ENST00000558059 KANK4Q5T7N3 995 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-206ENST00000558059 FER1L4A9Z1Z3 1794 aa13.9□□□□□ -0.18
SNRPA1-206ENST00000558059 MBD5Q9P267 1494 aa13.89□□□□□ -0.19
SNRPA1-206ENST00000558059 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
SNRPA1-206ENST00000558059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNRPA1-206ENST00000558059 AGLP35573 1532 aa13.88□□□□□ -0.19
SNRPA1-206ENST00000558059 ATP7AQ04656 1500 aa13.86□□□□□ -0.19
SNRPA1-206ENST00000558059 INO80Q9ULG1 1556 aaPredicted RBP13.86□□□□□ -0.19
SNRPA1-206ENST00000558059 CAMSAP2Q08AD1 1489 aa13.84□□□□□ -0.19
SNRPA1-206ENST00000558059 SETD1BQ9UPS6 1966 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-206ENST00000558059 CEBPAP49715 358 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-206ENST00000558059 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
SNRPA1-206ENST00000558059 A2MP01023 1474 aa13.81□□□□□ -0.2
SNRPA1-206ENST00000558059 LMTK3Q96Q04 1460 aa13.81□□□□□ -0.2
SNRPA1-206ENST00000558059 PLXNC1O60486 1568 aa13.81□□□□□ -0.2
SNRPA1-206ENST00000558059 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
SNRPA1-206ENST00000558059 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
SNRPA1-206ENST00000558059 ADGBQ8N7X0 1667 aa13.8□□□□□ -0.2
SNRPA1-206ENST00000558059 APLP2Q06481 763 aa13.8□□□□□ -0.2
SNRPA1-206ENST00000558059 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
SNRPA1-206ENST00000558059 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
SNRPA1-206ENST00000558059 MIA2Q96PC5 1412 aa13.78□□□□□ -0.2
SNRPA1-206ENST00000558059 C3P01024 1663 aa13.78□□□□□ -0.2
SNRPA1-206ENST00000558059 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-206ENST00000558059 CNTLNQ9NXG0 1405 aa13.76□□□□□ -0.21
SNRPA1-206ENST00000558059 DHX29Q7Z478 1369 aaKnown RBP13.76□□□□□ -0.21
SNRPA1-206ENST00000558059 HSPA2P54652 639 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms