RNA–Protein interactions for RNA: ENST00000557963.1

ALDH1A3-203, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

BASIC

Gene ALDH1A3, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-203ENST00000557963 CDC42BPBQ9Y5S2 1711 aa34.64■■■■□ 3.14
ALDH1A3-203ENST00000557963 ARHGAP5Q13017 1502 aa34.64■■■■□ 3.14
ALDH1A3-203ENST00000557963 ZNF777Q9ULD5 760 aaPredicted RBP34.63■■■■□ 3.13
ALDH1A3-203ENST00000557963 ARAP3Q8WWN8 1544 aa34.61■■■■□ 3.13
ALDH1A3-203ENST00000557963 CAMSAP2Q08AD1 1489 aa34.61■■■■□ 3.13
ALDH1A3-203ENST00000557963 ZNF644Q9H582 1327 aaPredicted RBP34.6■■■■□ 3.13
ALDH1A3-203ENST00000557963 GLI2P10070 1586 aa34.6■■■■□ 3.13
ALDH1A3-203ENST00000557963 DIP2BQ9P265 1576 aa34.59■■■■□ 3.13
ALDH1A3-203ENST00000557963 CD109Q6YHK3 1445 aa34.58■■■■□ 3.13
ALDH1A3-203ENST00000557963 EFCAB2Q5VUJ9 269 aa34.56■■■■□ 3.12
ALDH1A3-203ENST00000557963 ITGAEP38570 1179 aa34.54■■■■□ 3.12
ALDH1A3-203ENST00000557963 FAM69CQ0P6D2 419 aa34.54■■■■□ 3.12
ALDH1A3-203ENST00000557963 SAMD9LQ8IVG5 1584 aa34.52■■■■□ 3.12
ALDH1A3-203ENST00000557963 MAP3K4Q9Y6R4 1608 aa34.5■■■■□ 3.11
ALDH1A3-203ENST00000557963 FANCAO15360 1455 aa34.49■■■■□ 3.11
ALDH1A3-203ENST00000557963 PLEKHH2Q8IVE3 1493 aa34.48■■■■□ 3.11
ALDH1A3-203ENST00000557963 DNMT1P26358 1616 aaKnown RBP34.44■■■■□ 3.1
ALDH1A3-203ENST00000557963 DAPK1P53355 1430 aa34.43■■■■□ 3.1
ALDH1A3-203ENST00000557963 KIAA1107Q9UPP5 1409 aa34.43■■■■□ 3.1
ALDH1A3-203ENST00000557963 SYCP2Q9BX26 1530 aa34.4■■■■□ 3.1
ALDH1A3-203ENST00000557963 ABCC5O15440 1437 aa34.4■■■■□ 3.1
ALDH1A3-203ENST00000557963 MBD5Q9P267 1494 aa34.39■■■■□ 3.1
ALDH1A3-203ENST00000557963 ABCC1P33527 1531 aa34.39■■■■□ 3.1
ALDH1A3-203ENST00000557963 HNRNPMP52272 730 aaKnown RBP eCLIP34.39■■■■□ 3.1
ALDH1A3-203ENST00000557963 CFAP74Q9C0B2 1584 aa34.39■■■■□ 3.1
ALDH1A3-203ENST00000557963 PTPRKQ15262 1439 aa34.39■■■■□ 3.1
ALDH1A3-203ENST00000557963 KIF13AQ9H1H9 1805 aa34.39■■■■□ 3.1
ALDH1A3-203ENST00000557963 ARHGEF5Q12774 1597 aa34.38■■■■□ 3.09
ALDH1A3-203ENST00000557963 RSPH4AQ5TD94 716 aa34.37■■■■□ 3.09
ALDH1A3-203ENST00000557963 AKNAQ7Z591 1439 aa34.35■■■■□ 3.09
ALDH1A3-203ENST00000557963 NEO1Q92859 1461 aa34.34■■■■□ 3.09
ALDH1A3-203ENST00000557963 ARHGEF12Q9NZN5 1544 aa34.33■■■■□ 3.09
ALDH1A3-203ENST00000557963 ADGRL1O94910 1474 aa34.33■■■■□ 3.09
ALDH1A3-203ENST00000557963 CCDC141Q6ZP82 1450 aa34.33■■■■□ 3.09
ALDH1A3-203ENST00000557963 CROCC2H7BZ55 1655 aa34.3■■■■□ 3.08
ALDH1A3-203ENST00000557963 CHIC2Q9UKJ5 165 aa34.29■■■■□ 3.08
ALDH1A3-203ENST00000557963 TEX14Q8IWB6 1497 aa34.28■■■■□ 3.08
ALDH1A3-203ENST00000557963 SHANK2Q9UPX8 1470 aa34.28■■■■□ 3.08
ALDH1A3-203ENST00000557963 SCAPERQ9BY12 1400 aa34.28■■■■□ 3.08
ALDH1A3-203ENST00000557963 TSPY4P0CV99 314 aa34.28■■■■□ 3.08
ALDH1A3-203ENST00000557963 TSPY10P0CW01 314 aa34.28■■■■□ 3.08
ALDH1A3-203ENST00000557963 PPRC1Q5VV67 1664 aaKnown RBP34.25■■■■□ 3.07
ALDH1A3-203ENST00000557963 TSPOAP1O95153 1857 aa34.25■■■■□ 3.07
ALDH1A3-203ENST00000557963 TRAPPC8Q9Y2L5 1435 aa34.24■■■■□ 3.07
ALDH1A3-203ENST00000557963 ROCK1Q13464 1354 aa34.23■■■■□ 3.07
ALDH1A3-203ENST00000557963 C9orf84Q5VXU9 1444 aa34.23■■■■□ 3.07
ALDH1A3-203ENST00000557963 TRHP20396 242 aaPredicted RBP34.2■■■■□ 3.07
ALDH1A3-203ENST00000557963 HFM1A2PYH4 1435 aa34.2■■■■□ 3.06
ALDH1A3-203ENST00000557963 ADGRL2O95490 1459 aa34.19■■■■□ 3.06
ALDH1A3-203ENST00000557963 ADGBQ8N7X0 1667 aa34.17■■■■□ 3.06
ALDH1A3-203ENST00000557963 AFAP1Q8N556 730 aa34.16■■■■□ 3.06
ALDH1A3-203ENST00000557963 ANKRD30AQ9BXX3 1397 aa34.16■■■■□ 3.06
ALDH1A3-203ENST00000557963 SETD5Q9C0A6 1442 aa34.16■■■■□ 3.06
ALDH1A3-203ENST00000557963 RRP7BPQ9NSQ0 103 aa34.16■■■■□ 3.06
ALDH1A3-203ENST00000557963 MAST1Q9Y2H9 1570 aa34.16■■■■□ 3.06
ALDH1A3-203ENST00000557963 ZNF518AQ6AHZ1 1483 aa34.15■■■■□ 3.06
ALDH1A3-203ENST00000557963 NAIPQ13075 1403 aa34.14■■■■□ 3.06
ALDH1A3-203ENST00000557963 NCOA1Q15788 1441 aa34.14■■■■□ 3.06
ALDH1A3-203ENST00000557963 POGZQ7Z3K3 1410 aa34.14■■■■□ 3.06
ALDH1A3-203ENST00000557963 DENND4BO75064 1496 aaPredicted RBP34.13■■■■□ 3.05
ALDH1A3-203ENST00000557963 SPAG9O60271 1321 aaKnown RBP34.1■■■■□ 3.05
ALDH1A3-203ENST00000557963 GCC2Q8IWJ2 1684 aa34.09■■■■□ 3.05
ALDH1A3-203ENST00000557963 RAB3GAP2Q9H2M9 1393 aa34.08■■■■□ 3.05
ALDH1A3-203ENST00000557963 RTEL1-TNFRSF6BF6WH68 1400 aa34.07■■■■□ 3.05
ALDH1A3-203ENST00000557963 KDM5CP41229 1560 aa34.05■■■■□ 3.04
ALDH1A3-203ENST00000557963 ZFYVE16Q7Z3T8 1539 aa34.04■■■■□ 3.04
ALDH1A3-203ENST00000557963 PLXNC1O60486 1568 aa34.03■■■■□ 3.04
ALDH1A3-203ENST00000557963 KIF15Q9NS87 1388 aa34.03■■■■□ 3.04
ALDH1A3-203ENST00000557963 RAPGEF3O95398 923 aa34.03■■■■□ 3.04
ALDH1A3-203ENST00000557963 INO80Q9ULG1 1556 aaPredicted RBP34.01■■■■□ 3.04
ALDH1A3-203ENST00000557963 ATP7AQ04656 1500 aa34.01■■■■□ 3.03
ALDH1A3-203ENST00000557963 HRCP23327 699 aa34■■■■□ 3.03
ALDH1A3-203ENST00000557963 RICTORQ6R327 1708 aa33.99■■■■□ 3.03
ALDH1A3-203ENST00000557963 MYT1LQ9UL68 1186 aa33.99■■■■□ 3.03
ALDH1A3-203ENST00000557963 MLH3Q9UHC1 1453 aa33.97■■■■□ 3.03
ALDH1A3-203ENST00000557963 FRMPD1Q5SYB0 1578 aa33.95■■■■□ 3.03
ALDH1A3-203ENST00000557963 HECW2Q9P2P5 1572 aa33.95■■■■□ 3.03
ALDH1A3-203ENST00000557963 ANKRD50Q9ULJ7 1429 aa33.95■■■■□ 3.03
ALDH1A3-203ENST00000557963 KIDINS220Q9ULH0 1771 aa33.92■■■■□ 3.02
ALDH1A3-203ENST00000557963 KDM6BO15054 1643 aa33.91■■■■□ 3.02
ALDH1A3-203ENST00000557963 DUOX2Q9NRD8 1548 aa33.91■■■■□ 3.02
ALDH1A3-203ENST00000557963 COL17A1Q9UMD9 1497 aaPredicted RBP33.9■■■■□ 3.02
ALDH1A3-203ENST00000557963 ZMYM4Q5VZL5 1548 aa33.9■■■■□ 3.02
ALDH1A3-203ENST00000557963 ACIN1Q9UKV3 1341 aaKnown RBP33.86■■■■□ 3.01
ALDH1A3-203ENST00000557963 ERBINQ96RT1 1412 aa33.84■■■■□ 3.01
ALDH1A3-203ENST00000557963 MAGI2Q86UL8 1455 aa33.83■■■■□ 3.01
ALDH1A3-203ENST00000557963 ABCA6Q8N139 1617 aa33.79■■■■□ 3
ALDH1A3-203ENST00000557963 CCER1Q8TC90 406 aaPredicted RBP33.78■■■■□ 3
ALDH1A3-203ENST00000557963 DHX29Q7Z478 1369 aaKnown RBP33.78■■■■□ 3
ALDH1A3-203ENST00000557963 TRIM52Q96A61 297 aa33.77■■■■□ 3
ALDH1A3-203ENST00000557963 DIP2CQ9Y2E4 1556 aa33.76■■■■□ 3
ALDH1A3-203ENST00000557963 A2MP01023 1474 aa33.76■■■■□ 3
ALDH1A3-203ENST00000557963 YEATS2Q9ULM3 1422 aa33.76■■■■□ 3
ALDH1A3-203ENST00000557963 DHX57Q6P158 1386 aaKnown RBP33.76■■■□□ 2.99
ALDH1A3-203ENST00000557963 EIF2AK4Q9P2K8 1649 aaKnown RBP33.68■■■□□ 2.98
ALDH1A3-203ENST00000557963 ATP10AO60312 1499 aa33.66■■■□□ 2.98
ALDH1A3-203ENST00000557963 ARHGEF40Q8TER5 1519 aa33.65■■■□□ 2.98
ALDH1A3-203ENST00000557963 UNC13BO14795 1591 aa33.64■■■□□ 2.98
ALDH1A3-203ENST00000557963 KIF3BO15066 747 aa33.64■■■□□ 2.98
ALDH1A3-203ENST00000557963 NUP155O75694 1391 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms