RNA–Protein interactions for RNA: ENST00000557954.1

PDE8A-207, Transcript of phosphodiesterase 8A, humanhuman

TSL 4

Gene PDE8A, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-207ENST00000557954 EMP3P54852 163 aa12.03□□□□□ -0.48
PDE8A-207ENST00000557954 KIF3CO14782 793 aa12.01□□□□□ -0.49
PDE8A-207ENST00000557954 HOXB1P14653 301 aaPredicted RBP12.01□□□□□ -0.49
PDE8A-207ENST00000557954 NKX1-1Q15270 411 aaPredicted RBP12.01□□□□□ -0.49
PDE8A-207ENST00000557954 DOK7Q18PE1 504 aa12□□□□□ -0.49
PDE8A-207ENST00000557954 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
PDE8A-207ENST00000557954 HS3ST6Q96QI5 342 aa11.99□□□□□ -0.49
PDE8A-207ENST00000557954 C2orf72A6NCS6 295 aa11.98□□□□□ -0.49
PDE8A-207ENST00000557954 ZNF710Q8N1W2 664 aa11.97□□□□□ -0.49
PDE8A-207ENST00000557954 GPR153Q6NV75 609 aa11.96□□□□□ -0.49
PDE8A-207ENST00000557954 DNAJC5Q9H3Z4 198 aa11.96□□□□□ -0.49
PDE8A-207ENST00000557954 KRTAP3-3Q9BYR6 98 aa11.92□□□□□ -0.5
PDE8A-207ENST00000557954 KRTAP3-2Q9BYR7 98 aa11.92□□□□□ -0.5
PDE8A-207ENST00000557954 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.54e-7■□□□□ 10
PDE8A-207ENST00000557954 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
PDE8A-207ENST00000557954 ZSWIM6Q9HCJ5 1215 aa11.89□□□□□ -0.51
PDE8A-207ENST00000557954 RIMBP2O15034 1052 aa11.88□□□□□ -0.51
PDE8A-207ENST00000557954 SPNS2Q8IVW8 549 aa11.86□□□□□ -0.51
PDE8A-207ENST00000557954 ERBB3P21860 1342 aa11.86□□□□□ -0.51
PDE8A-207ENST00000557954 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
PDE8A-207ENST00000557954 TMC2Q8TDI7 906 aa11.84□□□□□ -0.51
PDE8A-207ENST00000557954 GTPBP6O43824 516 aaPredicted RBP11.81□□□□□ -0.52
PDE8A-207ENST00000557954 SLC34A2O95436 690 aa11.8□□□□□ -0.52
PDE8A-207ENST00000557954 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
PDE8A-207ENST00000557954 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
PDE8A-207ENST00000557954 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
PDE8A-207ENST00000557954 NUDT7P0C024 238 aa11.77□□□□□ -0.53
PDE8A-207ENST00000557954 ZNF316A6NFI3 1004 aaPredicted RBP11.76□□□□□ -0.53
PDE8A-207ENST00000557954 DCAF8L2P0C7V8 631 aa11.76□□□□□ -0.53
PDE8A-207ENST00000557954 FOXK1P85037 733 aa11.76□□□□□ -0.53
PDE8A-207ENST00000557954 DSG2Q14126 1118 aa11.76□□□□□ -0.53
PDE8A-207ENST00000557954 PLPP6Q8IY26 295 aa11.75□□□□□ -0.53
PDE8A-207ENST00000557954 ZNF687Q8N1G0 1237 aa11.74□□□□□ -0.53
PDE8A-207ENST00000557954 KDM4FA0A1W2PPD8 638 aa11.72□□□□□ -0.53
PDE8A-207ENST00000557954 CRISPLD2Q9H0B8 497 aa11.72□□□□□ -0.53
PDE8A-207ENST00000557954 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
PDE8A-207ENST00000557954 NCKAP5LQ9HCH0 1330 aa11.7□□□□□ -0.54
PDE8A-207ENST00000557954 PTCD2Q8WV60 388 aaKnown RBP11.7□□□□□ -0.54
PDE8A-207ENST00000557954 RYDENQ9NUL5 291 aaKnown RBP11.69□□□□□ -0.54
PDE8A-207ENST00000557954 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
PDE8A-207ENST00000557954 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
PDE8A-207ENST00000557954 CADPS2Q86UW7 1296 aa11.63□□□□□ -0.55
PDE8A-207ENST00000557954 PPP1R15BQ5SWA1 713 aa11.61□□□□□ -0.55
PDE8A-207ENST00000557954 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
PDE8A-207ENST00000557954 AXIN2Q9Y2T1 843 aa11.59□□□□□ -0.55
PDE8A-207ENST00000557954 PDE4AP27815 886 aa11.58□□□□□ -0.56
PDE8A-207ENST00000557954 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
PDE8A-207ENST00000557954 AMER1Q5JTC6 1135 aaPredicted RBP11.57□□□□□ -0.56
PDE8A-207ENST00000557954 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
PDE8A-207ENST00000557954 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
PDE8A-207ENST00000557954 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
PDE8A-207ENST00000557954 MFSD10Q14728 455 aa11.54□□□□□ -0.56
PDE8A-207ENST00000557954 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
PDE8A-207ENST00000557954 TBC1D12O60347 775 aa11.51□□□□□ -0.57
PDE8A-207ENST00000557954 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
PDE8A-207ENST00000557954 PBX2P40425 430 aa11.5□□□□□ -0.57
PDE8A-207ENST00000557954 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
PDE8A-207ENST00000557954 MYT1LQ9UL68 1186 aa11.48□□□□□ -0.57
PDE8A-207ENST00000557954 PSDA5PKW4 1024 aaPredicted RBP11.47□□□□□ -0.57
PDE8A-207ENST00000557954 PSEN2P49810 448 aa11.47□□□□□ -0.57
PDE8A-207ENST00000557954 DMRTA1Q5VZB9 504 aa11.47□□□□□ -0.57
PDE8A-207ENST00000557954 RNF166Q96A37 237 aaPredicted RBP11.47□□□□□ -0.57
PDE8A-207ENST00000557954 ARHGAP33O14559 1287 aa11.46□□□□□ -0.57
PDE8A-207ENST00000557954 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
PDE8A-207ENST00000557954 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
PDE8A-207ENST00000557954 EVI5O60447 810 aa11.42□□□□□ -0.58
PDE8A-207ENST00000557954 FOSBP53539 338 aa11.41□□□□□ -0.58
PDE8A-207ENST00000557954 ADGRD1Q6QNK2 874 aa11.4□□□□□ -0.58
PDE8A-207ENST00000557954 ZNF454Q8N9F8 522 aa11.4□□□□□ -0.58
PDE8A-207ENST00000557954 PTGER2P43116 358 aa11.39□□□□□ -0.59
PDE8A-207ENST00000557954 CAMK2BQ13554 666 aa11.39□□□□□ -0.59
PDE8A-207ENST00000557954 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
PDE8A-207ENST00000557954 HRO43593 1189 aa11.37□□□□□ -0.59
PDE8A-207ENST00000557954 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
PDE8A-207ENST00000557954 KCNK17Q96T54 332 aa11.37□□□□□ -0.59
PDE8A-207ENST00000557954 PAXIP1Q6ZW49 1069 aaPredicted RBP11.35□□□□□ -0.59
PDE8A-207ENST00000557954 BCL2L12Q9HB09 334 aa11.35□□□□□ -0.59
PDE8A-207ENST00000557954 TK2O00142 265 aa11.34□□□□□ -0.59
PDE8A-207ENST00000557954 JPH4Q96JJ6 628 aa11.34□□□□□ -0.59
PDE8A-207ENST00000557954 CFAP44Q96MT7 982 aa11.33□□□□□ -0.6
PDE8A-207ENST00000557954 ADAM33Q9BZ11 813 aa11.33□□□□□ -0.6
PDE8A-207ENST00000557954 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
PDE8A-207ENST00000557954 DPYSL4O14531 572 aa11.31□□□□□ -0.6
PDE8A-207ENST00000557954 PCDHGA10Q9Y5H3 936 aa11.31□□□□□ -0.6
PDE8A-207ENST00000557954 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
PDE8A-207ENST00000557954 VPS9D1Q9Y2B5 631 aa11.29□□□□□ -0.6
PDE8A-207ENST00000557954 ZBED2Q9BTP6 218 aa11.26□□□□□ -0.61
PDE8A-207ENST00000557954 PTPREP23469 700 aa11.25□□□□□ -0.61
PDE8A-207ENST00000557954 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
PDE8A-207ENST00000557954 BHMG1C9JSJ3 638 aaPredicted RBP11.23□□□□□ -0.61
PDE8A-207ENST00000557954 PHF14O94880 888 aa11.22□□□□□ -0.61
PDE8A-207ENST00000557954 COL9A1P20849 921 aa11.22□□□□□ -0.61
PDE8A-207ENST00000557954 KCNH8Q96L42 1107 aa11.21□□□□□ -0.61
PDE8A-207ENST00000557954 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
PDE8A-207ENST00000557954 DDX12PQ92771 950 aa11.18□□□□□ -0.62
PDE8A-207ENST00000557954 KCTD12Q96CX2 325 aaKnown RBP11.18□□□□□ -0.62
PDE8A-207ENST00000557954 PROX2Q3B8N5 592 aa11.17□□□□□ -0.62
PDE8A-207ENST00000557954 PDIA6Q15084 440 aa11.16□□□□□ -0.62
PDE8A-207ENST00000557954 E2F4Q16254 413 aa11.16□□□□□ -0.62
PDE8A-207ENST00000557954 TSHZ2Q9NRE2 1034 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms