RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 CASKIN1Q8WXD9 1431 aa35.07■■■■□ 3.21
CRNDE-203ENST00000557792 LOC105371045A0A1W2PR82 267 aa35.07■■■■□ 3.2
CRNDE-203ENST00000557792 MAGI2Q86UL8 1455 aa35.07■■■■□ 3.2
CRNDE-203ENST00000557792 RIMS1Q86UR5 1692 aaKnown RBP35.07■■■■□ 3.2
CRNDE-203ENST00000557792 KIF14Q15058 1648 aa35.06■■■■□ 3.2
CRNDE-203ENST00000557792 SIGLEC1Q9BZZ2 1709 aa35.06■■■■□ 3.2
CRNDE-203ENST00000557792 POGZQ7Z3K3 1410 aa35.06■■■■□ 3.2
CRNDE-203ENST00000557792 LRRIQ1Q96JM4 1722 aa35.04■■■■□ 3.2
CRNDE-203ENST00000557792 TROQ12816 1431 aaPredicted RBP35.02■■■■□ 3.2
CRNDE-203ENST00000557792 EFCAB2Q5VUJ9 269 aa35.01■■■■□ 3.2
CRNDE-203ENST00000557792 PCF11O94913 1555 aaKnown RBP34.98■■■■□ 3.19
CRNDE-203ENST00000557792 CEP162Q5TB80 1403 aa34.95■■■■□ 3.19
CRNDE-203ENST00000557792 LMTK3Q96Q04 1460 aa34.94■■■■□ 3.18
CRNDE-203ENST00000557792 ARHGAP5Q13017 1502 aa34.91■■■■□ 3.18
CRNDE-203ENST00000557792 FYCO1Q9BQS8 1478 aa34.91■■■■□ 3.18
CRNDE-203ENST00000557792 CCDC18Q5T9S5 1454 aa34.9■■■■□ 3.18
CRNDE-203ENST00000557792 ATP10AO60312 1499 aa34.9■■■■□ 3.18
CRNDE-203ENST00000557792 MLECQ14165 292 aa34.89■■■■□ 3.18
CRNDE-203ENST00000557792 FER1L4A9Z1Z3 1794 aa34.87■■■■□ 3.17
CRNDE-203ENST00000557792 ZNF518AQ6AHZ1 1483 aa34.86■■■■□ 3.17
CRNDE-203ENST00000557792 PLPPR3Q6T4P5 718 aa34.86■■■■□ 3.17
CRNDE-203ENST00000557792 C9orf84Q5VXU9 1444 aa34.86■■■■□ 3.17
CRNDE-203ENST00000557792 CDC42BPBQ9Y5S2 1711 aa34.84■■■■□ 3.17
CRNDE-203ENST00000557792 KDM5CP41229 1560 aa34.82■■■■□ 3.16
CRNDE-203ENST00000557792 AFAP1Q8N556 730 aa34.81■■■■□ 3.16
CRNDE-203ENST00000557792 ARHGEF12Q9NZN5 1544 aa34.79■■■■□ 3.16
CRNDE-203ENST00000557792 PREX2Q70Z35 1606 aa34.77■■■■□ 3.16
CRNDE-203ENST00000557792 HSPA2P54652 639 aa34.74■■■■□ 3.15
CRNDE-203ENST00000557792 DIP2CQ9Y2E4 1556 aa34.71■■■■□ 3.15
CRNDE-203ENST00000557792 ABCC1P33527 1531 aa34.71■■■■□ 3.15
CRNDE-203ENST00000557792 MYT1LQ9UL68 1186 aa34.7■■■■□ 3.15
CRNDE-203ENST00000557792 CDC42BPAQ5VT25 1732 aa34.69■■■■□ 3.14
CRNDE-203ENST00000557792 FBXO41Q8TF61 875 aa34.68■■■■□ 3.14
CRNDE-203ENST00000557792 ITSN2Q9NZM3 1697 aa34.67■■■■□ 3.14
CRNDE-203ENST00000557792 MLH3Q9UHC1 1453 aa34.67■■■■□ 3.14
CRNDE-203ENST00000557792 TRAPPC8Q9Y2L5 1435 aa34.67■■■■□ 3.14
CRNDE-203ENST00000557792 ABCA6Q8N139 1617 aa34.66■■■■□ 3.14
CRNDE-203ENST00000557792 REREQ9P2R6 1566 aa34.65■■■■□ 3.14
CRNDE-203ENST00000557792 CEBPAP49715 358 aaPredicted RBP34.61■■■■□ 3.13
CRNDE-203ENST00000557792 MTUS2Q5JR59 1369 aa34.6■■■■□ 3.13
CRNDE-203ENST00000557792 PREX1Q8TCU6 1659 aa34.58■■■■□ 3.13
CRNDE-203ENST00000557792 KIDINS220Q9ULH0 1771 aa34.56■■■■□ 3.12
CRNDE-203ENST00000557792 AGLP35573 1532 aa34.54■■■■□ 3.12
CRNDE-203ENST00000557792 VPS8Q8N3P4 1428 aa34.54■■■■□ 3.12
CRNDE-203ENST00000557792 SAMD9LQ8IVG5 1584 aa34.53■■■■□ 3.12
CRNDE-203ENST00000557792 GPATCH8Q9UKJ3 1502 aaKnown RBP34.52■■■■□ 3.12
CRNDE-203ENST00000557792 ZNF777Q9ULD5 760 aaPredicted RBP34.51■■■■□ 3.12
CRNDE-203ENST00000557792 SETD1BQ9UPS6 1966 aaKnown RBP34.48■■■■□ 3.11
CRNDE-203ENST00000557792 SYCP2Q9BX26 1530 aa34.47■■■■□ 3.11
CRNDE-203ENST00000557792 CCNB3Q8WWL7 1395 aa34.47■■■■□ 3.11
CRNDE-203ENST00000557792 C3P01024 1663 aa34.46■■■■□ 3.11
CRNDE-203ENST00000557792 CFDP1Q9UEE9 299 aaPredicted RBP34.44■■■■□ 3.1
CRNDE-203ENST00000557792 UHRF1BP1Q6BDS2 1440 aa34.42■■■■□ 3.1
CRNDE-203ENST00000557792 HNRNPMP52272 730 aaKnown RBP eCLIP34.41■■■■□ 3.1
CRNDE-203ENST00000557792 ESF1Q9H501 851 aaKnown RBP34.41■■■■□ 3.1
CRNDE-203ENST00000557792 EHBP1L1Q8N3D4 1523 aa34.4■■■■□ 3.1
CRNDE-203ENST00000557792 SPAG9O60271 1321 aaKnown RBP34.39■■■■□ 3.1
CRNDE-203ENST00000557792 KIAA1107Q9UPP5 1409 aa34.38■■■■□ 3.09
CRNDE-203ENST00000557792 STRCQ7RTU9 1775 aa34.37■■■■□ 3.09
CRNDE-203ENST00000557792 PLEKHH2Q8IVE3 1493 aa34.36■■■■□ 3.09
CRNDE-203ENST00000557792 TIAM1Q13009 1591 aa34.35■■■■□ 3.09
CRNDE-203ENST00000557792 ATP7AQ04656 1500 aa34.34■■■■□ 3.09
CRNDE-203ENST00000557792 CNTLNQ9NXG0 1405 aa34.33■■■■□ 3.09
CRNDE-203ENST00000557792 CERKQ8TCT0 537 aa34.33■■■■□ 3.09
CRNDE-203ENST00000557792 SUPT6HQ7KZ85 1726 aaKnown RBP34.32■■■■□ 3.08
CRNDE-203ENST00000557792 INO80Q9ULG1 1556 aaPredicted RBP34.32■■■■□ 3.08
CRNDE-203ENST00000557792 KANK4Q5T7N3 995 aaPredicted RBP34.31■■■■□ 3.08
CRNDE-203ENST00000557792 ZNF644Q9H582 1327 aaPredicted RBP34.3■■■■□ 3.08
CRNDE-203ENST00000557792 NCOA2Q15596 1464 aa34.28■■■■□ 3.08
CRNDE-203ENST00000557792 LRRC9Q6ZRR7 1453 aa34.27■■■■□ 3.08
CRNDE-203ENST00000557792 DMRT2Q9Y5R5 561 aa34.27■■■■□ 3.08
CRNDE-203ENST00000557792 MROH2AA6NES4 1674 aa34.26■■■■□ 3.08
CRNDE-203ENST00000557792 MAP3K1Q13233 1512 aa34.25■■■■□ 3.07
CRNDE-203ENST00000557792 PLXNC1O60486 1568 aa34.25■■■■□ 3.07
CRNDE-203ENST00000557792 A2MP01023 1474 aa34.24■■■■□ 3.07
CRNDE-203ENST00000557792 ZMYM3Q14202 1370 aa34.19■■■■□ 3.06
CRNDE-203ENST00000557792 APLP2Q06481 763 aa34.18■■■■□ 3.06
CRNDE-203ENST00000557792 NPATQ14207 1427 aa34.18■■■■□ 3.06
CRNDE-203ENST00000557792 CLTCQ00610 1675 aaKnown RBP34.17■■■■□ 3.06
CRNDE-203ENST00000557792 MBD5Q9P267 1494 aa34.17■■■■□ 3.06
CRNDE-203ENST00000557792 ADGBQ8N7X0 1667 aa34.16■■■■□ 3.06
CRNDE-203ENST00000557792 PTPRTO14522 1441 aa34.14■■■■□ 3.06
CRNDE-203ENST00000557792 NCOA1Q15788 1441 aa34.11■■■■□ 3.05
CRNDE-203ENST00000557792 GGT6Q6P531 493 aa34.1■■■■□ 3.05
CRNDE-203ENST00000557792 RTEL1-TNFRSF6BF6WH68 1400 aa34.07■■■■□ 3.04
CRNDE-203ENST00000557792 CAMSAP1Q5T5Y3 1602 aa34.05■■■■□ 3.04
CRNDE-203ENST00000557792 CAMSAP2Q08AD1 1489 aa34.03■■■■□ 3.04
CRNDE-203ENST00000557792 PTPRKQ15262 1439 aa34.03■■■■□ 3.04
CRNDE-203ENST00000557792 RSPH4AQ5TD94 716 aa34.02■■■■□ 3.04
CRNDE-203ENST00000557792 PPP6R1Q9UPN7 881 aa34.02■■■■□ 3.04
CRNDE-203ENST00000557792 MYO3AQ8NEV4 1616 aa34.01■■■■□ 3.04
CRNDE-203ENST00000557792 DHX29Q7Z478 1369 aaKnown RBP34■■■■□ 3.03
CRNDE-203ENST00000557792 CCDC141Q6ZP82 1450 aa34■■■■□ 3.03
CRNDE-203ENST00000557792 ZNF142P52746 1687 aaPredicted RBP33.99■■■■□ 3.03
CRNDE-203ENST00000557792 MYOM3Q5VTT5 1437 aa33.97■■■■□ 3.03
CRNDE-203ENST00000557792 LTBP4Q8N2S1 1624 aa33.97■■■■□ 3.03
CRNDE-203ENST00000557792 CEP170BQ9Y4F5 1589 aaPredicted RBP33.95■■■■□ 3.03
CRNDE-203ENST00000557792 MIA2Q96PC5 1412 aa33.94■■■■□ 3.02
CRNDE-203ENST00000557792 NCKAP5LQ9HCH0 1330 aa33.92■■■■□ 3.02
CRNDE-203ENST00000557792 TSPY4P0CV99 314 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms