RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
LINC00648-204ENST00000557749 NUP153P49790 1475 aaKnown RBP18.61■□□□□ 0.57
LINC00648-204ENST00000557749 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
LINC00648-204ENST00000557749 PHLDB1Q86UU1 1377 aa18.58■□□□□ 0.57
LINC00648-204ENST00000557749 PLEKHD1A6NEE1 506 aa18.57■□□□□ 0.56
LINC00648-204ENST00000557749 ABCA9Q8IUA7 1624 aa18.56■□□□□ 0.56
LINC00648-204ENST00000557749 ARID3CA6NKF2 412 aa18.55■□□□□ 0.56
LINC00648-204ENST00000557749 ARHGAP35Q9NRY4 1499 aa18.54■□□□□ 0.56
LINC00648-204ENST00000557749 HECW1Q76N89 1606 aa18.54■□□□□ 0.56
LINC00648-204ENST00000557749 CDK11AQ9UQ88 783 aaPredicted RBP18.53■□□□□ 0.56
LINC00648-204ENST00000557749 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
LINC00648-204ENST00000557749 NEO1Q92859 1461 aa18.49■□□□□ 0.55
LINC00648-204ENST00000557749 ARAP3Q8WWN8 1544 aa18.48■□□□□ 0.55
LINC00648-204ENST00000557749 CFAP74Q9C0B2 1584 aa18.45■□□□□ 0.54
LINC00648-204ENST00000557749 COL17A1Q9UMD9 1497 aaPredicted RBP18.45■□□□□ 0.54
LINC00648-204ENST00000557749 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
LINC00648-204ENST00000557749 CCDC18Q5T9S5 1454 aa18.43■□□□□ 0.54
LINC00648-204ENST00000557749 CLIP1P30622 1438 aa18.42■□□□□ 0.54
LINC00648-204ENST00000557749 CDK13Q14004 1512 aaKnown RBP18.41■□□□□ 0.54
LINC00648-204ENST00000557749 CASKIN1Q8WXD9 1431 aa18.4■□□□□ 0.54
LINC00648-204ENST00000557749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00648-204ENST00000557749 FYCO1Q9BQS8 1478 aa18.38■□□□□ 0.53
LINC00648-204ENST00000557749 FANCAO15360 1455 aa18.37■□□□□ 0.53
LINC00648-204ENST00000557749 KIF14Q15058 1648 aa18.37■□□□□ 0.53
LINC00648-204ENST00000557749 TROQ12816 1431 aaPredicted RBP18.36■□□□□ 0.53
LINC00648-204ENST00000557749 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
LINC00648-204ENST00000557749 TTC37Q6PGP7 1564 aa18.34■□□□□ 0.53
LINC00648-204ENST00000557749 DENND4BO75064 1496 aaPredicted RBP18.33■□□□□ 0.52
LINC00648-204ENST00000557749 PLCH2O75038 1416 aa18.32■□□□□ 0.52
LINC00648-204ENST00000557749 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
LINC00648-204ENST00000557749 ADGRL1O94910 1474 aa18.31■□□□□ 0.52
LINC00648-204ENST00000557749 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
LINC00648-204ENST00000557749 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
LINC00648-204ENST00000557749 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
LINC00648-204ENST00000557749 MAGI2Q86UL8 1455 aa18.26■□□□□ 0.51
LINC00648-204ENST00000557749 RAPGEF3O95398 923 aa18.26■□□□□ 0.51
LINC00648-204ENST00000557749 CEP162Q5TB80 1403 aa18.25■□□□□ 0.51
LINC00648-204ENST00000557749 ZMYM4Q5VZL5 1548 aa18.24■□□□□ 0.51
LINC00648-204ENST00000557749 LRRIQ1Q96JM4 1722 aa18.24■□□□□ 0.51
LINC00648-204ENST00000557749 FRMPD1Q5SYB0 1578 aa18.24■□□□□ 0.51
LINC00648-204ENST00000557749 RICTORQ6R327 1708 aa18.23■□□□□ 0.51
LINC00648-204ENST00000557749 ARHGAP5Q13017 1502 aa18.23■□□□□ 0.51
LINC00648-204ENST00000557749 ARHGEF40Q8TER5 1519 aa18.22■□□□□ 0.51
LINC00648-204ENST00000557749 POGZQ7Z3K3 1410 aa18.21■□□□□ 0.51
LINC00648-204ENST00000557749 SCAPERQ9BY12 1400 aa18.21■□□□□ 0.51
LINC00648-204ENST00000557749 ZNF518AQ6AHZ1 1483 aa18.19■□□□□ 0.5
LINC00648-204ENST00000557749 ZFYVE16Q7Z3T8 1539 aa18.18■□□□□ 0.5
LINC00648-204ENST00000557749 PREX2Q70Z35 1606 aa18.18■□□□□ 0.5
LINC00648-204ENST00000557749 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
LINC00648-204ENST00000557749 FKBP8Q14318 412 aa18.15■□□□□ 0.5
LINC00648-204ENST00000557749 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
LINC00648-204ENST00000557749 EHBP1L1Q8N3D4 1523 aa18.13■□□□□ 0.49
LINC00648-204ENST00000557749 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
LINC00648-204ENST00000557749 SPDYE4A6NLX3 237 aa18.12■□□□□ 0.49
LINC00648-204ENST00000557749 PLEKHH2Q8IVE3 1493 aa18.11■□□□□ 0.49
LINC00648-204ENST00000557749 KDM5CP41229 1560 aa18.11■□□□□ 0.49
LINC00648-204ENST00000557749 ABCC1P33527 1531 aa18.1■□□□□ 0.49
LINC00648-204ENST00000557749 CCNB3Q8WWL7 1395 aa18.1■□□□□ 0.49
LINC00648-204ENST00000557749 SPDYE2BA6NHP3 402 aa18.1■□□□□ 0.49
LINC00648-204ENST00000557749 SPDYE6P0CI01 402 aa18.1■□□□□ 0.49
LINC00648-204ENST00000557749 SPDYE2Q495Y8 402 aa18.1■□□□□ 0.49
LINC00648-204ENST00000557749 BCORL1Q5H9F3 1711 aa18.09■□□□□ 0.49
LINC00648-204ENST00000557749 CDC42BPAQ5VT25 1732 aa18.09■□□□□ 0.49
LINC00648-204ENST00000557749 ADAMTSL3P82987 1691 aa18.09■□□□□ 0.49
LINC00648-204ENST00000557749 ATP10AO60312 1499 aa18.08■□□□□ 0.49
LINC00648-204ENST00000557749 C9orf84Q5VXU9 1444 aa18.08■□□□□ 0.49
LINC00648-204ENST00000557749 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.49
LINC00648-204ENST00000557749 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.48
LINC00648-204ENST00000557749 SSUH2Q9Y2M2 353 aa18.07■□□□□ 0.48
LINC00648-204ENST00000557749 GPATCH8Q9UKJ3 1502 aaKnown RBP18.07■□□□□ 0.48
LINC00648-204ENST00000557749 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
LINC00648-204ENST00000557749 YEATS2Q9ULM3 1422 aa18.06■□□□□ 0.48
LINC00648-204ENST00000557749 CFDP1Q9UEE9 299 aaPredicted RBP18.06■□□□□ 0.48
LINC00648-204ENST00000557749 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
LINC00648-204ENST00000557749 ITSN2Q9NZM3 1697 aa18.06■□□□□ 0.48
LINC00648-204ENST00000557749 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
LINC00648-204ENST00000557749 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
LINC00648-204ENST00000557749 PTPRMP28827 1452 aa18.03■□□□□ 0.48
LINC00648-204ENST00000557749 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
LINC00648-204ENST00000557749 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
LINC00648-204ENST00000557749 AFAP1Q8N556 730 aa18.02■□□□□ 0.48
LINC00648-204ENST00000557749 MAP3K1Q13233 1512 aa18.02■□□□□ 0.47
LINC00648-204ENST00000557749 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
LINC00648-204ENST00000557749 TIAM1Q13009 1591 aa18.01■□□□□ 0.47
LINC00648-204ENST00000557749 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
LINC00648-204ENST00000557749 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
LINC00648-204ENST00000557749 MADDQ8WXG6 1647 aa18.01■□□□□ 0.47
LINC00648-204ENST00000557749 SAMD9LQ8IVG5 1584 aa18■□□□□ 0.47
LINC00648-204ENST00000557749 TRAPPC8Q9Y2L5 1435 aa17.99■□□□□ 0.47
LINC00648-204ENST00000557749 SYCP2Q9BX26 1530 aa17.98■□□□□ 0.47
LINC00648-204ENST00000557749 DIP2CQ9Y2E4 1556 aa17.97■□□□□ 0.47
LINC00648-204ENST00000557749 PROM2Q8N271 834 aa17.97■□□□□ 0.47
LINC00648-204ENST00000557749 ARHGEF12Q9NZN5 1544 aa17.97■□□□□ 0.47
LINC00648-204ENST00000557749 SPAG9O60271 1321 aaKnown RBP17.97■□□□□ 0.47
LINC00648-204ENST00000557749 AGLP35573 1532 aa17.96■□□□□ 0.47
LINC00648-204ENST00000557749 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
LINC00648-204ENST00000557749 RSPH4AQ5TD94 716 aa17.95■□□□□ 0.46
LINC00648-204ENST00000557749 RIMS1Q86UR5 1692 aaKnown RBP17.95■□□□□ 0.46
LINC00648-204ENST00000557749 LRRC9Q6ZRR7 1453 aa17.95■□□□□ 0.46
LINC00648-204ENST00000557749 FER1L4A9Z1Z3 1794 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms