RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 YEATS2Q9ULM3 1422 aa37.79■■■■□ 3.64
RIPK3-207ENST00000557662 CASKIN1Q8WXD9 1431 aa37.78■■■■□ 3.64
RIPK3-207ENST00000557662 SCAPERQ9BY12 1400 aa37.78■■■■□ 3.64
RIPK3-207ENST00000557662 CDK11AQ9UQ88 783 aaPredicted RBP37.77■■■■□ 3.64
RIPK3-207ENST00000557662 CDC42BPBQ9Y5S2 1711 aa37.77■■■■□ 3.64
RIPK3-207ENST00000557662 ATP1B4Q9UN42 357 aaPredicted RBP37.75■■■■□ 3.63
RIPK3-207ENST00000557662 RIMS1Q86UR5 1692 aaKnown RBP37.73■■■■□ 3.63
RIPK3-207ENST00000557662 CCDC18Q5T9S5 1454 aa37.73■■■■□ 3.63
RIPK3-207ENST00000557662 CLIP1P30622 1438 aa37.7■■■■□ 3.63
RIPK3-207ENST00000557662 PREX2Q70Z35 1606 aa37.69■■■■□ 3.62
RIPK3-207ENST00000557662 KDM5CP41229 1560 aa37.69■■■■□ 3.62
RIPK3-207ENST00000557662 FYCO1Q9BQS8 1478 aa37.67■■■■□ 3.62
RIPK3-207ENST00000557662 EFCAB2Q5VUJ9 269 aa37.67■■■■□ 3.62
RIPK3-207ENST00000557662 ARID4BQ4LE39 1312 aaPredicted RBP37.65■■■■□ 3.62
RIPK3-207ENST00000557662 ARHGAP5Q13017 1502 aa37.65■■■■□ 3.62
RIPK3-207ENST00000557662 CDC42BPAQ5VT25 1732 aa37.62■■■■□ 3.61
RIPK3-207ENST00000557662 ZNF518AQ6AHZ1 1483 aa37.61■■■■□ 3.61
RIPK3-207ENST00000557662 FER1L4A9Z1Z3 1794 aa37.6■■■■□ 3.61
RIPK3-207ENST00000557662 ATP10AO60312 1499 aa37.58■■■■□ 3.61
RIPK3-207ENST00000557662 LMTK3Q96Q04 1460 aa37.56■■■■□ 3.6
RIPK3-207ENST00000557662 ABCC1P33527 1531 aa37.56■■■■□ 3.6
RIPK3-207ENST00000557662 C9orf84Q5VXU9 1444 aa37.54■■■■□ 3.6
RIPK3-207ENST00000557662 ITSN2Q9NZM3 1697 aa37.54■■■■□ 3.6
RIPK3-207ENST00000557662 ARHGEF12Q9NZN5 1544 aa37.54■■■■□ 3.6
RIPK3-207ENST00000557662 REREQ9P2R6 1566 aa37.51■■■■□ 3.59
RIPK3-207ENST00000557662 DIP2CQ9Y2E4 1556 aa37.51■■■■□ 3.59
RIPK3-207ENST00000557662 ABCA6Q8N139 1617 aa37.47■■■■□ 3.59
RIPK3-207ENST00000557662 MLH3Q9UHC1 1453 aa37.45■■■■□ 3.59
RIPK3-207ENST00000557662 ILDR1Q86SU0 546 aaPredicted RBP37.44■■■■□ 3.58
RIPK3-207ENST00000557662 AFAP1Q8N556 730 aa37.43■■■■□ 3.58
RIPK3-207ENST00000557662 KIDINS220Q9ULH0 1771 aa37.4■■■■□ 3.58
RIPK3-207ENST00000557662 TRAPPC8Q9Y2L5 1435 aa37.4■■■■□ 3.58
RIPK3-207ENST00000557662 SAMD9LQ8IVG5 1584 aa37.38■■■■□ 3.57
RIPK3-207ENST00000557662 GPATCH8Q9UKJ3 1502 aaKnown RBP37.35■■■■□ 3.57
RIPK3-207ENST00000557662 AGLP35573 1532 aa37.32■■■■□ 3.57
RIPK3-207ENST00000557662 MLECQ14165 292 aa37.31■■■■□ 3.56
RIPK3-207ENST00000557662 PREX1Q8TCU6 1659 aa37.28■■■■□ 3.56
RIPK3-207ENST00000557662 SYCP2Q9BX26 1530 aa37.26■■■■□ 3.55
RIPK3-207ENST00000557662 SETD1BQ9UPS6 1966 aaKnown RBP37.22■■■■□ 3.55
RIPK3-207ENST00000557662 CEP162Q5TB80 1403 aa37.2■■■■□ 3.55
RIPK3-207ENST00000557662 C3P01024 1663 aa37.19■■■■□ 3.54
RIPK3-207ENST00000557662 INO80Q9ULG1 1556 aaPredicted RBP37.18■■■■□ 3.54
RIPK3-207ENST00000557662 KIAA1107Q9UPP5 1409 aa37.18■■■■□ 3.54
RIPK3-207ENST00000557662 TIAM1Q13009 1591 aa37.17■■■■□ 3.54
RIPK3-207ENST00000557662 EHBP1L1Q8N3D4 1523 aa37.17■■■■□ 3.54
RIPK3-207ENST00000557662 PLEKHH2Q8IVE3 1493 aa37.13■■■■□ 3.54
RIPK3-207ENST00000557662 HSPA2P54652 639 aa37.13■■■■□ 3.53
RIPK3-207ENST00000557662 MTUS2Q5JR59 1369 aa37.12■■■■□ 3.53
RIPK3-207ENST00000557662 PLPPR3Q6T4P5 718 aa37.11■■■■□ 3.53
RIPK3-207ENST00000557662 ATP7AQ04656 1500 aa37.1■■■■□ 3.53
RIPK3-207ENST00000557662 PLXNC1O60486 1568 aa37.1■■■■□ 3.53
RIPK3-207ENST00000557662 CCNB3Q8WWL7 1395 aa37.09■■■■□ 3.53
RIPK3-207ENST00000557662 MYT1LQ9UL68 1186 aa37.08■■■■□ 3.53
RIPK3-207ENST00000557662 CEBPAP49715 358 aaPredicted RBP37.07■■■■□ 3.52
RIPK3-207ENST00000557662 MROH2AA6NES4 1674 aa37.05■■■■□ 3.52
RIPK3-207ENST00000557662 ZNF777Q9ULD5 760 aaPredicted RBP37.05■■■■□ 3.52
RIPK3-207ENST00000557662 STRCQ7RTU9 1775 aa37.04■■■■□ 3.52
RIPK3-207ENST00000557662 CFDP1Q9UEE9 299 aaPredicted RBP37.04■■■■□ 3.52
RIPK3-207ENST00000557662 SUPT6HQ7KZ85 1726 aaKnown RBP37.04■■■■□ 3.52
RIPK3-207ENST00000557662 HNRNPMP52272 730 aaKnown RBP eCLIP37.03■■■■□ 3.52
RIPK3-207ENST00000557662 SPAG9O60271 1321 aaKnown RBP37■■■■□ 3.51
RIPK3-207ENST00000557662 MBD5Q9P267 1494 aa37■■■■□ 3.51
RIPK3-207ENST00000557662 ADGBQ8N7X0 1667 aa36.99■■■■□ 3.51
RIPK3-207ENST00000557662 CNTLNQ9NXG0 1405 aa36.98■■■■□ 3.51
RIPK3-207ENST00000557662 FBXO41Q8TF61 875 aa36.97■■■■□ 3.51
RIPK3-207ENST00000557662 UHRF1BP1Q6BDS2 1440 aa36.95■■■■□ 3.51
RIPK3-207ENST00000557662 A2MP01023 1474 aa36.93■■■■□ 3.5
RIPK3-207ENST00000557662 ZNF644Q9H582 1327 aaPredicted RBP36.9■■■■□ 3.5
RIPK3-207ENST00000557662 NCOA2Q15596 1464 aa36.9■■■■□ 3.5
RIPK3-207ENST00000557662 CLTCQ00610 1675 aaKnown RBP36.88■■■■□ 3.49
RIPK3-207ENST00000557662 RTEL1-TNFRSF6BF6WH68 1400 aa36.85■■■■□ 3.49
RIPK3-207ENST00000557662 VPS8Q8N3P4 1428 aa36.85■■■■□ 3.49
RIPK3-207ENST00000557662 NPATQ14207 1427 aa36.84■■■■□ 3.49
RIPK3-207ENST00000557662 CAMSAP2Q08AD1 1489 aa36.81■■■■□ 3.48
RIPK3-207ENST00000557662 ESF1Q9H501 851 aaKnown RBP36.79■■■■□ 3.48
RIPK3-207ENST00000557662 ZMYM3Q14202 1370 aa36.77■■■■□ 3.48
RIPK3-207ENST00000557662 CCDC141Q6ZP82 1450 aa36.76■■■■□ 3.48
RIPK3-207ENST00000557662 LRRC9Q6ZRR7 1453 aa36.76■■■■□ 3.48
RIPK3-207ENST00000557662 ARHGEF5Q12774 1597 aa36.76■■■■□ 3.48
RIPK3-207ENST00000557662 ZNF142P52746 1687 aaPredicted RBP36.76■■■■□ 3.47
RIPK3-207ENST00000557662 MAP3K1Q13233 1512 aa36.75■■■■□ 3.47
RIPK3-207ENST00000557662 LOC105371045A0A1W2PR82 267 aa36.75■■■■□ 3.47
RIPK3-207ENST00000557662 MYO3AQ8NEV4 1616 aa36.71■■■■□ 3.47
RIPK3-207ENST00000557662 PTPRTO14522 1441 aa36.69■■■■□ 3.46
RIPK3-207ENST00000557662 PTPRKQ15262 1439 aa36.68■■■■□ 3.46
RIPK3-207ENST00000557662 NCOA1Q15788 1441 aa36.68■■■■□ 3.46
RIPK3-207ENST00000557662 DHX29Q7Z478 1369 aaKnown RBP36.68■■■■□ 3.46
RIPK3-207ENST00000557662 CERKQ8TCT0 537 aa36.66■■■■□ 3.46
RIPK3-207ENST00000557662 PPP6R1Q9UPN7 881 aa36.66■■■■□ 3.46
RIPK3-207ENST00000557662 DMRT2Q9Y5R5 561 aa36.66■■■■□ 3.46
RIPK3-207ENST00000557662 FAM135AQ9P2D6 1515 aa36.63■■■■□ 3.45
RIPK3-207ENST00000557662 CAMSAP1Q5T5Y3 1602 aa36.63■■■■□ 3.45
RIPK3-207ENST00000557662 RSPH4AQ5TD94 716 aa36.62■■■■□ 3.45
RIPK3-207ENST00000557662 MAST1Q9Y2H9 1570 aa36.61■■■■□ 3.45
RIPK3-207ENST00000557662 GGT6Q6P531 493 aa36.6■■■■□ 3.45
RIPK3-207ENST00000557662 CEP170BQ9Y4F5 1589 aaPredicted RBP36.6■■■■□ 3.45
RIPK3-207ENST00000557662 LTBP4Q8N2S1 1624 aa36.55■■■■□ 3.44
RIPK3-207ENST00000557662 KDM5DQ9BY66 1539 aa36.54■■■■□ 3.44
RIPK3-207ENST00000557662 KANK4Q5T7N3 995 aaPredicted RBP36.53■■■■□ 3.44
RIPK3-207ENST00000557662 PLA2R1Q13018 1463 aa36.53■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms