RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 DCAF8L1A6NGE4 600 aa19.96■□□□□ 0.79
SLIRP-211ENST00000557623 TTC37Q6PGP7 1564 aa19.95■□□□□ 0.78
SLIRP-211ENST00000557623 PHLDB1Q86UU1 1377 aa19.95■□□□□ 0.78
SLIRP-211ENST00000557623 CFAP74Q9C0B2 1584 aa19.94■□□□□ 0.78
SLIRP-211ENST00000557623 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
SLIRP-211ENST00000557623 NEO1Q92859 1461 aa19.92■□□□□ 0.78
SLIRP-211ENST00000557623 COL17A1Q9UMD9 1497 aaPredicted RBP19.91■□□□□ 0.78
SLIRP-211ENST00000557623 ARAP3Q8WWN8 1544 aa19.9■□□□□ 0.78
SLIRP-211ENST00000557623 FANCAO15360 1455 aa19.86■□□□□ 0.77
SLIRP-211ENST00000557623 VPS8Q8N3P4 1428 aa19.86■□□□□ 0.77
SLIRP-211ENST00000557623 PLCH2O75038 1416 aa19.85■□□□□ 0.77
SLIRP-211ENST00000557623 AKNAQ7Z591 1439 aa19.83■□□□□ 0.76
SLIRP-211ENST00000557623 CDC42BPBQ9Y5S2 1711 aa19.81■□□□□ 0.76
SLIRP-211ENST00000557623 MTUS2Q5JR59 1369 aa19.81■□□□□ 0.76
SLIRP-211ENST00000557623 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
SLIRP-211ENST00000557623 CDC42BPAQ5VT25 1732 aa19.8■□□□□ 0.76
SLIRP-211ENST00000557623 EFCAB2Q5VUJ9 269 aa19.79■□□□□ 0.76
SLIRP-211ENST00000557623 ARHGAP5Q13017 1502 aa19.79■□□□□ 0.76
SLIRP-211ENST00000557623 EHBP1L1Q8N3D4 1523 aa19.79■□□□□ 0.76
SLIRP-211ENST00000557623 RICTORQ6R327 1708 aa19.78■□□□□ 0.76
SLIRP-211ENST00000557623 TIAM1Q13009 1591 aa19.78■□□□□ 0.76
SLIRP-211ENST00000557623 DENND4BO75064 1496 aaPredicted RBP19.77■□□□□ 0.76
SLIRP-211ENST00000557623 FRMPD1Q5SYB0 1578 aa19.75■□□□□ 0.75
SLIRP-211ENST00000557623 ADGRL1O94910 1474 aa19.75■□□□□ 0.75
SLIRP-211ENST00000557623 RAPGEF3O95398 923 aa19.74■□□□□ 0.75
SLIRP-211ENST00000557623 MAP3K1Q13233 1512 aa19.74■□□□□ 0.75
SLIRP-211ENST00000557623 SUPT6HQ7KZ85 1726 aaKnown RBP19.73■□□□□ 0.75
SLIRP-211ENST00000557623 ITSN2Q9NZM3 1697 aa19.71■□□□□ 0.75
SLIRP-211ENST00000557623 SCAPERQ9BY12 1400 aa19.71■□□□□ 0.75
SLIRP-211ENST00000557623 ZMYM4Q5VZL5 1548 aa19.69■□□□□ 0.74
SLIRP-211ENST00000557623 GPATCH8Q9UKJ3 1502 aaKnown RBP19.69■□□□□ 0.74
SLIRP-211ENST00000557623 CCNB3Q8WWL7 1395 aa19.69■□□□□ 0.74
SLIRP-211ENST00000557623 POGZQ7Z3K3 1410 aa19.68■□□□□ 0.74
SLIRP-211ENST00000557623 LRRC9Q6ZRR7 1453 aa19.67■□□□□ 0.74
SLIRP-211ENST00000557623 APLP2Q06481 763 aa19.67■□□□□ 0.74
SLIRP-211ENST00000557623 ABCC1P33527 1531 aa19.66■□□□□ 0.74
SLIRP-211ENST00000557623 ZNF518AQ6AHZ1 1483 aa19.65■□□□□ 0.74
SLIRP-211ENST00000557623 MAGI2Q86UL8 1455 aa19.65■□□□□ 0.74
SLIRP-211ENST00000557623 ARHGEF40Q8TER5 1519 aa19.64■□□□□ 0.73
SLIRP-211ENST00000557623 SAMD9LQ8IVG5 1584 aa19.63■□□□□ 0.73
SLIRP-211ENST00000557623 NCOA2Q15596 1464 aa19.63■□□□□ 0.73
SLIRP-211ENST00000557623 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
SLIRP-211ENST00000557623 ZFYVE16Q7Z3T8 1539 aa19.62■□□□□ 0.73
SLIRP-211ENST00000557623 KDM5CP41229 1560 aa19.61■□□□□ 0.73
SLIRP-211ENST00000557623 PLEKHH2Q8IVE3 1493 aa19.61■□□□□ 0.73
SLIRP-211ENST00000557623 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
SLIRP-211ENST00000557623 HECW2Q9P2P5 1572 aa19.58■□□□□ 0.73
SLIRP-211ENST00000557623 ARHGEF12Q9NZN5 1544 aa19.58■□□□□ 0.73
SLIRP-211ENST00000557623 SYCP2Q9BX26 1530 aa19.57■□□□□ 0.72
SLIRP-211ENST00000557623 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
SLIRP-211ENST00000557623 KIAA1107Q9UPP5 1409 aa19.57■□□□□ 0.72
SLIRP-211ENST00000557623 KDM4FA0A1W2PPD8 638 aa19.56■□□□□ 0.72
SLIRP-211ENST00000557623 AFAP1Q8N556 730 aa19.56■□□□□ 0.72
SLIRP-211ENST00000557623 YEATS2Q9ULM3 1422 aa19.55■□□□□ 0.72
SLIRP-211ENST00000557623 TRAPPC8Q9Y2L5 1435 aa19.55■□□□□ 0.72
SLIRP-211ENST00000557623 MLH3Q9UHC1 1453 aa19.54■□□□□ 0.72
SLIRP-211ENST00000557623 MYT1LQ9UL68 1186 aa19.53■□□□□ 0.72
SLIRP-211ENST00000557623 SLC4A1APQ9BWU0 796 aaKnown RBP19.52■□□□□ 0.72
SLIRP-211ENST00000557623 ATP10AO60312 1499 aa19.52■□□□□ 0.72
SLIRP-211ENST00000557623 BCORL1Q5H9F3 1711 aa19.51■□□□□ 0.71
SLIRP-211ENST00000557623 HNRNPMP52272 730 aaKnown RBP eCLIP19.51■□□□□ 0.715e-9■■■■■ 34.7
SLIRP-211ENST00000557623 KIDINS220Q9ULH0 1771 aa19.51■□□□□ 0.71
SLIRP-211ENST00000557623 C9orf84Q5VXU9 1444 aa19.51■□□□□ 0.71
SLIRP-211ENST00000557623 ARID4BQ4LE39 1312 aaPredicted RBP19.51■□□□□ 0.71
SLIRP-211ENST00000557623 DIP2CQ9Y2E4 1556 aa19.49■□□□□ 0.71
SLIRP-211ENST00000557623 CAMSAP2Q08AD1 1489 aa19.48■□□□□ 0.71
SLIRP-211ENST00000557623 ABCA6Q8N139 1617 aa19.48■□□□□ 0.71
SLIRP-211ENST00000557623 ADAMTSL3P82987 1691 aa19.48■□□□□ 0.71
SLIRP-211ENST00000557623 MYOM3Q5VTT5 1437 aa19.48■□□□□ 0.71
SLIRP-211ENST00000557623 REREQ9P2R6 1566 aa19.48■□□□□ 0.71
SLIRP-211ENST00000557623 ZNF644Q9H582 1327 aaPredicted RBP19.48■□□□□ 0.71
SLIRP-211ENST00000557623 MIA2Q96PC5 1412 aa19.47■□□□□ 0.71
SLIRP-211ENST00000557623 SIGLEC1Q9BZZ2 1709 aa19.47■□□□□ 0.71
SLIRP-211ENST00000557623 SPAG9O60271 1321 aaKnown RBP19.47■□□□□ 0.71
SLIRP-211ENST00000557623 RSPH4AQ5TD94 716 aa19.46■□□□□ 0.71
SLIRP-211ENST00000557623 MBD5Q9P267 1494 aa19.46■□□□□ 0.71
SLIRP-211ENST00000557623 INO80Q9ULG1 1556 aaPredicted RBP19.45■□□□□ 0.7
SLIRP-211ENST00000557623 ATP7AQ04656 1500 aa19.45■□□□□ 0.7
SLIRP-211ENST00000557623 ARHGEF5Q12774 1597 aa19.44■□□□□ 0.7
SLIRP-211ENST00000557623 CCDC141Q6ZP82 1450 aa19.43■□□□□ 0.7
SLIRP-211ENST00000557623 ADGBQ8N7X0 1667 aa19.41■□□□□ 0.7
SLIRP-211ENST00000557623 MADDQ8WXG6 1647 aa19.4■□□□□ 0.7
SLIRP-211ENST00000557623 RTEL1-TNFRSF6BF6WH68 1400 aa19.4■□□□□ 0.7
SLIRP-211ENST00000557623 PTPN23Q9H3S7 1636 aa19.4■□□□□ 0.7
SLIRP-211ENST00000557623 FER1L4A9Z1Z3 1794 aa19.39■□□□□ 0.7
SLIRP-211ENST00000557623 AGLP35573 1532 aa19.39■□□□□ 0.69
SLIRP-211ENST00000557623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.694e-8■■■■□ 19.3
SLIRP-211ENST00000557623 RIMS1Q86UR5 1692 aaKnown RBP19.37■□□□□ 0.69
SLIRP-211ENST00000557623 FGD6Q6ZV73 1430 aa19.36■□□□□ 0.69
SLIRP-211ENST00000557623 TSPY4P0CV99 314 aa19.36■□□□□ 0.69
SLIRP-211ENST00000557623 TSPY10P0CW01 314 aa19.36■□□□□ 0.69
SLIRP-211ENST00000557623 MLECQ14165 292 aa19.35■□□□□ 0.69
SLIRP-211ENST00000557623 MAST1Q9Y2H9 1570 aa19.34■□□□□ 0.69
SLIRP-211ENST00000557623 A2MP01023 1474 aa19.34■□□□□ 0.69
SLIRP-211ENST00000557623 PTPRMP28827 1452 aa19.34■□□□□ 0.69
SLIRP-211ENST00000557623 PLXNC1O60486 1568 aa19.33■□□□□ 0.69
SLIRP-211ENST00000557623 TCOF1Q13428 1488 aaKnown RBP19.33■□□□□ 0.68
SLIRP-211ENST00000557623 CROCC2H7BZ55 1655 aa19.32■□□□□ 0.68
SLIRP-211ENST00000557623 DNMT1P26358 1616 aaKnown RBP19.29■□□□□ 0.68
SLIRP-211ENST00000557623 DHX29Q7Z478 1369 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms