RNA–Protein interactions for RNA: ENST00000557592.5

APEX1-220, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 5

Gene APEX1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-220ENST00000557592 NEO1Q92859 1461 aa17.67■□□□□ 0.42
APEX1-220ENST00000557592 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
APEX1-220ENST00000557592 ITSN2Q9NZM3 1697 aa17.66■□□□□ 0.42
APEX1-220ENST00000557592 EFCAB2Q5VUJ9 269 aa17.65■□□□□ 0.42
APEX1-220ENST00000557592 KDM6BO15054 1643 aa17.65■□□□□ 0.42
APEX1-220ENST00000557592 PPARGC1BQ86YN6 1023 aaKnown RBP17.64■□□□□ 0.41
APEX1-220ENST00000557592 PHLDB1Q86UU1 1377 aa17.64■□□□□ 0.41
APEX1-220ENST00000557592 AKNAQ7Z591 1439 aa17.64■□□□□ 0.41
APEX1-220ENST00000557592 CFDP1Q9UEE9 299 aaPredicted RBP17.63■□□□□ 0.41
APEX1-220ENST00000557592 ZNF777Q9ULD5 760 aaPredicted RBP17.61■□□□□ 0.41
APEX1-220ENST00000557592 ADGRL1O94910 1474 aa17.6■□□□□ 0.41
APEX1-220ENST00000557592 COL17A1Q9UMD9 1497 aaPredicted RBP17.59■□□□□ 0.41
APEX1-220ENST00000557592 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
APEX1-220ENST00000557592 SAMD9LQ8IVG5 1584 aa17.57■□□□□ 0.4
APEX1-220ENST00000557592 SCAPERQ9BY12 1400 aa17.57■□□□□ 0.4
APEX1-220ENST00000557592 ABCC1P33527 1531 aa17.56■□□□□ 0.4
APEX1-220ENST00000557592 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
APEX1-220ENST00000557592 ZNF644Q9H582 1327 aaPredicted RBP17.54■□□□□ 0.4
APEX1-220ENST00000557592 RAPGEF3O95398 923 aa17.54■□□□□ 0.4
APEX1-220ENST00000557592 SYCP2Q9BX26 1530 aa17.53■□□□□ 0.4
APEX1-220ENST00000557592 RICTORQ6R327 1708 aa17.53■□□□□ 0.4
APEX1-220ENST00000557592 CAMSAP2Q08AD1 1489 aa17.53■□□□□ 0.4
APEX1-220ENST00000557592 PLEKHH2Q8IVE3 1493 aa17.53■□□□□ 0.4
APEX1-220ENST00000557592 MIA2Q96PC5 1412 aa17.53■□□□□ 0.4
APEX1-220ENST00000557592 FRMPD1Q5SYB0 1578 aa17.53■□□□□ 0.4
APEX1-220ENST00000557592 POGZQ7Z3K3 1410 aa17.52■□□□□ 0.4
APEX1-220ENST00000557592 ARHGEF12Q9NZN5 1544 aa17.52■□□□□ 0.39
APEX1-220ENST00000557592 FGD6Q6ZV73 1430 aa17.51■□□□□ 0.39
APEX1-220ENST00000557592 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.39
APEX1-220ENST00000557592 PTPN23Q9H3S7 1636 aa17.5■□□□□ 0.39
APEX1-220ENST00000557592 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
APEX1-220ENST00000557592 KIAA1107Q9UPP5 1409 aa17.49■□□□□ 0.39
APEX1-220ENST00000557592 TRAPPC8Q9Y2L5 1435 aa17.48■□□□□ 0.39
APEX1-220ENST00000557592 AFAP1Q8N556 730 aa17.47■□□□□ 0.39
APEX1-220ENST00000557592 ZMYM4Q5VZL5 1548 aa17.45■□□□□ 0.38
APEX1-220ENST00000557592 KDM5CP41229 1560 aa17.45■□□□□ 0.38
APEX1-220ENST00000557592 TCOF1Q13428 1488 aaKnown RBP17.44■□□□□ 0.38
APEX1-220ENST00000557592 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
APEX1-220ENST00000557592 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
APEX1-220ENST00000557592 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
APEX1-220ENST00000557592 CCDC141Q6ZP82 1450 aa17.43■□□□□ 0.38
APEX1-220ENST00000557592 ARHGEF5Q12774 1597 aa17.42■□□□□ 0.38
APEX1-220ENST00000557592 HECW2Q9P2P5 1572 aa17.42■□□□□ 0.38
APEX1-220ENST00000557592 ZFYVE16Q7Z3T8 1539 aa17.41■□□□□ 0.38
APEX1-220ENST00000557592 MAGI2Q86UL8 1455 aa17.4■□□□□ 0.38
APEX1-220ENST00000557592 RSPH4AQ5TD94 716 aa17.4■□□□□ 0.38
APEX1-220ENST00000557592 SPAG9O60271 1321 aaKnown RBP17.4■□□□□ 0.38
APEX1-220ENST00000557592 MLH3Q9UHC1 1453 aa17.39■□□□□ 0.37
APEX1-220ENST00000557592 ARHGEF40Q8TER5 1519 aa17.39■□□□□ 0.37
APEX1-220ENST00000557592 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
APEX1-220ENST00000557592 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
APEX1-220ENST00000557592 ATP7AQ04656 1500 aa17.37■□□□□ 0.37
APEX1-220ENST00000557592 INO80Q9ULG1 1556 aaPredicted RBP17.37■□□□□ 0.37
APEX1-220ENST00000557592 DNMT1P26358 1616 aaKnown RBP17.37■□□□□ 0.37
APEX1-220ENST00000557592 CROCC2H7BZ55 1655 aa17.36■□□□□ 0.37
APEX1-220ENST00000557592 TSPY4P0CV99 314 aa17.36■□□□□ 0.37
APEX1-220ENST00000557592 TSPY10P0CW01 314 aa17.36■□□□□ 0.37
APEX1-220ENST00000557592 DAPK1P53355 1430 aa17.36■□□□□ 0.37
APEX1-220ENST00000557592 RRBP1Q9P2E9 1410 aaKnown RBP17.36■□□□□ 0.37
APEX1-220ENST00000557592 ABCA6Q8N139 1617 aa17.36■□□□□ 0.37
APEX1-220ENST00000557592 ABCC5O15440 1437 aa17.35■□□□□ 0.37
APEX1-220ENST00000557592 DIP2CQ9Y2E4 1556 aa17.35■□□□□ 0.37
APEX1-220ENST00000557592 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
APEX1-220ENST00000557592 RTEL1-TNFRSF6BF6WH68 1400 aa17.33■□□□□ 0.36
APEX1-220ENST00000557592 MAST1Q9Y2H9 1570 aa17.32■□□□□ 0.36
APEX1-220ENST00000557592 ATP10AO60312 1499 aa17.32■□□□□ 0.36
APEX1-220ENST00000557592 SHANK2Q9UPX8 1470 aa17.32■□□□□ 0.36
APEX1-220ENST00000557592 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.32■□□□□ 0.36
APEX1-220ENST00000557592 ITGAEP38570 1179 aa17.3■□□□□ 0.36
APEX1-220ENST00000557592 CHIC2Q9UKJ5 165 aa17.29■□□□□ 0.36
APEX1-220ENST00000557592 ADGBQ8N7X0 1667 aa17.29■□□□□ 0.36
APEX1-220ENST00000557592 ARID4BQ4LE39 1312 aaPredicted RBP17.27■□□□□ 0.36
APEX1-220ENST00000557592 PLXNC1O60486 1568 aa17.27■□□□□ 0.35
APEX1-220ENST00000557592 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.35
APEX1-220ENST00000557592 A2MP01023 1474 aa17.26■□□□□ 0.35
APEX1-220ENST00000557592 PTPRKQ15262 1439 aa17.26■□□□□ 0.35
APEX1-220ENST00000557592 REREQ9P2R6 1566 aa17.26■□□□□ 0.35
APEX1-220ENST00000557592 ANKRD30AQ9BXX3 1397 aa17.25■□□□□ 0.35
APEX1-220ENST00000557592 RRP7BPQ9NSQ0 103 aa17.23■□□□□ 0.35
APEX1-220ENST00000557592 KIF15Q9NS87 1388 aa17.23■□□□□ 0.35
APEX1-220ENST00000557592 ADGRL2O95490 1459 aa17.23■□□□□ 0.35
APEX1-220ENST00000557592 DHX29Q7Z478 1369 aaKnown RBP17.22■□□□□ 0.35
APEX1-220ENST00000557592 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
APEX1-220ENST00000557592 AGLP35573 1532 aa17.21■□□□□ 0.34
APEX1-220ENST00000557592 DUOX2Q9NRD8 1548 aa17.2■□□□□ 0.34
APEX1-220ENST00000557592 BCORL1Q5H9F3 1711 aa17.19■□□□□ 0.34
APEX1-220ENST00000557592 MLECQ14165 292 aa17.19■□□□□ 0.34
APEX1-220ENST00000557592 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
APEX1-220ENST00000557592 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
APEX1-220ENST00000557592 KIF3BO15066 747 aa17.15■□□□□ 0.34
APEX1-220ENST00000557592 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
APEX1-220ENST00000557592 ADAMTSL3P82987 1691 aa17.13■□□□□ 0.33
APEX1-220ENST00000557592 GGT6Q6P531 493 aa17.13■□□□□ 0.33
APEX1-220ENST00000557592 KDM4FA0A1W2PPD8 638 aa17.12■□□□□ 0.33
APEX1-220ENST00000557592 FER1L4A9Z1Z3 1794 aa17.12■□□□□ 0.33
APEX1-220ENST00000557592 ANKRD50Q9ULJ7 1429 aa17.12■□□□□ 0.33
APEX1-220ENST00000557592 MADDQ8WXG6 1647 aa17.11■□□□□ 0.33
APEX1-220ENST00000557592 RNF17Q9BXT8 1623 aaKnown RBP17.1■□□□□ 0.33
APEX1-220ENST00000557592 GCC2Q8IWJ2 1684 aa17.1■□□□□ 0.33
APEX1-220ENST00000557592 RIMS1Q86UR5 1692 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms