RNA–Protein interactions for RNA: ENST00000557577.1

NUMB-227, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 3

Gene NUMB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-227ENST00000557577 MYO5CQ9NQX4 1742 aa19.73■□□□□ 0.75
NUMB-227ENST00000557577 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
NUMB-227ENST00000557577 ARHGAP5Q13017 1502 aa19.72■□□□□ 0.75
NUMB-227ENST00000557577 ZFYVE16Q7Z3T8 1539 aa19.71■□□□□ 0.75
NUMB-227ENST00000557577 CEP162Q5TB80 1403 aa19.68■□□□□ 0.74
NUMB-227ENST00000557577 YEATS2Q9ULM3 1422 aa19.68■□□□□ 0.74
NUMB-227ENST00000557577 ZNF518AQ6AHZ1 1483 aa19.67■□□□□ 0.74
NUMB-227ENST00000557577 ADAMTSL3P82987 1691 aa19.65■□□□□ 0.74
NUMB-227ENST00000557577 PTPRMP28827 1452 aa19.64■□□□□ 0.73
NUMB-227ENST00000557577 BCORL1Q5H9F3 1711 aa19.63■□□□□ 0.73
NUMB-227ENST00000557577 PREX2Q70Z35 1606 aa19.63■□□□□ 0.73
NUMB-227ENST00000557577 AFAP1Q8N556 730 aa19.62■□□□□ 0.73
NUMB-227ENST00000557577 ATP10AO60312 1499 aa19.61■□□□□ 0.73
NUMB-227ENST00000557577 KDM5CP41229 1560 aa19.61■□□□□ 0.73
NUMB-227ENST00000557577 MTUS2Q5JR59 1369 aa19.6■□□□□ 0.73
NUMB-227ENST00000557577 C9orf84Q5VXU9 1444 aa19.59■□□□□ 0.73
NUMB-227ENST00000557577 HECW2Q9P2P5 1572 aa19.59■□□□□ 0.73
NUMB-227ENST00000557577 CDC42BPBQ9Y5S2 1711 aa19.59■□□□□ 0.73
NUMB-227ENST00000557577 ABCC1P33527 1531 aa19.58■□□□□ 0.73
NUMB-227ENST00000557577 GPATCH8Q9UKJ3 1502 aaKnown RBP19.57■□□□□ 0.72
NUMB-227ENST00000557577 MYT1LQ9UL68 1186 aa19.57■□□□□ 0.72
NUMB-227ENST00000557577 MADDQ8WXG6 1647 aa19.57■□□□□ 0.72
NUMB-227ENST00000557577 MLH3Q9UHC1 1453 aa19.56■□□□□ 0.72
NUMB-227ENST00000557577 CCNB3Q8WWL7 1395 aa19.56■□□□□ 0.72
NUMB-227ENST00000557577 TRAPPC8Q9Y2L5 1435 aa19.55■□□□□ 0.72
NUMB-227ENST00000557577 ARHGEF12Q9NZN5 1544 aa19.55■□□□□ 0.72
NUMB-227ENST00000557577 LOC105371045A0A1W2PR82 267 aa19.54■□□□□ 0.72
NUMB-227ENST00000557577 CFDP1Q9UEE9 299 aaPredicted RBP19.54■□□□□ 0.72
NUMB-227ENST00000557577 ZNF777Q9ULD5 760 aaPredicted RBP19.54■□□□□ 0.72
NUMB-227ENST00000557577 MLECQ14165 292 aa19.53■□□□□ 0.72
NUMB-227ENST00000557577 CDC42BPAQ5VT25 1732 aa19.53■□□□□ 0.72
NUMB-227ENST00000557577 EHBP1L1Q8N3D4 1523 aa19.52■□□□□ 0.72
NUMB-227ENST00000557577 PLEKHH2Q8IVE3 1493 aa19.52■□□□□ 0.72
NUMB-227ENST00000557577 SIGLEC1Q9BZZ2 1709 aa19.51■□□□□ 0.71
NUMB-227ENST00000557577 KIAA1107Q9UPP5 1409 aa19.51■□□□□ 0.71
NUMB-227ENST00000557577 REREQ9P2R6 1566 aa19.5■□□□□ 0.71
NUMB-227ENST00000557577 ITSN2Q9NZM3 1697 aa19.49■□□□□ 0.71
NUMB-227ENST00000557577 DIP2CQ9Y2E4 1556 aa19.49■□□□□ 0.71
NUMB-227ENST00000557577 VPS8Q8N3P4 1428 aa19.49■□□□□ 0.71
NUMB-227ENST00000557577 SAMD9LQ8IVG5 1584 aa19.49■□□□□ 0.71
NUMB-227ENST00000557577 RIMS1Q86UR5 1692 aaKnown RBP19.48■□□□□ 0.71
NUMB-227ENST00000557577 SYCP2Q9BX26 1530 aa19.47■□□□□ 0.71
NUMB-227ENST00000557577 HNRNPMP52272 730 aaKnown RBP eCLIP19.46■□□□□ 0.71
NUMB-227ENST00000557577 SPAG9O60271 1321 aaKnown RBP19.46■□□□□ 0.71
NUMB-227ENST00000557577 AGLP35573 1532 aa19.45■□□□□ 0.7
NUMB-227ENST00000557577 ABCA6Q8N139 1617 aa19.44■□□□□ 0.7
NUMB-227ENST00000557577 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
NUMB-227ENST00000557577 LMTK3Q96Q04 1460 aa19.41■□□□□ 0.7
NUMB-227ENST00000557577 PLPPR3Q6T4P5 718 aa19.41■□□□□ 0.7
NUMB-227ENST00000557577 FER1L4A9Z1Z3 1794 aa19.41■□□□□ 0.7
NUMB-227ENST00000557577 KIDINS220Q9ULH0 1771 aa19.4■□□□□ 0.7
NUMB-227ENST00000557577 NCOA2Q15596 1464 aa19.4■□□□□ 0.7
NUMB-227ENST00000557577 ESF1Q9H501 851 aaKnown RBP19.38■□□□□ 0.69
NUMB-227ENST00000557577 ZNF644Q9H582 1327 aaPredicted RBP19.38■□□□□ 0.69
NUMB-227ENST00000557577 SUPT6HQ7KZ85 1726 aaKnown RBP19.37■□□□□ 0.69
NUMB-227ENST00000557577 ATP7AQ04656 1500 aa19.37■□□□□ 0.69
NUMB-227ENST00000557577 MAP3K1Q13233 1512 aa19.37■□□□□ 0.69
NUMB-227ENST00000557577 LRRC9Q6ZRR7 1453 aa19.36■□□□□ 0.69
NUMB-227ENST00000557577 MBD5Q9P267 1494 aa19.36■□□□□ 0.69
NUMB-227ENST00000557577 RSPH4AQ5TD94 716 aa19.35■□□□□ 0.69
NUMB-227ENST00000557577 INO80Q9ULG1 1556 aaPredicted RBP19.35■□□□□ 0.69
NUMB-227ENST00000557577 RTEL1-TNFRSF6BF6WH68 1400 aa19.34■□□□□ 0.69
NUMB-227ENST00000557577 CNTLNQ9NXG0 1405 aa19.34■□□□□ 0.69
NUMB-227ENST00000557577 CEBPAP49715 358 aaPredicted RBP19.33■□□□□ 0.68
NUMB-227ENST00000557577 A2MP01023 1474 aa19.33■□□□□ 0.68
NUMB-227ENST00000557577 CAMSAP2Q08AD1 1489 aa19.3■□□□□ 0.68
NUMB-227ENST00000557577 PLXNC1O60486 1568 aa19.3■□□□□ 0.68
NUMB-227ENST00000557577 CCDC141Q6ZP82 1450 aa19.29■□□□□ 0.68
NUMB-227ENST00000557577 HSPA2P54652 639 aa19.29■□□□□ 0.68
NUMB-227ENST00000557577 APLP2Q06481 763 aa19.29■□□□□ 0.68
NUMB-227ENST00000557577 KANK4Q5T7N3 995 aaPredicted RBP19.28■□□□□ 0.68
NUMB-227ENST00000557577 UHRF1BP1Q6BDS2 1440 aa19.26■□□□□ 0.67
NUMB-227ENST00000557577 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
NUMB-227ENST00000557577 MIA2Q96PC5 1412 aa19.25■□□□□ 0.67
NUMB-227ENST00000557577 PREX1Q8TCU6 1659 aa19.24■□□□□ 0.67
NUMB-227ENST00000557577 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
NUMB-227ENST00000557577 TSPY4P0CV99 314 aa19.24■□□□□ 0.67
NUMB-227ENST00000557577 TSPY10P0CW01 314 aa19.24■□□□□ 0.67
NUMB-227ENST00000557577 ADGBQ8N7X0 1667 aa19.24■□□□□ 0.67
NUMB-227ENST00000557577 GGT6Q6P531 493 aa19.23■□□□□ 0.67
NUMB-227ENST00000557577 MYOM3Q5VTT5 1437 aa19.23■□□□□ 0.67
NUMB-227ENST00000557577 ARHGEF5Q12774 1597 aa19.23■□□□□ 0.67
NUMB-227ENST00000557577 ZMYM3Q14202 1370 aa19.22■□□□□ 0.67
NUMB-227ENST00000557577 C3P01024 1663 aa19.21■□□□□ 0.67
NUMB-227ENST00000557577 NPATQ14207 1427 aa19.21■□□□□ 0.67
NUMB-227ENST00000557577 ILDR1Q86SU0 546 aaPredicted RBP19.21■□□□□ 0.67
NUMB-227ENST00000557577 MROH2AA6NES4 1674 aa19.2■□□□□ 0.66
NUMB-227ENST00000557577 KIF3BO15066 747 aa19.16■□□□□ 0.66
NUMB-227ENST00000557577 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
NUMB-227ENST00000557577 SETD1BQ9UPS6 1966 aaKnown RBP19.15■□□□□ 0.66
NUMB-227ENST00000557577 FAM135AQ9P2D6 1515 aa19.13■□□□□ 0.65
NUMB-227ENST00000557577 MAST1Q9Y2H9 1570 aa19.13■□□□□ 0.65
NUMB-227ENST00000557577 CLTCQ00610 1675 aaKnown RBP19.12■□□□□ 0.65
NUMB-227ENST00000557577 PTPRKQ15262 1439 aa19.12■□□□□ 0.65
NUMB-227ENST00000557577 WASHC2CQ9Y4E1 1318 aa19.09■□□□□ 0.65
NUMB-227ENST00000557577 FBXO41Q8TF61 875 aa19.09■□□□□ 0.65
NUMB-227ENST00000557577 KDM5DQ9BY66 1539 aa19.09■□□□□ 0.65
NUMB-227ENST00000557577 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.64
NUMB-227ENST00000557577 SHANK2Q9UPX8 1470 aa19.07■□□□□ 0.64
NUMB-227ENST00000557577 PTPRTO14522 1441 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms