RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 MMRN1Q13201 1228 aa6.63□□□□□ -1.35
HMGB1P14-201ENST00000557424 IRX5P78411 483 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P14-201ENST00000557424 C3orf67Q6ZVT6 689 aa6.62□□□□□ -1.35
HMGB1P14-201ENST00000557424 BOLA1Q9Y3E2 137 aa6.62□□□□□ -1.35
HMGB1P14-201ENST00000557424 TMC2Q8TDI7 906 aa6.61□□□□□ -1.35
HMGB1P14-201ENST00000557424 BCANQ96GW7 911 aa6.61□□□□□ -1.35
HMGB1P14-201ENST00000557424 TSHZ2Q9NRE2 1034 aa6.61□□□□□ -1.35
HMGB1P14-201ENST00000557424 TULP1O00294 542 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P14-201ENST00000557424 NBR1Q14596 966 aa6.6□□□□□ -1.35
HMGB1P14-201ENST00000557424 ZNF316A6NFI3 1004 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P14-201ENST00000557424 MICALL2Q8IY33 904 aa6.57□□□□□ -1.36
HMGB1P14-201ENST00000557424 PDCD7Q8N8D1 485 aaKnown RBP6.57□□□□□ -1.36
HMGB1P14-201ENST00000557424 MS4A4AQ96JQ5 239 aa6.57□□□□□ -1.36
HMGB1P14-201ENST00000557424 SPNS2Q8IVW8 549 aa6.56□□□□□ -1.36
HMGB1P14-201ENST00000557424 DDX27Q96GQ7 796 aaKnown RBP6.56□□□□□ -1.36
HMGB1P14-201ENST00000557424 TMEM121BQ9BXQ6 578 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P14-201ENST00000557424 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.54□□□□□ -1.36
HMGB1P14-201ENST00000557424 POTEFA5A3E0 1075 aa6.53□□□□□ -1.36
HMGB1P14-201ENST00000557424 E2F4Q16254 413 aa6.53□□□□□ -1.36
HMGB1P14-201ENST00000557424 GPHNQ9NQX3 736 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P14-201ENST00000557424 PPP1R37O75864 691 aa6.52□□□□□ -1.37
HMGB1P14-201ENST00000557424 MFSD10Q14728 455 aa6.52□□□□□ -1.37
HMGB1P14-201ENST00000557424 LARP6Q9BRS8 491 aaKnown RBP6.52□□□□□ -1.37
HMGB1P14-201ENST00000557424 CRISPLD2Q9H0B8 497 aa6.52□□□□□ -1.37
HMGB1P14-201ENST00000557424 TPRNQ4KMQ1 711 aa6.5□□□□□ -1.37
HMGB1P14-201ENST00000557424 PPP1R15BQ5SWA1 713 aa6.5□□□□□ -1.37
HMGB1P14-201ENST00000557424 ARHGEF1Q92888 912 aaKnown RBP6.5□□□□□ -1.37
HMGB1P14-201ENST00000557424 RIMBP2O15034 1052 aa6.49□□□□□ -1.37
HMGB1P14-201ENST00000557424 SMYD5Q6GMV2 418 aa6.49□□□□□ -1.37
HMGB1P14-201ENST00000557424 KDM2AQ9Y2K7 1162 aa6.49□□□□□ -1.37
HMGB1P14-201ENST00000557424 ST18O60284 1047 aa6.48□□□□□ -1.37
HMGB1P14-201ENST00000557424 TBC1D12O60347 775 aa6.48□□□□□ -1.37
HMGB1P14-201ENST00000557424 FOXK1P85037 733 aa6.48□□□□□ -1.37
HMGB1P14-201ENST00000557424 DPY19L2Q6NUT2 758 aa6.47□□□□□ -1.37
HMGB1P14-201ENST00000557424 COLQQ9Y215 455 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P14-201ENST00000557424 SNPHO15079 494 aa6.46□□□□□ -1.38
HMGB1P14-201ENST00000557424 ARIH1Q9Y4X5 557 aaPredicted RBP6.46□□□□□ -1.38
HMGB1P14-201ENST00000557424 NCKAP5LQ9HCH0 1330 aa6.46□□□□□ -1.38
HMGB1P14-201ENST00000557424 SPDYE16A6NNV3 312 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P14-201ENST00000557424 CADPS2Q86UW7 1296 aa6.45□□□□□ -1.38
HMGB1P14-201ENST00000557424 CAMK2BQ13554 666 aa6.44□□□□□ -1.38
HMGB1P14-201ENST00000557424 DOK7Q18PE1 504 aa6.44□□□□□ -1.38
HMGB1P14-201ENST00000557424 C2orf72A6NCS6 295 aa6.43□□□□□ -1.38
HMGB1P14-201ENST00000557424 KIF3CO14782 793 aa6.42□□□□□ -1.38
HMGB1P14-201ENST00000557424 PLPP6Q8IY26 295 aa6.42□□□□□ -1.38
HMGB1P14-201ENST00000557424 KCNV2Q8TDN2 545 aa6.42□□□□□ -1.38
HMGB1P14-201ENST00000557424 DSG2Q14126 1118 aa6.41□□□□□ -1.38
HMGB1P14-201ENST00000557424 ZSWIM6Q9HCJ5 1215 aa6.41□□□□□ -1.38
HMGB1P14-201ENST00000557424 SLC34A2O95436 690 aa6.4□□□□□ -1.38
HMGB1P14-201ENST00000557424 MAP3K9P80192 1104 aa6.4□□□□□ -1.38
HMGB1P14-201ENST00000557424 ZNF710Q8N1W2 664 aa6.39□□□□□ -1.39
HMGB1P14-201ENST00000557424 SLAIN1Q8ND83 568 aa6.39□□□□□ -1.39
HMGB1P14-201ENST00000557424 TIMELESSQ9UNS1 1208 aa6.38□□□□□ -1.39
HMGB1P14-201ENST00000557424 PSDA5PKW4 1024 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P14-201ENST00000557424 PDIA6Q15084 440 aa6.37□□□□□ -1.39
HMGB1P14-201ENST00000557424 PTCD2Q8WV60 388 aaKnown RBP6.35□□□□□ -1.39
HMGB1P14-201ENST00000557424 OXER1Q8TDS5 423 aa6.34□□□□□ -1.39
HMGB1P14-201ENST00000557424 DPYSL4O14531 572 aa6.33□□□□□ -1.4
HMGB1P14-201ENST00000557424 KCNH8Q96L42 1107 aa6.33□□□□□ -1.4
HMGB1P14-201ENST00000557424 UPF1Q92900 1129 aaKnown RBP eCLIP6.32□□□□□ -1.4
HMGB1P14-201ENST00000557424 TESPA1A2RU30 521 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P14-201ENST00000557424 TMEM92Q6UXU6 159 aa6.31□□□□□ -1.4
HMGB1P14-201ENST00000557424 MARVELD3Q96A59 401 aa6.31□□□□□ -1.4
HMGB1P14-201ENST00000557424 EVI5O60447 810 aa6.3□□□□□ -1.4
HMGB1P14-201ENST00000557424 FBXW7Q969H0 707 aa6.3□□□□□ -1.4
HMGB1P14-201ENST00000557424 EPAS1Q99814 870 aa6.3□□□□□ -1.4
HMGB1P14-201ENST00000557424 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
HMGB1P14-201ENST00000557424 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
HMGB1P14-201ENST00000557424 EMILIN3Q9NT22 766 aa6.3□□□□□ -1.4
HMGB1P14-201ENST00000557424 PTGER2P43116 358 aa6.29□□□□□ -1.4
HMGB1P14-201ENST00000557424 PCDHGA4Q9Y5G9 962 aa6.29□□□□□ -1.4
HMGB1P14-201ENST00000557424 PHF14O94880 888 aa6.27□□□□□ -1.41
HMGB1P14-201ENST00000557424 LMOD2Q6P5Q4 547 aa6.27□□□□□ -1.41
HMGB1P14-201ENST00000557424 JPH4Q96JJ6 628 aa6.27□□□□□ -1.41
HMGB1P14-201ENST00000557424 SEMA3EO15041 775 aa6.26□□□□□ -1.41
HMGB1P14-201ENST00000557424 PPP4R3BQ5MIZ7 849 aa6.26□□□□□ -1.41
HMGB1P14-201ENST00000557424 CERKQ8TCT0 537 aa6.26□□□□□ -1.41
HMGB1P14-201ENST00000557424 TYW1BQ6NUM6 668 aa6.25□□□□□ -1.41
HMGB1P14-201ENST00000557424 GPIHBP1Q8IV16 184 aa6.25□□□□□ -1.41
HMGB1P14-201ENST00000557424 ANO8Q9HCE9 1232 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P14-201ENST00000557424 GRXCR2A6NFK2 248 aa6.23□□□□□ -1.41
HMGB1P14-201ENST00000557424 HOXB1P14653 301 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P14-201ENST00000557424 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB1P14-201ENST00000557424 DAXXQ9UER7 740 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P14-201ENST00000557424 POTEB3A0JP26 581 aa6.22□□□□□ -1.41
HMGB1P14-201ENST00000557424 POTEBQ6S5H4 581 aa6.22□□□□□ -1.41
HMGB1P14-201ENST00000557424 MAP3K7O43318 606 aa6.21□□□□□ -1.42
HMGB1P14-201ENST00000557424 FCHSD2O94868 740 aa6.21□□□□□ -1.42
HMGB1P14-201ENST00000557424 HOXB3P14651 431 aaPredicted RBP6.21□□□□□ -1.42
HMGB1P14-201ENST00000557424 ZDHHC16Q969W1 377 aa6.21□□□□□ -1.42
HMGB1P14-201ENST00000557424 EMP3P54852 163 aa6.2□□□□□ -1.42
HMGB1P14-201ENST00000557424 EN1Q05925 392 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P14-201ENST00000557424 ARSIQ5FYB1 569 aa6.2□□□□□ -1.42
HMGB1P14-201ENST00000557424 ZNF454Q8N9F8 522 aa6.2□□□□□ -1.42
HMGB1P14-201ENST00000557424 DDX12PQ92771 950 aa6.2□□□□□ -1.42
HMGB1P14-201ENST00000557424 GTF3C3Q9Y5Q9 886 aa6.2□□□□□ -1.42
HMGB1P14-201ENST00000557424 NUTM2FA1L443 756 aa6.19□□□□□ -1.42
HMGB1P14-201ENST00000557424 NUDT7P0C024 238 aa6.19□□□□□ -1.42
HMGB1P14-201ENST00000557424 PBX2P40425 430 aa6.19□□□□□ -1.42
HMGB1P14-201ENST00000557424 HIC1Q14526 733 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms