RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 RAPGEF3O95398 923 aa26.43■■□□□ 1.82
TVP23C-CDRT4-204ENST00000557349 CDC42BPBQ9Y5S2 1711 aa26.42■■□□□ 1.82
TVP23C-CDRT4-204ENST00000557349 CDC42BPAQ5VT25 1732 aa26.42■■□□□ 1.82
TVP23C-CDRT4-204ENST00000557349 RICTORQ6R327 1708 aa26.39■■□□□ 1.82
TVP23C-CDRT4-204ENST00000557349 SCAPERQ9BY12 1400 aa26.39■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 CCNB3Q8WWL7 1395 aa26.38■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 SUPT6HQ7KZ85 1726 aaKnown RBP26.36■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 MAP3K1Q13233 1512 aa26.36■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 GPATCH8Q9UKJ3 1502 aaKnown RBP26.36■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 POGZQ7Z3K3 1410 aa26.35■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 LRRC9Q6ZRR7 1453 aa26.35■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 APLP2Q06481 763 aa26.34■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 ITSN2Q9NZM3 1697 aa26.33■■□□□ 1.81
TVP23C-CDRT4-204ENST00000557349 ZMYM4Q5VZL5 1548 aa26.32■■□□□ 1.8
TVP23C-CDRT4-204ENST00000557349 NCOA2Q15596 1464 aa26.31■■□□□ 1.8
TVP23C-CDRT4-204ENST00000557349 ABCC1P33527 1531 aa26.31■■□□□ 1.8
TVP23C-CDRT4-204ENST00000557349 CFDP1Q9UEE9 299 aaPredicted RBP26.29■■□□□ 1.8
TVP23C-CDRT4-204ENST00000557349 ZNF777Q9ULD5 760 aaPredicted RBP26.29■■□□□ 1.8
TVP23C-CDRT4-204ENST00000557349 ZNF518AQ6AHZ1 1483 aa26.29■■□□□ 1.8
TVP23C-CDRT4-204ENST00000557349 ARHGEF40Q8TER5 1519 aa26.29■■□□□ 1.8
TVP23C-CDRT4-204ENST00000557349 SAMD9LQ8IVG5 1584 aa26.28■■□□□ 1.8
TVP23C-CDRT4-204ENST00000557349 ZFYVE16Q7Z3T8 1539 aa26.26■■□□□ 1.79
TVP23C-CDRT4-204ENST00000557349 KANK4Q5T7N3 995 aaPredicted RBP26.24■■□□□ 1.79
TVP23C-CDRT4-204ENST00000557349 MAGI2Q86UL8 1455 aa26.23■■□□□ 1.79
TVP23C-CDRT4-204ENST00000557349 SYCP2Q9BX26 1530 aa26.23■■□□□ 1.79
TVP23C-CDRT4-204ENST00000557349 KDM5CP41229 1560 aa26.22■■□□□ 1.79
TVP23C-CDRT4-204ENST00000557349 ARHGEF12Q9NZN5 1544 aa26.22■■□□□ 1.79
TVP23C-CDRT4-204ENST00000557349 PLEKHH2Q8IVE3 1493 aa26.22■■□□□ 1.79
TVP23C-CDRT4-204ENST00000557349 YEATS2Q9ULM3 1422 aa26.2■■□□□ 1.78
TVP23C-CDRT4-204ENST00000557349 HECW2Q9P2P5 1572 aa26.2■■□□□ 1.78
TVP23C-CDRT4-204ENST00000557349 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
TVP23C-CDRT4-204ENST00000557349 AFAP1Q8N556 730 aa26.19■■□□□ 1.78
TVP23C-CDRT4-204ENST00000557349 TRAPPC8Q9Y2L5 1435 aa26.19■■□□□ 1.78
TVP23C-CDRT4-204ENST00000557349 MYT1LQ9UL68 1186 aa26.17■■□□□ 1.78
TVP23C-CDRT4-204ENST00000557349 KIAA1107Q9UPP5 1409 aa26.15■■□□□ 1.78
TVP23C-CDRT4-204ENST00000557349 KDM4FA0A1W2PPD8 638 aa26.14■■□□□ 1.78
TVP23C-CDRT4-204ENST00000557349 ARID4BQ4LE39 1312 aaPredicted RBP26.13■■□□□ 1.77
TVP23C-CDRT4-204ENST00000557349 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
TVP23C-CDRT4-204ENST00000557349 HNRNPMP52272 730 aaKnown RBP eCLIP26.12■■□□□ 1.776e-7■■■■□ 26.7
TVP23C-CDRT4-204ENST00000557349 ZNF644Q9H582 1327 aaPredicted RBP26.12■■□□□ 1.77
TVP23C-CDRT4-204ENST00000557349 MLH3Q9UHC1 1453 aa26.11■■□□□ 1.77
TVP23C-CDRT4-204ENST00000557349 MYOM3Q5VTT5 1437 aa26.1■■□□□ 1.77
TVP23C-CDRT4-204ENST00000557349 C9orf84Q5VXU9 1444 aa26.09■■□□□ 1.77
TVP23C-CDRT4-204ENST00000557349 DIP2CQ9Y2E4 1556 aa26.08■■□□□ 1.77
TVP23C-CDRT4-204ENST00000557349 ATP10AO60312 1499 aa26.08■■□□□ 1.77
TVP23C-CDRT4-204ENST00000557349 ABCA6Q8N139 1617 aa26.07■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 SPAG9O60271 1321 aaKnown RBP26.06■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 KIDINS220Q9ULH0 1771 aa26.05■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 MIA2Q96PC5 1412 aa26.04■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 MBD5Q9P267 1494 aa26.04■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 ATP7AQ04656 1500 aa26.04■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 BCORL1Q5H9F3 1711 aa26.03■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 SIGLEC1Q9BZZ2 1709 aa26.03■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 INO80Q9ULG1 1556 aaPredicted RBP26.03■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 CCDC141Q6ZP82 1450 aa26.02■■□□□ 1.76
TVP23C-CDRT4-204ENST00000557349 REREQ9P2R6 1566 aa25.99■■□□□ 1.75
TVP23C-CDRT4-204ENST00000557349 ADAMTSL3P82987 1691 aa25.99■■□□□ 1.75
TVP23C-CDRT4-204ENST00000557349 ARHGEF5Q12774 1597 aa25.98■■□□□ 1.75
TVP23C-CDRT4-204ENST00000557349 MADDQ8WXG6 1647 aa25.96■■□□□ 1.75
TVP23C-CDRT4-204ENST00000557349 FGD6Q6ZV73 1430 aa25.95■■□□□ 1.74
TVP23C-CDRT4-204ENST00000557349 PTPN23Q9H3S7 1636 aa25.95■■□□□ 1.74
TVP23C-CDRT4-204ENST00000557349 MLECQ14165 292 aa25.94■■□□□ 1.74
TVP23C-CDRT4-204ENST00000557349 RSPH4AQ5TD94 716 aa25.94■■□□□ 1.74
TVP23C-CDRT4-204ENST00000557349 RTEL1-TNFRSF6BF6WH68 1400 aa25.91■■□□□ 1.74
TVP23C-CDRT4-204ENST00000557349 AGLP35573 1532 aa25.89■■□□□ 1.74
TVP23C-CDRT4-204ENST00000557349 ADGBQ8N7X0 1667 aa25.89■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 RIMS1Q86UR5 1692 aaKnown RBP25.88■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 A2MP01023 1474 aa25.88■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 TSPY4P0CV99 314 aa25.88■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 TSPY10P0CW01 314 aa25.88■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 TCOF1Q13428 1488 aaKnown RBP25.87■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 PTPRMP28827 1452 aa25.86■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 PLXNC1O60486 1568 aa25.86■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 PPARGC1BQ86YN6 1023 aaKnown RBP25.85■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 MAST1Q9Y2H9 1570 aa25.84■■□□□ 1.73
TVP23C-CDRT4-204ENST00000557349 CROCC2H7BZ55 1655 aa25.82■■□□□ 1.72
TVP23C-CDRT4-204ENST00000557349 DNMT1P26358 1616 aaKnown RBP25.81■■□□□ 1.72
TVP23C-CDRT4-204ENST00000557349 SHANK2Q9UPX8 1470 aa25.79■■□□□ 1.72
TVP23C-CDRT4-204ENST00000557349 DAPK1P53355 1430 aa25.79■■□□□ 1.72
TVP23C-CDRT4-204ENST00000557349 FAM50AQ14320 339 aaKnown RBP25.78■■□□□ 1.72
TVP23C-CDRT4-204ENST00000557349 ABCC5O15440 1437 aa25.78■■□□□ 1.72
TVP23C-CDRT4-204ENST00000557349 DHX29Q7Z478 1369 aaKnown RBP25.76■■□□□ 1.71
TVP23C-CDRT4-204ENST00000557349 PLPPR3Q6T4P5 718 aa25.75■■□□□ 1.71
TVP23C-CDRT4-204ENST00000557349 ESF1Q9H501 851 aaKnown RBP25.75■■□□□ 1.71
TVP23C-CDRT4-204ENST00000557349 GGT6Q6P531 493 aa25.69■■□□□ 1.7
TVP23C-CDRT4-204ENST00000557349 CNTLNQ9NXG0 1405 aa25.68■■□□□ 1.7
TVP23C-CDRT4-204ENST00000557349 KIF15Q9NS87 1388 aa25.68■■□□□ 1.7
TVP23C-CDRT4-204ENST00000557349 KIF3BO15066 747 aa25.67■■□□□ 1.7
TVP23C-CDRT4-204ENST00000557349 DUOX2Q9NRD8 1548 aa25.67■■□□□ 1.7
TVP23C-CDRT4-204ENST00000557349 CHIC2Q9UKJ5 165 aa25.65■■□□□ 1.7
TVP23C-CDRT4-204ENST00000557349 EIF2AK4Q9P2K8 1649 aaKnown RBP25.64■■□□□ 1.7
TVP23C-CDRT4-204ENST00000557349 ANKRD30AQ9BXX3 1397 aa25.64■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 CLTCQ00610 1675 aaKnown RBP25.63■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 MROH2AA6NES4 1674 aa25.62■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 RRP7BPQ9NSQ0 103 aa25.62■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 C3P01024 1663 aa25.61■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 CEBPAP49715 358 aaPredicted RBP25.61■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 ADGRL2O95490 1459 aa25.6■■□□□ 1.69
TVP23C-CDRT4-204ENST00000557349 ERBINQ96RT1 1412 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms