RNA–Protein interactions for RNA: ENST00000557291.1

SV2B-205, Transcript of synaptic vesicle glycoprotein 2B, humanhuman

TSL 4

Gene SV2B, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2B-205ENST00000557291 TRIM41Q8WV44 630 aa9.7□□□□□ -0.86
SV2B-205ENST00000557291 ZSWIM6Q9HCJ5 1215 aa9.7□□□□□ -0.86
SV2B-205ENST00000557291 VARS2Q5ST30 1063 aaKnown RBP9.69□□□□□ -0.86
SV2B-205ENST00000557291 RNF166Q96A37 237 aaPredicted RBP9.69□□□□□ -0.86
SV2B-205ENST00000557291 TMEM92Q6UXU6 159 aa9.68□□□□□ -0.86
SV2B-205ENST00000557291 MICALL2Q8IY33 904 aa9.68□□□□□ -0.86
SV2B-205ENST00000557291 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
SV2B-205ENST00000557291 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
SV2B-205ENST00000557291 GPR153Q6NV75 609 aa9.65□□□□□ -0.86
SV2B-205ENST00000557291 MYT1LQ9UL68 1186 aa9.65□□□□□ -0.86
SV2B-205ENST00000557291 CC2D2AQ9P2K1 1620 aa9.64□□□□□ -0.87
SV2B-205ENST00000557291 SOX12O15370 315 aa9.64□□□□□ -0.87
SV2B-205ENST00000557291 MYT1Q01538 1121 aa9.64□□□□□ -0.87
SV2B-205ENST00000557291 CECR2Q9BXF3 1484 aa9.63□□□□□ -0.87
SV2B-205ENST00000557291 MS4A4AQ96JQ5 239 aa9.6□□□□□ -0.87
SV2B-205ENST00000557291 DCAF1Q9Y4B6 1507 aa9.6□□□□□ -0.87
SV2B-205ENST00000557291 PTGER2P43116 358 aa9.59□□□□□ -0.87
SV2B-205ENST00000557291 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
SV2B-205ENST00000557291 RIOK3O14730 519 aaKnown RBP9.57□□□□□ -0.88
SV2B-205ENST00000557291 ZCCHC6Q5VYS8 1495 aaKnown RBP9.57□□□□□ -0.88
SV2B-205ENST00000557291 PHF8Q9UPP1 1060 aa9.56□□□□□ -0.88
SV2B-205ENST00000557291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.55□□□□□ -0.88
SV2B-205ENST00000557291 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
SV2B-205ENST00000557291 ZFP91Q96JP5 570 aaPredicted RBP9.55□□□□□ -0.88
SV2B-205ENST00000557291 RNF25Q96BH1 459 aaPredicted RBP9.54□□□□□ -0.88
SV2B-205ENST00000557291 DNAJC5Q9H3Z4 198 aa9.54□□□□□ -0.88
SV2B-205ENST00000557291 VGFO15240 615 aaPredicted RBP9.53□□□□□ -0.88
SV2B-205ENST00000557291 TTBK1Q5TCY1 1321 aaPredicted RBP9.53□□□□□ -0.88
SV2B-205ENST00000557291 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
SV2B-205ENST00000557291 ANKRD13DQ6ZTN6 518 aa9.51□□□□□ -0.89
SV2B-205ENST00000557291 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
SV2B-205ENST00000557291 KHSRPQ92945 711 aaKnown RBP eCLIP9.49□□□□□ -0.89
SV2B-205ENST00000557291 NLRP6P59044 892 aa9.48□□□□□ -0.89
SV2B-205ENST00000557291 LSM11P83369 360 aaKnown RBP eCLIP9.47□□□□□ -0.89
SV2B-205ENST00000557291 FBXO22Q8NEZ5 403 aa9.46□□□□□ -0.9
SV2B-205ENST00000557291 KIF3CO14782 793 aa9.43□□□□□ -0.9
SV2B-205ENST00000557291 PBX2P40425 430 aa9.43□□□□□ -0.9
SV2B-205ENST00000557291 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
SV2B-205ENST00000557291 TAOK2Q9UL54 1235 aa9.4□□□□□ -0.9
SV2B-205ENST00000557291 C2orf72A6NCS6 295 aa9.39□□□□□ -0.91
SV2B-205ENST00000557291 SLC34A2O95436 690 aa9.39□□□□□ -0.91
SV2B-205ENST00000557291 NUDT7P0C024 238 aa9.39□□□□□ -0.91
SV2B-205ENST00000557291 POTEEQ6S8J3 1075 aa9.38□□□□□ -0.91
SV2B-205ENST00000557291 MFRPQ9BY79 579 aa9.38□□□□□ -0.91
SV2B-205ENST00000557291 LHX6Q9UPM6 363 aa9.37□□□□□ -0.91
SV2B-205ENST00000557291 PCDHGA4Q9Y5G9 962 aa9.36□□□□□ -0.91
SV2B-205ENST00000557291 STK24Q9Y6E0 443 aa9.36□□□□□ -0.91
SV2B-205ENST00000557291 AXIN2Q9Y2T1 843 aa9.35□□□□□ -0.91
SV2B-205ENST00000557291 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
SV2B-205ENST00000557291 PLA2G2EQ9NZK7 142 aa9.33□□□□□ -0.92
SV2B-205ENST00000557291 CUX2O14529 1486 aa9.29□□□□□ -0.92
SV2B-205ENST00000557291 STK25O00506 426 aa9.29□□□□□ -0.92
SV2B-205ENST00000557291 ARHGAP33O14559 1287 aa9.29□□□□□ -0.92
SV2B-205ENST00000557291 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
SV2B-205ENST00000557291 TMC2Q8TDI7 906 aa9.29□□□□□ -0.92
SV2B-205ENST00000557291 PSDA5PKW4 1024 aaPredicted RBP9.28□□□□□ -0.92
SV2B-205ENST00000557291 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
SV2B-205ENST00000557291 TK2O00142 265 aa9.25□□□□□ -0.93
SV2B-205ENST00000557291 NCAPD3P42695 1498 aa9.23□□□□□ -0.93
SV2B-205ENST00000557291 HRO43593 1189 aa9.23□□□□□ -0.93
SV2B-205ENST00000557291 PTCD2Q8WV60 388 aaKnown RBP9.23□□□□□ -0.93
SV2B-205ENST00000557291 DMRTA1Q5VZB9 504 aa9.2□□□□□ -0.94
SV2B-205ENST00000557291 PPP1R37O75864 691 aa9.19□□□□□ -0.94
SV2B-205ENST00000557291 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
SV2B-205ENST00000557291 PSEN2P49810 448 aa9.18□□□□□ -0.94
SV2B-205ENST00000557291 ERCC6Q03468 1493 aa9.17□□□□□ -0.94
SV2B-205ENST00000557291 ATAD2BQ9ULI0 1458 aa9.15□□□□□ -0.94
SV2B-205ENST00000557291 FOXK1P85037 733 aa9.15□□□□□ -0.94
SV2B-205ENST00000557291 PPP4R3BQ5MIZ7 849 aa9.15□□□□□ -0.94
SV2B-205ENST00000557291 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.94
SV2B-205ENST00000557291 RGL2O15211 777 aa9.14□□□□□ -0.95
SV2B-205ENST00000557291 KCTD12Q96CX2 325 aaKnown RBP9.14□□□□□ -0.95
SV2B-205ENST00000557291 PLPP6Q8IY26 295 aa9.13□□□□□ -0.95
SV2B-205ENST00000557291 STAC3Q96MF2 364 aa9.13□□□□□ -0.95
SV2B-205ENST00000557291 HMGXB3Q12766 1538 aa9.12□□□□□ -0.95
SV2B-205ENST00000557291 TBC1D12O60347 775 aa9.12□□□□□ -0.95
SV2B-205ENST00000557291 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
SV2B-205ENST00000557291 GPHNQ9NQX3 736 aaPredicted RBP9.12□□□□□ -0.95
SV2B-205ENST00000557291 PKD2Q13563 968 aa9.11□□□□□ -0.95
SV2B-205ENST00000557291 NESP48681 1621 aa9.11□□□□□ -0.95
SV2B-205ENST00000557291 SMARCA2P51531 1590 aa9.09□□□□□ -0.95
SV2B-205ENST00000557291 THOC2Q8NI27 1593 aaKnown RBP9.08□□□□□ -0.96
SV2B-205ENST00000557291 RGS20O76081 388 aa9.08□□□□□ -0.96
SV2B-205ENST00000557291 DSG2Q14126 1118 aa9.08□□□□□ -0.96
SV2B-205ENST00000557291 ERICH6Q7L0X2 663 aa9.08□□□□□ -0.96
SV2B-205ENST00000557291 KCNH8Q96L42 1107 aa9.08□□□□□ -0.96
SV2B-205ENST00000557291 KCNK17Q96T54 332 aa9.08□□□□□ -0.96
SV2B-205ENST00000557291 VPS9D1Q9Y2B5 631 aa9.08□□□□□ -0.96
SV2B-205ENST00000557291 SMARCA4P51532 1647 aa9.08□□□□□ -0.96
SV2B-205ENST00000557291 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
SV2B-205ENST00000557291 BCANQ96GW7 911 aa9.07□□□□□ -0.96
SV2B-205ENST00000557291 SLC4A5Q9BY07 1137 aa9.05□□□□□ -0.96
SV2B-205ENST00000557291 PTPN5P54829 565 aa9.04□□□□□ -0.96
SV2B-205ENST00000557291 PEG3Q9GZU2 1588 aa9.03□□□□□ -0.96
SV2B-205ENST00000557291 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
SV2B-205ENST00000557291 OXER1Q8TDS5 423 aa9.02□□□□□ -0.97
SV2B-205ENST00000557291 BAZ1BQ9UIG0 1483 aaKnown RBP9.02□□□□□ -0.97
SV2B-205ENST00000557291 BHMG1C9JSJ3 638 aaPredicted RBP9.01□□□□□ -0.97
SV2B-205ENST00000557291 BCL2L12Q9HB09 334 aa9.01□□□□□ -0.97
SV2B-205ENST00000557291 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms