RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, human

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC23A-213	ENST00000557280	ARHGAP5	Q13017	1502 aa		32.86	■■■□□ 2.85
SEC23A-213	ENST00000557280	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.86	■■■□□ 2.85
SEC23A-213	ENST00000557280	CFAP74	Q9C0B2	1584 aa		32.84	■■■□□ 2.85
SEC23A-213	ENST00000557280	AKNA	Q7Z591	1439 aa		32.82	■■■□□ 2.84
SEC23A-213	ENST00000557280	CCNB3	Q8WWL7	1395 aa		32.82	■■■□□ 2.84
SEC23A-213	ENST00000557280	PHLDB1	Q86UU1	1377 aa		32.77	■■■□□ 2.84
SEC23A-213	ENST00000557280	EFCAB2	Q5VUJ9	269 aa		32.76	■■■□□ 2.83
SEC23A-213	ENST00000557280	ADGRL1	O94910	1474 aa		32.74	■■■□□ 2.83
SEC23A-213	ENST00000557280	FRMPD1	Q5SYB0	1578 aa		32.74	■■■□□ 2.83
SEC23A-213	ENST00000557280	ITSN2	Q9NZM3	1697 aa		32.73	■■■□□ 2.83
SEC23A-213	ENST00000557280	SAMD9L	Q8IVG5	1584 aa		32.71	■■■□□ 2.83
SEC23A-213	ENST00000557280	RAPGEF3	O95398	923 aa		32.69	■■■□□ 2.82
SEC23A-213	ENST00000557280	SCAPER	Q9BY12	1400 aa		32.68	■■■□□ 2.82
SEC23A-213	ENST00000557280	ABCC1	P33527	1531 aa		32.68	■■■□□ 2.82
SEC23A-213	ENST00000557280	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.68	■■■□□ 2.82
SEC23A-213	ENST00000557280	DENND4B	O75064	1496 aa	Predicted RBP	32.67	■■■□□ 2.82
SEC23A-213	ENST00000557280	ARHGEF12	Q9NZN5	1544 aa		32.67	■■■□□ 2.82
SEC23A-213	ENST00000557280	RICTOR	Q6R327	1708 aa		32.66	■■■□□ 2.82
SEC23A-213	ENST00000557280	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.66	■■■□□ 2.82
SEC23A-213	ENST00000557280	POGZ	Q7Z3K3	1410 aa		32.63	■■■□□ 2.81
SEC23A-213	ENST00000557280	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.63	■■■□□ 2.81
SEC23A-213	ENST00000557280	MYOM3	Q5VTT5	1437 aa		32.61	■■■□□ 2.81
SEC23A-213	ENST00000557280	ZNF644	Q9H582	1327 aa	Predicted RBP	32.61	■■■□□ 2.81
SEC23A-213	ENST00000557280	SYCP2	Q9BX26	1530 aa		32.61	■■■□□ 2.81
SEC23A-213	ENST00000557280	TRAPPC8	Q9Y2L5	1435 aa		32.57	■■■□□ 2.8
SEC23A-213	ENST00000557280	CAMSAP2	Q08AD1	1489 aa		32.55	■■■□□ 2.8
SEC23A-213	ENST00000557280	ZMYM4	Q5VZL5	1548 aa		32.54	■■■□□ 2.8
SEC23A-213	ENST00000557280	ZNF518A	Q6AHZ1	1483 aa		32.52	■■■□□ 2.8
SEC23A-213	ENST00000557280	PLEKHH2	Q8IVE3	1493 aa		32.52	■■■□□ 2.8
SEC23A-213	ENST00000557280	KDM5C	P41229	1560 aa		32.52	■■■□□ 2.8
SEC23A-213	ENST00000557280	KIAA1107	Q9UPP5	1409 aa		32.51	■■■□□ 2.8
SEC23A-213	ENST00000557280	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.51	■■■□□ 2.79
SEC23A-213	ENST00000557280	AFAP1	Q8N556	730 aa		32.51	■■■□□ 2.79
SEC23A-213	ENST00000557280	MIA2	Q96PC5	1412 aa		32.5	■■■□□ 2.79
SEC23A-213	ENST00000557280	MBD5	Q9P267	1494 aa		32.48	■■■□□ 2.79
SEC23A-213	ENST00000557280	FGD6	Q6ZV73	1430 aa		32.47	■■■□□ 2.79
SEC23A-213	ENST00000557280	YEATS2	Q9ULM3	1422 aa		32.44	■■■□□ 2.78
SEC23A-213	ENST00000557280	ARHGEF40	Q8TER5	1519 aa		32.44	■■■□□ 2.78
SEC23A-213	ENST00000557280	PTPN23	Q9H3S7	1636 aa		32.44	■■■□□ 2.78
SEC23A-213	ENST00000557280	ZFYVE16	Q7Z3T8	1539 aa		32.42	■■■□□ 2.78
SEC23A-213	ENST00000557280	HECW2	Q9P2P5	1572 aa		32.41	■■■□□ 2.78
SEC23A-213	ENST00000557280	TCOF1	Q13428	1488 aa	Known RBP	32.39	■■■□□ 2.78
SEC23A-213	ENST00000557280	MAGI2	Q86UL8	1455 aa		32.38	■■■□□ 2.77
SEC23A-213	ENST00000557280	ARHGEF5	Q12774	1597 aa		32.36	■■■□□ 2.77
SEC23A-213	ENST00000557280	MLH3	Q9UHC1	1453 aa		32.36	■■■□□ 2.77
SEC23A-213	ENST00000557280	CCDC141	Q6ZP82	1450 aa		32.35	■■■□□ 2.77
SEC23A-213	ENST00000557280	KIDINS220	Q9ULH0	1771 aa		32.35	■■■□□ 2.77
SEC23A-213	ENST00000557280	INO80	Q9ULG1	1556 aa	Predicted RBP	32.34	■■■□□ 2.77
SEC23A-213	ENST00000557280	ABCA6	Q8N139	1617 aa		32.33	■■■□□ 2.77
SEC23A-213	ENST00000557280	DIP2C	Q9Y2E4	1556 aa		32.32	■■■□□ 2.76
SEC23A-213	ENST00000557280	ATP7A	Q04656	1500 aa		32.31	■■■□□ 2.76
SEC23A-213	ENST00000557280	SPAG9	O60271	1321 aa	Known RBP	32.3	■■■□□ 2.76
SEC23A-213	ENST00000557280	SIGLEC1	Q9BZZ2	1709 aa		32.3	■■■□□ 2.76
SEC23A-213	ENST00000557280	MYT1L	Q9UL68	1186 aa		32.27	■■■□□ 2.76
SEC23A-213	ENST00000557280	ATP10A	O60312	1499 aa		32.24	■■■□□ 2.75
SEC23A-213	ENST00000557280	DNMT1	P26358	1616 aa	Known RBP	32.24	■■■□□ 2.75
SEC23A-213	ENST00000557280	FAM50A	Q14320	339 aa	Known RBP	32.23	■■■□□ 2.75
SEC23A-213	ENST00000557280	ABCC5	O15440	1437 aa		32.23	■■■□□ 2.75
SEC23A-213	ENST00000557280	CROCC2	H7BZ55	1655 aa		32.22	■■■□□ 2.75
SEC23A-213	ENST00000557280	C9orf84	Q5VXU9	1444 aa		32.22	■■■□□ 2.75
SEC23A-213	ENST00000557280	DAPK1	P53355	1430 aa		32.21	■■■□□ 2.75
SEC23A-213	ENST00000557280	RSPH4A	Q5TD94	716 aa		32.21	■■■□□ 2.75
SEC23A-213	ENST00000557280	MAST1	Q9Y2H9	1570 aa		32.19	■■■□□ 2.74
SEC23A-213	ENST00000557280	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.19	■■■□□ 2.74
SEC23A-213	ENST00000557280	RRBP1	Q9P2E9	1410 aa	Known RBP	32.17	■■■□□ 2.74
SEC23A-213	ENST00000557280	SHANK2	Q9UPX8	1470 aa		32.16	■■■□□ 2.74
SEC23A-213	ENST00000557280	RERE	Q9P2R6	1566 aa		32.15	■■■□□ 2.74
SEC23A-213	ENST00000557280	TSPY4	P0CV99	314 aa		32.13	■■■□□ 2.73
SEC23A-213	ENST00000557280	TSPY10	P0CW01	314 aa		32.13	■■■□□ 2.73
SEC23A-213	ENST00000557280	ADGB	Q8N7X0	1667 aa		32.13	■■■□□ 2.73
SEC23A-213	ENST00000557280	PLXNC1	O60486	1568 aa		32.11	■■■□□ 2.73
SEC23A-213	ENST00000557280	ARID4B	Q4LE39	1312 aa	Predicted RBP	32.1	■■■□□ 2.73
SEC23A-213	ENST00000557280	A2M	P01023	1474 aa		32.09	■■■□□ 2.73
SEC23A-213	ENST00000557280	PTPRK	Q15262	1439 aa		32.09	■■■□□ 2.73
SEC23A-213	ENST00000557280	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.07	■■■□□ 2.73
SEC23A-213	ENST00000557280	BCORL1	Q5H9F3	1711 aa		32.07	■■■□□ 2.72
SEC23A-213	ENST00000557280	KDM4F	A0A1W2PPD8	638 aa		32.06	■■■□□ 2.72
SEC23A-213	ENST00000557280	AGL	P35573	1532 aa		32.05	■■■□□ 2.72
SEC23A-213	ENST00000557280	CHIC2	Q9UKJ5	165 aa		32.04	■■■□□ 2.72
SEC23A-213	ENST00000557280	ADAMTSL3	P82987	1691 aa		32	■■■□□ 2.71
SEC23A-213	ENST00000557280	ADGRL2	O95490	1459 aa		31.99	■■■□□ 2.71
SEC23A-213	ENST00000557280	DHX29	Q7Z478	1369 aa	Known RBP	31.99	■■■□□ 2.71
SEC23A-213	ENST00000557280	ITGAE	P38570	1179 aa		31.99	■■■□□ 2.71
SEC23A-213	ENST00000557280	MLEC	Q14165	292 aa		31.99	■■■□□ 2.71
SEC23A-213	ENST00000557280	KIF15	Q9NS87	1388 aa		31.97	■■■□□ 2.71
SEC23A-213	ENST00000557280	MADD	Q8WXG6	1647 aa		31.96	■■■□□ 2.71
SEC23A-213	ENST00000557280	NCOA1	Q15788	1441 aa		31.95	■■■□□ 2.71
SEC23A-213	ENST00000557280	RRP7BP	Q9NSQ0	103 aa		31.95	■■■□□ 2.71
SEC23A-213	ENST00000557280	ANKRD30A	Q9BXX3	1397 aa		31.94	■■■□□ 2.7
SEC23A-213	ENST00000557280	DUOX2	Q9NRD8	1548 aa		31.93	■■■□□ 2.7
SEC23A-213	ENST00000557280	FER1L4	A9Z1Z3	1794 aa		31.86	■■■□□ 2.69
SEC23A-213	ENST00000557280	RIMS1	Q86UR5	1692 aa	Known RBP	31.86	■■■□□ 2.69
SEC23A-213	ENST00000557280	ROCK1	Q13464	1354 aa		31.85	■■■□□ 2.69
SEC23A-213	ENST00000557280	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.85	■■■□□ 2.69
SEC23A-213	ENST00000557280	KIF3B	O15066	747 aa		31.84	■■■□□ 2.69
SEC23A-213	ENST00000557280	ERBIN	Q96RT1	1412 aa		31.83	■■■□□ 2.69
SEC23A-213	ENST00000557280	RNF17	Q9BXT8	1623 aa	Known RBP	31.8	■■■□□ 2.68
SEC23A-213	ENST00000557280	GGT6	Q6P531	493 aa		31.8	■■■□□ 2.68
SEC23A-213	ENST00000557280	MROH1	Q8NDA8	1641 aa		31.78	■■■□□ 2.68
SEC23A-213	ENST00000557280	PTPRM	P28827	1452 aa		31.78	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms