RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 RYDENQ9NUL5 291 aaKnown RBP10.59□□□□□ -0.71
FOXN3-215ENST00000557261 POTEFA5A3E0 1075 aa10.58□□□□□ -0.72
FOXN3-215ENST00000557261 BICRAQ9NZM4 1560 aa10.57□□□□□ -0.72
FOXN3-215ENST00000557261 POTEJP0CG39 1038 aa10.57□□□□□ -0.72
FOXN3-215ENST00000557261 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
FOXN3-215ENST00000557261 SEMA3EO15041 775 aa10.54□□□□□ -0.72
FOXN3-215ENST00000557261 PCDHB8Q9UN66 801 aa10.54□□□□□ -0.72
FOXN3-215ENST00000557261 SEC24BO95487 1268 aa10.53□□□□□ -0.72
FOXN3-215ENST00000557261 COLQQ9Y215 455 aaPredicted RBP10.53□□□□□ -0.72
FOXN3-215ENST00000557261 IER5LQ5T953 404 aa10.52□□□□□ -0.73
FOXN3-215ENST00000557261 PPP1R37O75864 691 aa10.51□□□□□ -0.73
FOXN3-215ENST00000557261 MAMSTRQ6ZN01 415 aa10.51□□□□□ -0.73
FOXN3-215ENST00000557261 MFRPQ9BY79 579 aa10.5□□□□□ -0.73
FOXN3-215ENST00000557261 SCUBE2Q9NQ36 999 aa10.49□□□□□ -0.73
FOXN3-215ENST00000557261 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
FOXN3-215ENST00000557261 ZNF467Q7Z7K2 595 aaPredicted RBP10.48□□□□□ -0.73
FOXN3-215ENST00000557261 ARHGEF1Q92888 912 aaKnown RBP10.46□□□□□ -0.73
FOXN3-215ENST00000557261 BAZ1AQ9NRL2 1556 aaPredicted RBP10.46□□□□□ -0.74
FOXN3-215ENST00000557261 PLCG2P16885 1265 aa10.44□□□□□ -0.74
FOXN3-215ENST00000557261 UBTFP17480 764 aaKnown RBP10.44□□□□□ -0.74
FOXN3-215ENST00000557261 IRX5P78411 483 aaPredicted RBP10.42□□□□□ -0.74
FOXN3-215ENST00000557261 E2F4Q16254 413 aa10.42□□□□□ -0.74
FOXN3-215ENST00000557261 ZMYND10O75800 440 aa10.41□□□□□ -0.74
FOXN3-215ENST00000557261 SMARCA4P51532 1647 aa10.4□□□□□ -0.74
FOXN3-215ENST00000557261 PODXL2Q9NZ53 605 aa10.4□□□□□ -0.74
FOXN3-215ENST00000557261 PDAP1Q13442 181 aaKnown RBP10.39□□□□□ -0.75
FOXN3-215ENST00000557261 GPBP1L1Q9HC44 474 aaPredicted RBP10.39□□□□□ -0.75
FOXN3-215ENST00000557261 PSEN1P49768 467 aa10.38□□□□□ -0.75
FOXN3-215ENST00000557261 RSF1Q96T23 1441 aaPredicted RBP10.37□□□□□ -0.75
FOXN3-215ENST00000557261 PEG3Q9GZU2 1588 aa10.37□□□□□ -0.75
FOXN3-215ENST00000557261 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
FOXN3-215ENST00000557261 CECR2Q9BXF3 1484 aa10.36□□□□□ -0.75
FOXN3-215ENST00000557261 NCKAP5LQ9HCH0 1330 aa10.35□□□□□ -0.75
FOXN3-215ENST00000557261 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
FOXN3-215ENST00000557261 FBXO22Q8NEZ5 403 aa10.35□□□□□ -0.75
FOXN3-215ENST00000557261 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
FOXN3-215ENST00000557261 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
FOXN3-215ENST00000557261 POTEMA6NI47 508 aa10.32□□□□□ -0.76
FOXN3-215ENST00000557261 MKRN3Q13064 507 aaKnown RBP10.32□□□□□ -0.76
FOXN3-215ENST00000557261 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
FOXN3-215ENST00000557261 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
FOXN3-215ENST00000557261 IL27Q8NEV9 243 aa10.32□□□□□ -0.76
FOXN3-215ENST00000557261 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
FOXN3-215ENST00000557261 POTEGQ6S5H5 508 aa10.3□□□□□ -0.76
FOXN3-215ENST00000557261 PDCD7Q8N8D1 485 aaKnown RBP10.3□□□□□ -0.76
FOXN3-215ENST00000557261 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
FOXN3-215ENST00000557261 RBM26Q5T8P6 1007 aaKnown RBP10.29□□□□□ -0.76
FOXN3-215ENST00000557261 SLAIN1Q8ND83 568 aa10.29□□□□□ -0.76
FOXN3-215ENST00000557261 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
FOXN3-215ENST00000557261 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
FOXN3-215ENST00000557261 CABP2Q9NPB3 220 aa10.27□□□□□ -0.77
FOXN3-215ENST00000557261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.77
FOXN3-215ENST00000557261 WIZO95785 1651 aa10.27□□□□□ -0.77
FOXN3-215ENST00000557261 SMARCA2P51531 1590 aa10.26□□□□□ -0.77
FOXN3-215ENST00000557261 MLLT3P42568 568 aaPredicted RBP10.26□□□□□ -0.77
FOXN3-215ENST00000557261 ZMYND15Q9H091 742 aa10.26□□□□□ -0.77
FOXN3-215ENST00000557261 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
FOXN3-215ENST00000557261 EIF4G1Q04637 1599 aaKnown RBP10.25□□□□□ -0.77
FOXN3-215ENST00000557261 ARID3AQ99856 593 aa10.24□□□□□ -0.77
FOXN3-215ENST00000557261 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
FOXN3-215ENST00000557261 HRCP23327 699 aa10.23□□□□□ -0.77
FOXN3-215ENST00000557261 NLRP6P59044 892 aa10.23□□□□□ -0.77
FOXN3-215ENST00000557261 AK7Q96M32 723 aa10.23□□□□□ -0.77
FOXN3-215ENST00000557261 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
FOXN3-215ENST00000557261 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.22□□□□□ -0.77
FOXN3-215ENST00000557261 MFSD10Q14728 455 aa10.21□□□□□ -0.77
FOXN3-215ENST00000557261 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
FOXN3-215ENST00000557261 HMGXB3Q12766 1538 aa10.21□□□□□ -0.78
FOXN3-215ENST00000557261 CC2D2AQ9P2K1 1620 aa10.21□□□□□ -0.78
FOXN3-215ENST00000557261 C3orf67Q6ZVT6 689 aa10.2□□□□□ -0.78
FOXN3-215ENST00000557261 RSPH6AQ9H0K4 717 aa10.2□□□□□ -0.78
FOXN3-215ENST00000557261 SMYD5Q6GMV2 418 aa10.19□□□□□ -0.78
FOXN3-215ENST00000557261 ILDR1Q86SU0 546 aaPredicted RBP10.19□□□□□ -0.78
FOXN3-215ENST00000557261 KRI1Q8N9T8 703 aaKnown RBP10.19□□□□□ -0.78
FOXN3-215ENST00000557261 GPIHBP1Q8IV16 184 aa10.18□□□□□ -0.78
FOXN3-215ENST00000557261 L3MBTL3Q96JM7 780 aaPredicted RBP10.18□□□□□ -0.78
FOXN3-215ENST00000557261 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
FOXN3-215ENST00000557261 PLSCR2Q9NRY7 297 aa10.18□□□□□ -0.78
FOXN3-215ENST00000557261 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
FOXN3-215ENST00000557261 TRIM66O15016 1216 aa10.17□□□□□ -0.78
FOXN3-215ENST00000557261 SOX12O15370 315 aa10.16□□□□□ -0.78
FOXN3-215ENST00000557261 DPY19L2Q6NUT2 758 aa10.16□□□□□ -0.78
FOXN3-215ENST00000557261 ARIH1Q9Y4X5 557 aaPredicted RBP10.16□□□□□ -0.78
FOXN3-215ENST00000557261 ARID3CA6NKF2 412 aa10.15□□□□□ -0.78
FOXN3-215ENST00000557261 PDE4AP27815 886 aa10.15□□□□□ -0.78
FOXN3-215ENST00000557261 PDE4DQ08499 809 aa10.15□□□□□ -0.78
FOXN3-215ENST00000557261 DDX27Q96GQ7 796 aaKnown RBP10.15□□□□□ -0.78
FOXN3-215ENST00000557261 CAMK2BQ13554 666 aa10.14□□□□□ -0.79
FOXN3-215ENST00000557261 NCAPD3P42695 1498 aa10.14□□□□□ -0.79
FOXN3-215ENST00000557261 ST18O60284 1047 aa10.13□□□□□ -0.79
FOXN3-215ENST00000557261 FAM117AQ9C073 453 aa10.13□□□□□ -0.79
FOXN3-215ENST00000557261 BAZ1BQ9UIG0 1483 aaKnown RBP10.12□□□□□ -0.79
FOXN3-215ENST00000557261 G3V3G9 751 aa10.11□□□□□ -0.79
FOXN3-215ENST00000557261 BOLA1Q9Y3E2 137 aa10.1□□□□□ -0.79
FOXN3-215ENST00000557261 PLEKHG3A1L390 1219 aa10.08□□□□□ -0.8
FOXN3-215ENST00000557261 SNPHO15079 494 aa10.08□□□□□ -0.8
FOXN3-215ENST00000557261 PCDH10Q9P2E7 1040 aa10.08□□□□□ -0.8
FOXN3-215ENST00000557261 GPR37O15354 613 aa10.07□□□□□ -0.8
FOXN3-215ENST00000557261 RANGAP1P46060 587 aaPredicted RBP10.06□□□□□ -0.8
FOXN3-215ENST00000557261 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms