RNA–Protein interactions for RNA: ENST00000557246.1

AL355103.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355103.1, Length 2,226 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355103.1-201ENST00000557246 DHX57Q6P158 1386 aaKnown RBP11.59□□□□□ -0.55
AL355103.1-201ENST00000557246 USP35Q9P2H5 1018 aa11.59□□□□□ -0.55
AL355103.1-201ENST00000557246 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
AL355103.1-201ENST00000557246 PPP4R2Q9NY27 417 aa11.59□□□□□ -0.55
AL355103.1-201ENST00000557246 WASHC2CQ9Y4E1 1318 aa11.58□□□□□ -0.56
AL355103.1-201ENST00000557246 HECW1Q76N89 1606 aa11.57□□□□□ -0.56
AL355103.1-201ENST00000557246 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
AL355103.1-201ENST00000557246 RRBP1Q9P2E9 1410 aaKnown RBP11.56□□□□□ -0.56
AL355103.1-201ENST00000557246 IPO9Q96P70 1041 aaKnown RBP11.56□□□□□ -0.56
AL355103.1-201ENST00000557246 LRRIQ1Q96JM4 1722 aa11.55□□□□□ -0.56
AL355103.1-201ENST00000557246 ANP32AP39687 249 aaKnown RBP11.55□□□□□ -0.56
AL355103.1-201ENST00000557246 PLEKHG5O94827 1062 aa11.54□□□□□ -0.56
AL355103.1-201ENST00000557246 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
AL355103.1-201ENST00000557246 EPRSP07814 1512 aaKnown RBP11.53□□□□□ -0.56
AL355103.1-201ENST00000557246 MTUS2Q5JR59 1369 aa11.53□□□□□ -0.56
AL355103.1-201ENST00000557246 PRG4Q92954 1404 aaPredicted RBP11.53□□□□□ -0.56
AL355103.1-201ENST00000557246 TRIM52Q96A61 297 aa11.52□□□□□ -0.56
AL355103.1-201ENST00000557246 CCNB3Q8WWL7 1395 aa11.52□□□□□ -0.57
AL355103.1-201ENST00000557246 SHROOM2Q13796 1616 aa11.52□□□□□ -0.57
AL355103.1-201ENST00000557246 RAPGEF6Q8TEU7 1601 aa11.52□□□□□ -0.57
AL355103.1-201ENST00000557246 PHLDB1Q86UU1 1377 aa11.51□□□□□ -0.57
AL355103.1-201ENST00000557246 EHBP1L1Q8N3D4 1523 aa11.5□□□□□ -0.57
AL355103.1-201ENST00000557246 NUP153P49790 1475 aaKnown RBP11.5□□□□□ -0.57
AL355103.1-201ENST00000557246 CLASP1Q7Z460 1538 aa11.49□□□□□ -0.57
AL355103.1-201ENST00000557246 CDK13Q14004 1512 aaKnown RBP11.48□□□□□ -0.57
AL355103.1-201ENST00000557246 ANP32CO43423 234 aa11.48□□□□□ -0.57
AL355103.1-201ENST00000557246 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
AL355103.1-201ENST00000557246 SUPT6HQ7KZ85 1726 aaKnown RBP11.47□□□□□ -0.57
AL355103.1-201ENST00000557246 ZMYND15Q9H091 742 aa11.47□□□□□ -0.57
AL355103.1-201ENST00000557246 MAGI3Q5TCQ9 1506 aa11.47□□□□□ -0.57
AL355103.1-201ENST00000557246 PTPRGP23470 1445 aa11.47□□□□□ -0.57
AL355103.1-201ENST00000557246 ABCA8O94911 1581 aa11.47□□□□□ -0.57
AL355103.1-201ENST00000557246 NCOA2Q15596 1464 aa11.46□□□□□ -0.57
AL355103.1-201ENST00000557246 PPP1R15AO75807 674 aaPredicted RBP11.46□□□□□ -0.57
AL355103.1-201ENST00000557246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.46□□□□□ -0.58
AL355103.1-201ENST00000557246 ARHGEF11O15085 1522 aa11.45□□□□□ -0.58
AL355103.1-201ENST00000557246 DDX10Q13206 875 aaKnown RBP11.45□□□□□ -0.58
AL355103.1-201ENST00000557246 FGD6Q6ZV73 1430 aa11.43□□□□□ -0.58
AL355103.1-201ENST00000557246 ARID3CA6NKF2 412 aa11.43□□□□□ -0.58
AL355103.1-201ENST00000557246 PPM1GO15355 546 aaPredicted RBP11.43□□□□□ -0.58
AL355103.1-201ENST00000557246 NCBP3Q53F19 620 aaKnown RBP11.43□□□□□ -0.58
AL355103.1-201ENST00000557246 FAM43AQ8N2R8 423 aa11.43□□□□□ -0.58
AL355103.1-201ENST00000557246 MYOM3Q5VTT5 1437 aa11.43□□□□□ -0.58
AL355103.1-201ENST00000557246 NEFMP07197 916 aa11.42□□□□□ -0.58
AL355103.1-201ENST00000557246 IRX6P78412 446 aaPredicted RBP11.42□□□□□ -0.58
AL355103.1-201ENST00000557246 VSIG10Q8N0Z9 540 aa11.42□□□□□ -0.58
AL355103.1-201ENST00000557246 FAM50AQ14320 339 aaKnown RBP11.41□□□□□ -0.58
AL355103.1-201ENST00000557246 BRPF3Q9ULD4 1205 aa11.41□□□□□ -0.58
AL355103.1-201ENST00000557246 TROQ12816 1431 aaPredicted RBP11.4□□□□□ -0.58
AL355103.1-201ENST00000557246 UACAQ9BZF9 1416 aa11.4□□□□□ -0.58
AL355103.1-201ENST00000557246 ATP10BO94823 1461 aa11.4□□□□□ -0.58
AL355103.1-201ENST00000557246 ERCC6L2Q5T890 1561 aa11.4□□□□□ -0.58
AL355103.1-201ENST00000557246 PPP4R3CPQ6ZMV5 832 aa11.4□□□□□ -0.58
AL355103.1-201ENST00000557246 TIMELESSQ9UNS1 1208 aa11.4□□□□□ -0.58
AL355103.1-201ENST00000557246 OSCARQ8IYS5 282 aa11.39□□□□□ -0.59
AL355103.1-201ENST00000557246 GSE1Q14687 1217 aa11.39□□□□□ -0.59
AL355103.1-201ENST00000557246 PLEKHD1A6NEE1 506 aa11.38□□□□□ -0.59
AL355103.1-201ENST00000557246 MIA2Q96PC5 1412 aa11.38□□□□□ -0.59
AL355103.1-201ENST00000557246 B4GALNT3Q6L9W6 998 aa11.37□□□□□ -0.59
AL355103.1-201ENST00000557246 HNRNPUQ00839 825 aaKnown RBP eCLIP11.36□□□□□ -0.59
AL355103.1-201ENST00000557246 TCOF1Q13428 1488 aaKnown RBP11.36□□□□□ -0.59
AL355103.1-201ENST00000557246 ADCY10Q96PN6 1610 aa11.36□□□□□ -0.59
AL355103.1-201ENST00000557246 PTPN23Q9H3S7 1636 aa11.36□□□□□ -0.59
AL355103.1-201ENST00000557246 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
AL355103.1-201ENST00000557246 NPM3O75607 178 aaKnown RBP11.35□□□□□ -0.59
AL355103.1-201ENST00000557246 UHRF1BP1LA0JNW5 1464 aa11.34□□□□□ -0.59
AL355103.1-201ENST00000557246 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
AL355103.1-201ENST00000557246 SETD5Q9C0A6 1442 aa11.33□□□□□ -0.6
AL355103.1-201ENST00000557246 KIF14Q15058 1648 aa11.31□□□□□ -0.6
AL355103.1-201ENST00000557246 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
AL355103.1-201ENST00000557246 GPATCH8Q9UKJ3 1502 aaKnown RBP11.3□□□□□ -0.6
AL355103.1-201ENST00000557246 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
AL355103.1-201ENST00000557246 ABCC10Q5T3U5 1492 aa11.3□□□□□ -0.6
AL355103.1-201ENST00000557246 PTPRKQ15262 1439 aa11.3□□□□□ -0.6
AL355103.1-201ENST00000557246 KDM5BQ9UGL1 1544 aa11.29□□□□□ -0.6
AL355103.1-201ENST00000557246 CFDP1Q9UEE9 299 aaPredicted RBP11.29□□□□□ -0.6
AL355103.1-201ENST00000557246 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
AL355103.1-201ENST00000557246 HSP90AA2PQ14568 343 aaPredicted RBP11.28□□□□□ -0.6
AL355103.1-201ENST00000557246 MAPKBP1O60336 1514 aa11.28□□□□□ -0.6
AL355103.1-201ENST00000557246 HFM1A2PYH4 1435 aa11.27□□□□□ -0.61
AL355103.1-201ENST00000557246 ZCCHC11Q5TAX3 1644 aaKnown RBP11.26□□□□□ -0.61
AL355103.1-201ENST00000557246 CDC42BPAQ5VT25 1732 aa11.25□□□□□ -0.61
AL355103.1-201ENST00000557246 ZNF644Q9H582 1327 aaPredicted RBP11.25□□□□□ -0.61
AL355103.1-201ENST00000557246 FRAT1Q92837 279 aaPredicted RBP11.25□□□□□ -0.61
AL355103.1-201ENST00000557246 AKNAQ7Z591 1439 aa11.24□□□□□ -0.61
AL355103.1-201ENST00000557246 DNMT1P26358 1616 aaKnown RBP11.24□□□□□ -0.61
AL355103.1-201ENST00000557246 CAMSAP2Q08AD1 1489 aa11.24□□□□□ -0.61
AL355103.1-201ENST00000557246 DAPK1P53355 1430 aa11.24□□□□□ -0.61
AL355103.1-201ENST00000557246 NAIPQ13075 1403 aa11.24□□□□□ -0.61
AL355103.1-201ENST00000557246 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
AL355103.1-201ENST00000557246 ABCC5O15440 1437 aa11.23□□□□□ -0.61
AL355103.1-201ENST00000557246 HSP90AA1P07900 732 aaKnown RBP11.23□□□□□ -0.61
AL355103.1-201ENST00000557246 FGD1P98174 961 aa11.23□□□□□ -0.61
AL355103.1-201ENST00000557246 ROCK1Q13464 1354 aa11.22□□□□□ -0.61
AL355103.1-201ENST00000557246 ZBED9Q6R2W3 1325 aa11.22□□□□□ -0.61
AL355103.1-201ENST00000557246 AAMPQ13685 434 aa11.21□□□□□ -0.61
AL355103.1-201ENST00000557246 CHIC2Q9UKJ5 165 aa11.21□□□□□ -0.61
AL355103.1-201ENST00000557246 ZNF777Q9ULD5 760 aaPredicted RBP11.21□□□□□ -0.61
AL355103.1-201ENST00000557246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.21□□□□□ -0.61
AL355103.1-201ENST00000557246 RBM10P98175 930 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms