RNA–Protein interactions for RNA: ENST00000557087.5

PSMA3-211, Transcript of proteasome subunit alpha 3, humanhuman

TSL 3

Gene PSMA3, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-211ENST00000557087 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
PSMA3-211ENST00000557087 SPNS2Q8IVW8 549 aa12.58□□□□□ -0.4
PSMA3-211ENST00000557087 KRTAP3-3Q9BYR6 98 aa12.58□□□□□ -0.4
PSMA3-211ENST00000557087 KRTAP3-2Q9BYR7 98 aa12.58□□□□□ -0.4
PSMA3-211ENST00000557087 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
PSMA3-211ENST00000557087 ZNF710Q8N1W2 664 aa12.53□□□□□ -0.4
PSMA3-211ENST00000557087 MMRN1Q13201 1228 aa12.51□□□□□ -0.41
PSMA3-211ENST00000557087 GPR153Q6NV75 609 aa12.51□□□□□ -0.41
PSMA3-211ENST00000557087 KIF3CO14782 793 aa12.49□□□□□ -0.41
PSMA3-211ENST00000557087 PPP1R37O75864 691 aa12.49□□□□□ -0.41
PSMA3-211ENST00000557087 ZSWIM6Q9HCJ5 1215 aa12.45□□□□□ -0.42
PSMA3-211ENST00000557087 ERBB3P21860 1342 aa12.44□□□□□ -0.42
PSMA3-211ENST00000557087 C2orf72A6NCS6 295 aa12.44□□□□□ -0.42
PSMA3-211ENST00000557087 RIMBP2O15034 1052 aa12.42□□□□□ -0.42
PSMA3-211ENST00000557087 ARSIQ5FYB1 569 aa12.42□□□□□ -0.42
PSMA3-211ENST00000557087 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.428e-8■■■□□ 15.9
PSMA3-211ENST00000557087 VARS2Q5ST30 1063 aaKnown RBP12.41□□□□□ -0.42
PSMA3-211ENST00000557087 HS6ST3Q8IZP7 471 aa12.37□□□□□ -0.43
PSMA3-211ENST00000557087 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
PSMA3-211ENST00000557087 ZNF687Q8N1G0 1237 aa12.32□□□□□ -0.44
PSMA3-211ENST00000557087 CHGAP10645 457 aaKnown RBP12.3□□□□□ -0.44
PSMA3-211ENST00000557087 ZNF316A6NFI3 1004 aaPredicted RBP12.29□□□□□ -0.44
PSMA3-211ENST00000557087 SLC34A2O95436 690 aa12.28□□□□□ -0.44
PSMA3-211ENST00000557087 TMC2Q8TDI7 906 aa12.27□□□□□ -0.45
PSMA3-211ENST00000557087 NUDT7P0C024 238 aa12.26□□□□□ -0.45
PSMA3-211ENST00000557087 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
PSMA3-211ENST00000557087 PCDHGA4Q9Y5G9 962 aa12.26□□□□□ -0.45
PSMA3-211ENST00000557087 KDM4FA0A1W2PPD8 638 aa12.21□□□□□ -0.45
PSMA3-211ENST00000557087 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
PSMA3-211ENST00000557087 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
PSMA3-211ENST00000557087 GPHNQ9NQX3 736 aaPredicted RBP12.19□□□□□ -0.46
PSMA3-211ENST00000557087 FOXK1P85037 733 aa12.18□□□□□ -0.46
PSMA3-211ENST00000557087 DSG2Q14126 1118 aa12.17□□□□□ -0.46
PSMA3-211ENST00000557087 PLPP6Q8IY26 295 aa12.16□□□□□ -0.46
PSMA3-211ENST00000557087 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
PSMA3-211ENST00000557087 ANKRD13DQ6ZTN6 518 aa12.12□□□□□ -0.47
PSMA3-211ENST00000557087 AXIN2Q9Y2T1 843 aa12.12□□□□□ -0.47
PSMA3-211ENST00000557087 LSM11P83369 360 aaKnown RBP eCLIP12.11□□□□□ -0.47
PSMA3-211ENST00000557087 RNF166Q96A37 237 aaPredicted RBP12.1□□□□□ -0.47
PSMA3-211ENST00000557087 MYT1LQ9UL68 1186 aa12.1□□□□□ -0.47
PSMA3-211ENST00000557087 GTPBP6O43824 516 aaPredicted RBP12.09□□□□□ -0.47
PSMA3-211ENST00000557087 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
PSMA3-211ENST00000557087 NCKAP5LQ9HCH0 1330 aa12.06□□□□□ -0.48
PSMA3-211ENST00000557087 PBX2P40425 430 aa12.05□□□□□ -0.48
PSMA3-211ENST00000557087 OXER1Q8TDS5 423 aa12.02□□□□□ -0.49
PSMA3-211ENST00000557087 RYDENQ9NUL5 291 aaKnown RBP12□□□□□ -0.49
PSMA3-211ENST00000557087 PTGER2P43116 358 aa11.99□□□□□ -0.49
PSMA3-211ENST00000557087 ARHGAP33O14559 1287 aa11.98□□□□□ -0.49
PSMA3-211ENST00000557087 PSEN2P49810 448 aa11.98□□□□□ -0.49
PSMA3-211ENST00000557087 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
PSMA3-211ENST00000557087 DMRTA1Q5VZB9 504 aa11.98□□□□□ -0.49
PSMA3-211ENST00000557087 PSDA5PKW4 1024 aaPredicted RBP11.97□□□□□ -0.49
PSMA3-211ENST00000557087 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.49
PSMA3-211ENST00000557087 TBC1D12O60347 775 aa11.95□□□□□ -0.5
PSMA3-211ENST00000557087 ADGRD1Q6QNK2 874 aa11.94□□□□□ -0.5
PSMA3-211ENST00000557087 PDE4AP27815 886 aa11.93□□□□□ -0.5
PSMA3-211ENST00000557087 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
PSMA3-211ENST00000557087 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
PSMA3-211ENST00000557087 HRO43593 1189 aa11.9□□□□□ -0.5
PSMA3-211ENST00000557087 LARP6Q9BRS8 491 aaKnown RBP11.9□□□□□ -0.5
PSMA3-211ENST00000557087 MFSD10Q14728 455 aa11.89□□□□□ -0.51
PSMA3-211ENST00000557087 PPP4R3BQ5MIZ7 849 aa11.89□□□□□ -0.51
PSMA3-211ENST00000557087 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
PSMA3-211ENST00000557087 TK2O00142 265 aa11.87□□□□□ -0.51
PSMA3-211ENST00000557087 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
PSMA3-211ENST00000557087 FOSBP53539 338 aa11.85□□□□□ -0.51
PSMA3-211ENST00000557087 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
PSMA3-211ENST00000557087 KCNK17Q96T54 332 aa11.85□□□□□ -0.51
PSMA3-211ENST00000557087 ZNF454Q8N9F8 522 aa11.84□□□□□ -0.51
PSMA3-211ENST00000557087 EVI5O60447 810 aa11.82□□□□□ -0.52
PSMA3-211ENST00000557087 BCL2L12Q9HB09 334 aa11.81□□□□□ -0.52
PSMA3-211ENST00000557087 VPS9D1Q9Y2B5 631 aa11.8□□□□□ -0.52
PSMA3-211ENST00000557087 ADAM33Q9BZ11 813 aa11.77□□□□□ -0.53
PSMA3-211ENST00000557087 JPH4Q96JJ6 628 aa11.76□□□□□ -0.53
PSMA3-211ENST00000557087 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
PSMA3-211ENST00000557087 HCSTQ9UBK5 93 aa11.74□□□□□ -0.53
PSMA3-211ENST00000557087 ZDHHC16Q969W1 377 aa11.73□□□□□ -0.53
PSMA3-211ENST00000557087 ZBED2Q9BTP6 218 aa11.73□□□□□ -0.53
PSMA3-211ENST00000557087 SLC4A5Q9BY07 1137 aa11.73□□□□□ -0.53
PSMA3-211ENST00000557087 BHMG1C9JSJ3 638 aaPredicted RBP11.72□□□□□ -0.53
PSMA3-211ENST00000557087 PCDHGA10Q9Y5H3 936 aa11.72□□□□□ -0.53
PSMA3-211ENST00000557087 CAMK2BQ13554 666 aa11.71□□□□□ -0.53
PSMA3-211ENST00000557087 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
PSMA3-211ENST00000557087 KCTD12Q96CX2 325 aaKnown RBP11.71□□□□□ -0.53
PSMA3-211ENST00000557087 PTPREP23469 700 aa11.7□□□□□ -0.54
PSMA3-211ENST00000557087 KCNH8Q96L42 1107 aa11.67□□□□□ -0.54
PSMA3-211ENST00000557087 PLA2G2EQ9NZK7 142 aa11.67□□□□□ -0.54
PSMA3-211ENST00000557087 COL9A1P20849 921 aa11.65□□□□□ -0.54
PSMA3-211ENST00000557087 DPYSL4O14531 572 aa11.64□□□□□ -0.55
PSMA3-211ENST00000557087 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
PSMA3-211ENST00000557087 STAC3Q96MF2 364 aa11.62□□□□□ -0.55
PSMA3-211ENST00000557087 PHF14O94880 888 aa11.61□□□□□ -0.55
PSMA3-211ENST00000557087 PROX2Q3B8N5 592 aa11.61□□□□□ -0.55
PSMA3-211ENST00000557087 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
PSMA3-211ENST00000557087 PPP1R3GB7ZBB8 358 aa11.58□□□□□ -0.56
PSMA3-211ENST00000557087 PTPN5P54829 565 aa11.58□□□□□ -0.56
PSMA3-211ENST00000557087 THSD4Q6ZMP0 1018 aa11.58□□□□□ -0.56
PSMA3-211ENST00000557087 SPRYD3Q8NCJ5 442 aa11.57□□□□□ -0.56
PSMA3-211ENST00000557087 MRPL50Q8N5N7 158 aaKnown RBP11.56□□□□□ -0.56
PSMA3-211ENST00000557087 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms