RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 FAM163AQ96GL9 167 aaPredicted RBP11.5□□□□□ -0.57
ATXN3-246ENST00000557030 C2orf72A6NCS6 295 aa11.49□□□□□ -0.57
ATXN3-246ENST00000557030 GPHNQ9NQX3 736 aaPredicted RBP11.44□□□□□ -0.58
ATXN3-246ENST00000557030 CRISPLD2Q9H0B8 497 aa11.43□□□□□ -0.58
ATXN3-246ENST00000557030 POTEMA6NI47 508 aa11.41□□□□□ -0.58
ATXN3-246ENST00000557030 DOK7Q18PE1 504 aa11.41□□□□□ -0.58
ATXN3-246ENST00000557030 TMC2Q8TDI7 906 aa11.41□□□□□ -0.58
ATXN3-246ENST00000557030 NCKAP5LQ9HCH0 1330 aa11.4□□□□□ -0.58
ATXN3-246ENST00000557030 FOXK1P85037 733 aa11.4□□□□□ -0.58
ATXN3-246ENST00000557030 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
ATXN3-246ENST00000557030 SPRYD3Q8NCJ5 442 aa11.4□□□□□ -0.58
ATXN3-246ENST00000557030 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.4□□□□□ -0.58
ATXN3-246ENST00000557030 CADPS2Q86UW7 1296 aa11.38□□□□□ -0.59
ATXN3-246ENST00000557030 SLC34A2O95436 690 aa11.37□□□□□ -0.59
ATXN3-246ENST00000557030 ZSWIM6Q9HCJ5 1215 aa11.37□□□□□ -0.59
ATXN3-246ENST00000557030 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
ATXN3-246ENST00000557030 DSG2Q14126 1118 aa11.36□□□□□ -0.59
ATXN3-246ENST00000557030 GPR153Q6NV75 609 aa11.36□□□□□ -0.59
ATXN3-246ENST00000557030 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
ATXN3-246ENST00000557030 PDE4AP27815 886 aa11.32□□□□□ -0.6
ATXN3-246ENST00000557030 MFSD10Q14728 455 aa11.32□□□□□ -0.6
ATXN3-246ENST00000557030 PLPP6Q8IY26 295 aa11.32□□□□□ -0.6
ATXN3-246ENST00000557030 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
ATXN3-246ENST00000557030 ZNF710Q8N1W2 664 aa11.31□□□□□ -0.6
ATXN3-246ENST00000557030 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
ATXN3-246ENST00000557030 CFAP44Q96MT7 982 aa11.29□□□□□ -0.6
ATXN3-246ENST00000557030 PTCD2Q8WV60 388 aaKnown RBP11.28□□□□□ -0.6
ATXN3-246ENST00000557030 POTEB3A0JP26 581 aa11.27□□□□□ -0.61
ATXN3-246ENST00000557030 PPP1R15BQ5SWA1 713 aa11.27□□□□□ -0.61
ATXN3-246ENST00000557030 POTEBQ6S5H4 581 aa11.27□□□□□ -0.61
ATXN3-246ENST00000557030 KDM4FA0A1W2PPD8 638 aa11.26□□□□□ -0.61
ATXN3-246ENST00000557030 ARSIQ5FYB1 569 aa11.26□□□□□ -0.61
ATXN3-246ENST00000557030 EMP3P54852 163 aa11.25□□□□□ -0.61
ATXN3-246ENST00000557030 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
ATXN3-246ENST00000557030 PCDHGA4Q9Y5G9 962 aa11.25□□□□□ -0.61
ATXN3-246ENST00000557030 KHSRPQ92945 711 aaKnown RBP eCLIP11.24□□□□□ -0.61
ATXN3-246ENST00000557030 DDX27Q96GQ7 796 aaKnown RBP11.24□□□□□ -0.61
ATXN3-246ENST00000557030 PCDH10Q9P2E7 1040 aa11.24□□□□□ -0.61
ATXN3-246ENST00000557030 OXER1Q8TDS5 423 aa11.22□□□□□ -0.61
ATXN3-246ENST00000557030 HS3ST6Q96QI5 342 aa11.2□□□□□ -0.62
ATXN3-246ENST00000557030 FAM205CA6NFA0 338 aa11.19□□□□□ -0.62
ATXN3-246ENST00000557030 CAMK2BQ13554 666 aa11.19□□□□□ -0.62
ATXN3-246ENST00000557030 CDAN1Q8IWY9 1227 aa11.18□□□□□ -0.62
ATXN3-246ENST00000557030 NUDT7P0C024 238 aa11.17□□□□□ -0.62
ATXN3-246ENST00000557030 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
ATXN3-246ENST00000557030 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.62
ATXN3-246ENST00000557030 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
ATXN3-246ENST00000557030 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
ATXN3-246ENST00000557030 ERBB3P21860 1342 aa11.14□□□□□ -0.63
ATXN3-246ENST00000557030 TBC1D12O60347 775 aa11.12□□□□□ -0.63
ATXN3-246ENST00000557030 VARS2Q5ST30 1063 aaKnown RBP11.12□□□□□ -0.63
ATXN3-246ENST00000557030 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
ATXN3-246ENST00000557030 UPF1Q92900 1129 aaKnown RBP eCLIP11.11□□□□□ -0.63
ATXN3-246ENST00000557030 KRTAP3-3Q9BYR6 98 aa11.11□□□□□ -0.63
ATXN3-246ENST00000557030 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
ATXN3-246ENST00000557030 ANO8Q9HCE9 1232 aaPredicted RBP11.1□□□□□ -0.63
ATXN3-246ENST00000557030 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
ATXN3-246ENST00000557030 ARIH1Q9Y4X5 557 aaPredicted RBP11.05□□□□□ -0.64
ATXN3-246ENST00000557030 PSDA5PKW4 1024 aaPredicted RBP11.03□□□□□ -0.64
ATXN3-246ENST00000557030 EVI5O60447 810 aa11.03□□□□□ -0.64
ATXN3-246ENST00000557030 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
ATXN3-246ENST00000557030 MAP3K9P80192 1104 aa11.02□□□□□ -0.65
ATXN3-246ENST00000557030 E2F4Q16254 413 aa11.02□□□□□ -0.65
ATXN3-246ENST00000557030 DPYSL4O14531 572 aa10.99□□□□□ -0.65
ATXN3-246ENST00000557030 WDR70Q9NW82 654 aa10.99□□□□□ -0.65
ATXN3-246ENST00000557030 FOSBP53539 338 aa10.98□□□□□ -0.65
ATXN3-246ENST00000557030 PBX2P40425 430 aa10.95□□□□□ -0.66
ATXN3-246ENST00000557030 PTGER2P43116 358 aa10.95□□□□□ -0.66
ATXN3-246ENST00000557030 PDIA6Q15084 440 aa10.95□□□□□ -0.66
ATXN3-246ENST00000557030 JPH4Q96JJ6 628 aa10.95□□□□□ -0.66
ATXN3-246ENST00000557030 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
ATXN3-246ENST00000557030 SPNS2Q8IVW8 549 aa10.93□□□□□ -0.66
ATXN3-246ENST00000557030 ZNF454Q8N9F8 522 aa10.91□□□□□ -0.66
ATXN3-246ENST00000557030 PCDHGA10Q9Y5H3 936 aa10.91□□□□□ -0.66
ATXN3-246ENST00000557030 SPDYE16A6NNV3 312 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-246ENST00000557030 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
ATXN3-246ENST00000557030 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.66
ATXN3-246ENST00000557030 BCL2L12Q9HB09 334 aa10.9□□□□□ -0.66
ATXN3-246ENST00000557030 AXIN2Q9Y2T1 843 aa10.9□□□□□ -0.66
ATXN3-246ENST00000557030 PHF14O94880 888 aa10.89□□□□□ -0.67
ATXN3-246ENST00000557030 LSM11P83369 360 aaKnown RBP eCLIP10.89□□□□□ -0.67
ATXN3-246ENST00000557030 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
ATXN3-246ENST00000557030 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
ATXN3-246ENST00000557030 KDM2AQ9Y2K7 1162 aa10.88□□□□□ -0.67
ATXN3-246ENST00000557030 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
ATXN3-246ENST00000557030 ADAM33Q9BZ11 813 aa10.87□□□□□ -0.67
ATXN3-246ENST00000557030 PSEN2P49810 448 aa10.86□□□□□ -0.67
ATXN3-246ENST00000557030 DMRTA1Q5VZB9 504 aa10.85□□□□□ -0.67
ATXN3-246ENST00000557030 EPAS1Q99814 870 aa10.84□□□□□ -0.67
ATXN3-246ENST00000557030 PLSCR2Q9NRY7 297 aa10.84□□□□□ -0.67
ATXN3-246ENST00000557030 MMRN1Q13201 1228 aa10.83□□□□□ -0.68
ATXN3-246ENST00000557030 TYW1BQ6NUM6 668 aa10.83□□□□□ -0.68
ATXN3-246ENST00000557030 FBXW7Q969H0 707 aa10.83□□□□□ -0.68
ATXN3-246ENST00000557030 TK2O00142 265 aa10.81□□□□□ -0.68
ATXN3-246ENST00000557030 DDX12PQ92771 950 aa10.81□□□□□ -0.68
ATXN3-246ENST00000557030 ANKRD13DQ6ZTN6 518 aa10.8□□□□□ -0.68
ATXN3-246ENST00000557030 P3H3Q8IVL6 736 aa10.8□□□□□ -0.68
ATXN3-246ENST00000557030 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
ATXN3-246ENST00000557030 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
ATXN3-246ENST00000557030 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms