RNA–Protein interactions for RNA: ENST00000556996.1

CCDC175-205, Transcript of coiled-coil domain containing 175, humanhuman

TSL 4

Gene CCDC175, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-205ENST00000556996 SLAIN1Q8ND83 568 aa18.08■□□□□ 0.48
CCDC175-205ENST00000556996 TSHZ2Q9NRE2 1034 aa18■□□□□ 0.47
CCDC175-205ENST00000556996 C2orf72A6NCS6 295 aa17.98■□□□□ 0.47
CCDC175-205ENST00000556996 KIF3CO14782 793 aa17.98■□□□□ 0.47
CCDC175-205ENST00000556996 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
CCDC175-205ENST00000556996 CRISPLD2Q9H0B8 497 aa17.95■□□□□ 0.46
CCDC175-205ENST00000556996 TMC2Q8TDI7 906 aa17.92■□□□□ 0.46
CCDC175-205ENST00000556996 GPHNQ9NQX3 736 aaPredicted RBP17.89■□□□□ 0.45
CCDC175-205ENST00000556996 HAP1P54257 671 aaPredicted RBP17.86■□□□□ 0.45
CCDC175-205ENST00000556996 DSG2Q14126 1118 aa17.85■□□□□ 0.45
CCDC175-205ENST00000556996 LARP6Q9BRS8 491 aaKnown RBP17.83■□□□□ 0.44
CCDC175-205ENST00000556996 PDE4AP27815 886 aa17.82■□□□□ 0.44
CCDC175-205ENST00000556996 FOXK1P85037 733 aa17.81■□□□□ 0.44
CCDC175-205ENST00000556996 HOXB3P14651 431 aaPredicted RBP17.79■□□□□ 0.44
CCDC175-205ENST00000556996 MFSD10Q14728 455 aa17.79■□□□□ 0.44
CCDC175-205ENST00000556996 PPP1R15BQ5SWA1 713 aa17.77■□□□□ 0.44
CCDC175-205ENST00000556996 PLPP6Q8IY26 295 aa17.77■□□□□ 0.44
CCDC175-205ENST00000556996 DDX27Q96GQ7 796 aaKnown RBP17.75■□□□□ 0.43
CCDC175-205ENST00000556996 SNPHO15079 494 aa17.68■□□□□ 0.42
CCDC175-205ENST00000556996 LCE2DQ5TA82 110 aaPredicted RBP17.68■□□□□ 0.42
CCDC175-205ENST00000556996 DOK7Q18PE1 504 aa17.66■□□□□ 0.42
CCDC175-205ENST00000556996 FAM163AQ96GL9 167 aaPredicted RBP17.65■□□□□ 0.42
CCDC175-205ENST00000556996 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
CCDC175-205ENST00000556996 ST18O60284 1047 aa17.62■□□□□ 0.41
CCDC175-205ENST00000556996 SLC34A2O95436 690 aa17.59■□□□□ 0.41
CCDC175-205ENST00000556996 ZNF710Q8N1W2 664 aa17.58■□□□□ 0.4
CCDC175-205ENST00000556996 EMILIN3Q9NT22 766 aa17.58■□□□□ 0.4
CCDC175-205ENST00000556996 WDR70Q9NW82 654 aa17.58■□□□□ 0.4
CCDC175-205ENST00000556996 CAMK2BQ13554 666 aa17.57■□□□□ 0.4
CCDC175-205ENST00000556996 UPF1Q92900 1129 aaKnown RBP eCLIP17.57■□□□□ 0.4
CCDC175-205ENST00000556996 KHSRPQ92945 711 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCDC175-205ENST00000556996 GPR153Q6NV75 609 aa17.54■□□□□ 0.4
CCDC175-205ENST00000556996 PTCD2Q8WV60 388 aaKnown RBP17.54■□□□□ 0.4
CCDC175-205ENST00000556996 PCDHGA4Q9Y5G9 962 aa17.54■□□□□ 0.4
CCDC175-205ENST00000556996 RIMBP2O15034 1052 aa17.53■□□□□ 0.4
CCDC175-205ENST00000556996 ARSIQ5FYB1 569 aa17.53■□□□□ 0.4
CCDC175-205ENST00000556996 OXER1Q8TDS5 423 aa17.53■□□□□ 0.4
CCDC175-205ENST00000556996 ZSWIM6Q9HCJ5 1215 aa17.51■□□□□ 0.39
CCDC175-205ENST00000556996 E2F4Q16254 413 aa17.5■□□□□ 0.39
CCDC175-205ENST00000556996 VSIG10Q8N0Z9 540 aa17.5■□□□□ 0.39
CCDC175-205ENST00000556996 HOXB1P14653 301 aaPredicted RBP17.49■□□□□ 0.39
CCDC175-205ENST00000556996 MARVELD3Q96A59 401 aa17.48■□□□□ 0.39
CCDC175-205ENST00000556996 KCNV2Q8TDN2 545 aa17.45■□□□□ 0.38
CCDC175-205ENST00000556996 NUDT7P0C024 238 aa17.44■□□□□ 0.38
CCDC175-205ENST00000556996 DPYSL4O14531 572 aa17.43■□□□□ 0.38
CCDC175-205ENST00000556996 KDM4FA0A1W2PPD8 638 aa17.41■□□□□ 0.38
CCDC175-205ENST00000556996 SLC24A1O60721 1099 aa17.4■□□□□ 0.38
CCDC175-205ENST00000556996 EMP3P54852 163 aa17.38■□□□□ 0.37
CCDC175-205ENST00000556996 TBC1D12O60347 775 aa17.37■□□□□ 0.37
CCDC175-205ENST00000556996 MAP3K9P80192 1104 aa17.37■□□□□ 0.37
CCDC175-205ENST00000556996 EVI5O60447 810 aa17.33■□□□□ 0.36
CCDC175-205ENST00000556996 ARIH1Q9Y4X5 557 aaPredicted RBP17.33■□□□□ 0.36
CCDC175-205ENST00000556996 POTEB3A0JP26 581 aa17.31■□□□□ 0.36
CCDC175-205ENST00000556996 POTEBQ6S5H4 581 aa17.31■□□□□ 0.36
CCDC175-205ENST00000556996 POTEMA6NI47 508 aa17.3■□□□□ 0.36
CCDC175-205ENST00000556996 POTEGQ6S5H5 508 aa17.3■□□□□ 0.36
CCDC175-205ENST00000556996 LHX6Q9UPM6 363 aa17.3■□□□□ 0.36
CCDC175-205ENST00000556996 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
CCDC175-205ENST00000556996 FAM205CA6NFA0 338 aa17.28■□□□□ 0.36
CCDC175-205ENST00000556996 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
CCDC175-205ENST00000556996 PDIA6Q15084 440 aa17.27■□□□□ 0.36
CCDC175-205ENST00000556996 ARHGEF1Q92888 912 aaKnown RBP17.27■□□□□ 0.36
CCDC175-205ENST00000556996 ERBB3P21860 1342 aa17.26■□□□□ 0.35
CCDC175-205ENST00000556996 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
CCDC175-205ENST00000556996 VARS2Q5ST30 1063 aaKnown RBP17.24■□□□□ 0.35
CCDC175-205ENST00000556996 HS3ST6Q96QI5 342 aa17.24■□□□□ 0.35
CCDC175-205ENST00000556996 SPDYE16A6NNV3 312 aaPredicted RBP17.18■□□□□ 0.34
CCDC175-205ENST00000556996 DDX12PQ92771 950 aa17.14■□□□□ 0.33
CCDC175-205ENST00000556996 FOSBP53539 338 aa17.13■□□□□ 0.33
CCDC175-205ENST00000556996 ZNF454Q8N9F8 522 aa17.13■□□□□ 0.33
CCDC175-205ENST00000556996 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
CCDC175-205ENST00000556996 PTGER2P43116 358 aa17.11■□□□□ 0.33
CCDC175-205ENST00000556996 PCDHGA10Q9Y5H3 936 aa17.1■□□□□ 0.33
CCDC175-205ENST00000556996 SEMA3EO15041 775 aa17.09■□□□□ 0.33
CCDC175-205ENST00000556996 MLLT3P42568 568 aaPredicted RBP17.08■□□□□ 0.32
CCDC175-205ENST00000556996 PSDA5PKW4 1024 aaPredicted RBP17.07■□□□□ 0.32
CCDC175-205ENST00000556996 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
CCDC175-205ENST00000556996 GRXCR2A6NFK2 248 aa17.05■□□□□ 0.32
CCDC175-205ENST00000556996 PHF14O94880 888 aa17.05■□□□□ 0.32
CCDC175-205ENST00000556996 POTEEQ6S8J3 1075 aa17.05■□□□□ 0.32
CCDC175-205ENST00000556996 ZNF687Q8N1G0 1237 aa17.05■□□□□ 0.32
CCDC175-205ENST00000556996 CDAN1Q8IWY9 1227 aa17.04■□□□□ 0.32
CCDC175-205ENST00000556996 PRIM1P49642 420 aaKnown RBP17.03■□□□□ 0.32
CCDC175-205ENST00000556996 NBR1Q14596 966 aa17.02■□□□□ 0.32
CCDC175-205ENST00000556996 ADAM33Q9BZ11 813 aa17.02■□□□□ 0.32
CCDC175-205ENST00000556996 ZDHHC16Q969W1 377 aa17.01■□□□□ 0.31
CCDC175-205ENST00000556996 TYW1BQ6NUM6 668 aa16.99■□□□□ 0.31
CCDC175-205ENST00000556996 KRTAP3-3Q9BYR6 98 aa16.99■□□□□ 0.31
CCDC175-205ENST00000556996 KRTAP3-2Q9BYR7 98 aa16.99■□□□□ 0.31
CCDC175-205ENST00000556996 AXIN2Q9Y2T1 843 aa16.99■□□□□ 0.31
CCDC175-205ENST00000556996 TESPA1A2RU30 521 aaPredicted RBP16.98■□□□□ 0.31
CCDC175-205ENST00000556996 OSBPP22059 807 aa16.97■□□□□ 0.31
CCDC175-205ENST00000556996 EPAS1Q99814 870 aa16.97■□□□□ 0.31
CCDC175-205ENST00000556996 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.31
CCDC175-205ENST00000556996 BCL2L12Q9HB09 334 aa16.96■□□□□ 0.31
CCDC175-205ENST00000556996 FBXW7Q969H0 707 aa16.94■□□□□ 0.3
CCDC175-205ENST00000556996 PSEN2P49810 448 aa16.93■□□□□ 0.3
CCDC175-205ENST00000556996 EN1Q05925 392 aaPredicted RBP16.93■□□□□ 0.3
CCDC175-205ENST00000556996 KCNK17Q96T54 332 aa16.93■□□□□ 0.3
CCDC175-205ENST00000556996 TSR1Q2NL82 804 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms