RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 MTUS2Q5JR59 1369 aa28.65■■■□□ 2.18
XRCC3-217ENST00000556980 POGZQ7Z3K3 1410 aa28.65■■■□□ 2.18
XRCC3-217ENST00000556980 ZMYM4Q5VZL5 1548 aa28.62■■■□□ 2.17
XRCC3-217ENST00000556980 PREX2Q70Z35 1606 aa28.61■■■□□ 2.17
XRCC3-217ENST00000556980 ARHGEF40Q8TER5 1519 aa28.61■■■□□ 2.17
XRCC3-217ENST00000556980 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
XRCC3-217ENST00000556980 MAGI2Q86UL8 1455 aa28.57■■■□□ 2.16
XRCC3-217ENST00000556980 ZFYVE16Q7Z3T8 1539 aa28.57■■■□□ 2.16
XRCC3-217ENST00000556980 CDC42BPBQ9Y5S2 1711 aa28.57■■■□□ 2.16
XRCC3-217ENST00000556980 EHBP1L1Q8N3D4 1523 aa28.56■■■□□ 2.16
XRCC3-217ENST00000556980 ZNF518AQ6AHZ1 1483 aa28.54■■■□□ 2.16
XRCC3-217ENST00000556980 ARID4BQ4LE39 1312 aaPredicted RBP28.54■■■□□ 2.16
XRCC3-217ENST00000556980 YEATS2Q9ULM3 1422 aa28.53■■■□□ 2.16
XRCC3-217ENST00000556980 CCNB3Q8WWL7 1395 aa28.53■■■□□ 2.16
XRCC3-217ENST00000556980 GPATCH8Q9UKJ3 1502 aaKnown RBP28.53■■■□□ 2.16
XRCC3-217ENST00000556980 CDC42BPAQ5VT25 1732 aa28.52■■■□□ 2.16
XRCC3-217ENST00000556980 ABCC1P33527 1531 aa28.51■■■□□ 2.15
XRCC3-217ENST00000556980 AFAP1Q8N556 730 aa28.49■■■□□ 2.15
XRCC3-217ENST00000556980 ZNF777Q9ULD5 760 aaPredicted RBP28.49■■■□□ 2.15
XRCC3-217ENST00000556980 TIAM1Q13009 1591 aa28.47■■■□□ 2.15
XRCC3-217ENST00000556980 CFDP1Q9UEE9 299 aaPredicted RBP28.47■■■□□ 2.15
XRCC3-217ENST00000556980 KDM5CP41229 1560 aa28.46■■■□□ 2.15
XRCC3-217ENST00000556980 ARHGEF12Q9NZN5 1544 aa28.45■■■□□ 2.15
XRCC3-217ENST00000556980 MYT1LQ9UL68 1186 aa28.45■■■□□ 2.14
XRCC3-217ENST00000556980 TRAPPC8Q9Y2L5 1435 aa28.43■■■□□ 2.14
XRCC3-217ENST00000556980 SAMD9LQ8IVG5 1584 aa28.42■■■□□ 2.14
XRCC3-217ENST00000556980 ITSN2Q9NZM3 1697 aa28.42■■■□□ 2.14
XRCC3-217ENST00000556980 ATP10AO60312 1499 aa28.41■■■□□ 2.14
XRCC3-217ENST00000556980 HECW2Q9P2P5 1572 aa28.4■■■□□ 2.14
XRCC3-217ENST00000556980 PLEKHH2Q8IVE3 1493 aa28.4■■■□□ 2.14
XRCC3-217ENST00000556980 BCORL1Q5H9F3 1711 aa28.39■■■□□ 2.14
XRCC3-217ENST00000556980 C9orf84Q5VXU9 1444 aa28.39■■■□□ 2.14
XRCC3-217ENST00000556980 ADAMTSL3P82987 1691 aa28.38■■■□□ 2.13
XRCC3-217ENST00000556980 SYCP2Q9BX26 1530 aa28.38■■■□□ 2.13
XRCC3-217ENST00000556980 NCOA2Q15596 1464 aa28.38■■■□□ 2.13
XRCC3-217ENST00000556980 MLH3Q9UHC1 1453 aa28.38■■■□□ 2.13
XRCC3-217ENST00000556980 SUPT6HQ7KZ85 1726 aaKnown RBP28.37■■■□□ 2.13
XRCC3-217ENST00000556980 LRRC9Q6ZRR7 1453 aa28.36■■■□□ 2.13
XRCC3-217ENST00000556980 KIAA1107Q9UPP5 1409 aa28.35■■■□□ 2.13
XRCC3-217ENST00000556980 MAP3K1Q13233 1512 aa28.35■■■□□ 2.13
XRCC3-217ENST00000556980 HNRNPMP52272 730 aaKnown RBP eCLIP28.34■■■□□ 2.13
XRCC3-217ENST00000556980 SIGLEC1Q9BZZ2 1709 aa28.32■■■□□ 2.12
XRCC3-217ENST00000556980 DIP2CQ9Y2E4 1556 aa28.32■■■□□ 2.12
XRCC3-217ENST00000556980 PTPRMP28827 1452 aa28.31■■■□□ 2.12
XRCC3-217ENST00000556980 MADDQ8WXG6 1647 aa28.31■■■□□ 2.12
XRCC3-217ENST00000556980 APLP2Q06481 763 aa28.3■■■□□ 2.12
XRCC3-217ENST00000556980 MLECQ14165 292 aa28.3■■■□□ 2.12
XRCC3-217ENST00000556980 ABCA6Q8N139 1617 aa28.29■■■□□ 2.12
XRCC3-217ENST00000556980 ZNF644Q9H582 1327 aaPredicted RBP28.29■■■□□ 2.12
XRCC3-217ENST00000556980 SPAG9O60271 1321 aaKnown RBP28.28■■■□□ 2.12
XRCC3-217ENST00000556980 KANK4Q5T7N3 995 aaPredicted RBP28.28■■■□□ 2.12
XRCC3-217ENST00000556980 REREQ9P2R6 1566 aa28.24■■■□□ 2.11
XRCC3-217ENST00000556980 KIDINS220Q9ULH0 1771 aa28.23■■■□□ 2.11
XRCC3-217ENST00000556980 RIMS1Q86UR5 1692 aaKnown RBP28.21■■■□□ 2.11
XRCC3-217ENST00000556980 CAMSAP2Q08AD1 1489 aa28.21■■■□□ 2.11
XRCC3-217ENST00000556980 ATP7AQ04656 1500 aa28.2■■■□□ 2.1
XRCC3-217ENST00000556980 MBD5Q9P267 1494 aa28.2■■■□□ 2.1
XRCC3-217ENST00000556980 INO80Q9ULG1 1556 aaPredicted RBP28.18■■■□□ 2.1
XRCC3-217ENST00000556980 AGLP35573 1532 aa28.17■■■□□ 2.1
XRCC3-217ENST00000556980 FER1L4A9Z1Z3 1794 aa28.14■■■□□ 2.1
XRCC3-217ENST00000556980 CCDC141Q6ZP82 1450 aa28.14■■■□□ 2.09
XRCC3-217ENST00000556980 MYOM3Q5VTT5 1437 aa28.13■■■□□ 2.09
XRCC3-217ENST00000556980 PLPPR3Q6T4P5 718 aa28.13■■■□□ 2.09
XRCC3-217ENST00000556980 RSPH4AQ5TD94 716 aa28.11■■■□□ 2.09
XRCC3-217ENST00000556980 MIA2Q96PC5 1412 aa28.09■■■□□ 2.09
XRCC3-217ENST00000556980 A2MP01023 1474 aa28.09■■■□□ 2.09
XRCC3-217ENST00000556980 RTEL1-TNFRSF6BF6WH68 1400 aa28.09■■■□□ 2.09
XRCC3-217ENST00000556980 ESF1Q9H501 851 aaKnown RBP28.06■■■□□ 2.08
XRCC3-217ENST00000556980 ARHGEF5Q12774 1597 aa28.06■■■□□ 2.08
XRCC3-217ENST00000556980 PLXNC1O60486 1568 aa28.04■■■□□ 2.08
XRCC3-217ENST00000556980 TSPY4P0CV99 314 aa28.02■■■□□ 2.08
XRCC3-217ENST00000556980 TSPY10P0CW01 314 aa28.02■■■□□ 2.08
XRCC3-217ENST00000556980 ADGBQ8N7X0 1667 aa28.01■■■□□ 2.07
XRCC3-217ENST00000556980 CEBPAP49715 358 aaPredicted RBP27.98■■■□□ 2.07
XRCC3-217ENST00000556980 CNTLNQ9NXG0 1405 aa27.97■■■□□ 2.07
XRCC3-217ENST00000556980 LMTK3Q96Q04 1460 aa27.96■■■□□ 2.07
XRCC3-217ENST00000556980 DHX29Q7Z478 1369 aaKnown RBP27.96■■■□□ 2.07
XRCC3-217ENST00000556980 FGD6Q6ZV73 1430 aa27.94■■■□□ 2.06
XRCC3-217ENST00000556980 GGT6Q6P531 493 aa27.93■■■□□ 2.06
XRCC3-217ENST00000556980 PTPN23Q9H3S7 1636 aa27.92■■■□□ 2.06
XRCC3-217ENST00000556980 MAST1Q9Y2H9 1570 aa27.9■■■□□ 2.06
XRCC3-217ENST00000556980 KIF3BO15066 747 aa27.87■■■□□ 2.05
XRCC3-217ENST00000556980 TCOF1Q13428 1488 aaKnown RBP27.87■■■□□ 2.05
XRCC3-217ENST00000556980 C3P01024 1663 aa27.87■■■□□ 2.05
XRCC3-217ENST00000556980 PPP6R1Q9UPN7 881 aa27.85■■■□□ 2.05
XRCC3-217ENST00000556980 ZMYM3Q14202 1370 aa27.84■■■□□ 2.05
XRCC3-217ENST00000556980 ABCC5O15440 1437 aa27.84■■■□□ 2.05
XRCC3-217ENST00000556980 HSPA2P54652 639 aa27.83■■■□□ 2.05
XRCC3-217ENST00000556980 MROH2AA6NES4 1674 aa27.83■■■□□ 2.05
XRCC3-217ENST00000556980 SHANK2Q9UPX8 1470 aa27.83■■■□□ 2.04
XRCC3-217ENST00000556980 PREX1Q8TCU6 1659 aa27.82■■■□□ 2.04
XRCC3-217ENST00000556980 UHRF1BP1Q6BDS2 1440 aa27.82■■■□□ 2.04
XRCC3-217ENST00000556980 DAPK1P53355 1430 aa27.81■■■□□ 2.04
XRCC3-217ENST00000556980 CLTCQ00610 1675 aaKnown RBP27.81■■■□□ 2.04
XRCC3-217ENST00000556980 DNMT1P26358 1616 aaKnown RBP27.79■■■□□ 2.04
XRCC3-217ENST00000556980 CROCC2H7BZ55 1655 aa27.78■■■□□ 2.04
XRCC3-217ENST00000556980 NPATQ14207 1427 aa27.77■■■□□ 2.04
XRCC3-217ENST00000556980 FAM50AQ14320 339 aaKnown RBP27.77■■■□□ 2.04
XRCC3-217ENST00000556980 KIF15Q9NS87 1388 aa27.75■■■□□ 2.03
XRCC3-217ENST00000556980 DUOX2Q9NRD8 1548 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms