RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 POTEJP0CG39 1038 aa14.71□□□□□ -0.05
LINC00871-204ENST00000556886 POTEMA6NI47 508 aa14.7□□□□□ -0.06
LINC00871-204ENST00000556886 NCKAP5LQ9HCH0 1330 aa14.68□□□□□ -0.06
LINC00871-204ENST00000556886 C3orf67Q6ZVT6 689 aa14.66□□□□□ -0.06
LINC00871-204ENST00000556886 CRISPLD2Q9H0B8 497 aa14.66□□□□□ -0.06
LINC00871-204ENST00000556886 POTEGQ6S5H5 508 aa14.64□□□□□ -0.07
LINC00871-204ENST00000556886 TMEM92Q6UXU6 159 aa14.64□□□□□ -0.07
LINC00871-204ENST00000556886 PDE4AP27815 886 aa14.62□□□□□ -0.07
LINC00871-204ENST00000556886 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
LINC00871-204ENST00000556886 MAMSTRQ6ZN01 415 aa14.61□□□□□ -0.07
LINC00871-204ENST00000556886 PCDH10Q9P2E7 1040 aa14.6□□□□□ -0.07
LINC00871-204ENST00000556886 TMC2Q8TDI7 906 aa14.59□□□□□ -0.07
LINC00871-204ENST00000556886 GPHNQ9NQX3 736 aaPredicted RBP14.59□□□□□ -0.07
LINC00871-204ENST00000556886 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.59□□□□□ -0.07
LINC00871-204ENST00000556886 C2orf72A6NCS6 295 aa14.58□□□□□ -0.08
LINC00871-204ENST00000556886 KIF3CO14782 793 aa14.57□□□□□ -0.08
LINC00871-204ENST00000556886 MFSD10Q14728 455 aa14.56□□□□□ -0.08
LINC00871-204ENST00000556886 WDR70Q9NW82 654 aa14.56□□□□□ -0.08
LINC00871-204ENST00000556886 DDX27Q96GQ7 796 aaKnown RBP14.55□□□□□ -0.08
LINC00871-204ENST00000556886 SCUBE2Q9NQ36 999 aa14.53□□□□□ -0.08
LINC00871-204ENST00000556886 DSG2Q14126 1118 aa14.52□□□□□ -0.09
LINC00871-204ENST00000556886 PPP1R15BQ5SWA1 713 aa14.51□□□□□ -0.09
LINC00871-204ENST00000556886 FOXK1P85037 733 aa14.5□□□□□ -0.09
LINC00871-204ENST00000556886 SLAIN1Q8ND83 568 aa14.47□□□□□ -0.09
LINC00871-204ENST00000556886 PLPP6Q8IY26 295 aa14.46□□□□□ -0.09
LINC00871-204ENST00000556886 E2F4Q16254 413 aa14.43□□□□□ -0.1
LINC00871-204ENST00000556886 KCNV2Q8TDN2 545 aa14.42□□□□□ -0.1
LINC00871-204ENST00000556886 CAMK2BQ13554 666 aa14.39□□□□□ -0.11
LINC00871-204ENST00000556886 P3H3Q8IVL6 736 aa14.38□□□□□ -0.11
LINC00871-204ENST00000556886 FAM163AQ96GL9 167 aaPredicted RBP14.36□□□□□ -0.11
LINC00871-204ENST00000556886 EMILIN3Q9NT22 766 aa14.35□□□□□ -0.11
LINC00871-204ENST00000556886 UPF1Q92900 1129 aaKnown RBP eCLIP14.3□□□□□ -0.12
LINC00871-204ENST00000556886 HOXB3P14651 431 aaPredicted RBP14.28□□□□□ -0.12
LINC00871-204ENST00000556886 ARHGEF1Q92888 912 aaKnown RBP14.28□□□□□ -0.12
LINC00871-204ENST00000556886 DPYSL4O14531 572 aa14.26□□□□□ -0.13
LINC00871-204ENST00000556886 SLC34A2O95436 690 aa14.26□□□□□ -0.13
LINC00871-204ENST00000556886 OXER1Q8TDS5 423 aa14.26□□□□□ -0.13
LINC00871-204ENST00000556886 ARIH1Q9Y4X5 557 aaPredicted RBP14.26□□□□□ -0.13
LINC00871-204ENST00000556886 DOK7Q18PE1 504 aa14.24□□□□□ -0.13
LINC00871-204ENST00000556886 PTCD2Q8WV60 388 aaKnown RBP14.24□□□□□ -0.13
LINC00871-204ENST00000556886 SNPHO15079 494 aa14.2□□□□□ -0.14
LINC00871-204ENST00000556886 MAP3K9P80192 1104 aa14.2□□□□□ -0.14
LINC00871-204ENST00000556886 LCE2DQ5TA82 110 aaPredicted RBP14.2□□□□□ -0.14
LINC00871-204ENST00000556886 NBR1Q14596 966 aa14.19□□□□□ -0.14
LINC00871-204ENST00000556886 PCDHGA4Q9Y5G9 962 aa14.19□□□□□ -0.14
LINC00871-204ENST00000556886 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
LINC00871-204ENST00000556886 BCANQ96GW7 911 aa14.17□□□□□ -0.14
LINC00871-204ENST00000556886 ZNF710Q8N1W2 664 aa14.16□□□□□ -0.14
LINC00871-204ENST00000556886 TBC1D12O60347 775 aa14.15□□□□□ -0.14
LINC00871-204ENST00000556886 PDIA6Q15084 440 aa14.15□□□□□ -0.14
LINC00871-204ENST00000556886 ARSIQ5FYB1 569 aa14.13□□□□□ -0.15
LINC00871-204ENST00000556886 KHSRPQ92945 711 aaKnown RBP eCLIP14.13□□□□□ -0.15
LINC00871-204ENST00000556886 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
LINC00871-204ENST00000556886 SEMA3EO15041 775 aa14.12□□□□□ -0.15
LINC00871-204ENST00000556886 GPR153Q6NV75 609 aa14.12□□□□□ -0.15
LINC00871-204ENST00000556886 SPDYE16A6NNV3 312 aaPredicted RBP14.11□□□□□ -0.15
LINC00871-204ENST00000556886 EVI5O60447 810 aa14.11□□□□□ -0.15
LINC00871-204ENST00000556886 NUDT7P0C024 238 aa14.08□□□□□ -0.16
LINC00871-204ENST00000556886 KDM4FA0A1W2PPD8 638 aa14.07□□□□□ -0.16
LINC00871-204ENST00000556886 CDAN1Q8IWY9 1227 aa14.06□□□□□ -0.16
LINC00871-204ENST00000556886 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
LINC00871-204ENST00000556886 HOXB1P14653 301 aaPredicted RBP14.05□□□□□ -0.16
LINC00871-204ENST00000556886 TESPA1A2RU30 521 aaPredicted RBP14.04□□□□□ -0.16
LINC00871-204ENST00000556886 ANO8Q9HCE9 1232 aaPredicted RBP14.04□□□□□ -0.16
LINC00871-204ENST00000556886 ST18O60284 1047 aa14.03□□□□□ -0.16
LINC00871-204ENST00000556886 MLLT3P42568 568 aaPredicted RBP14.03□□□□□ -0.16
LINC00871-204ENST00000556886 DDX12PQ92771 950 aa14□□□□□ -0.17
LINC00871-204ENST00000556886 PTGER2P43116 358 aa13.99□□□□□ -0.17
LINC00871-204ENST00000556886 GRXCR2A6NFK2 248 aa13.98□□□□□ -0.17
LINC00871-204ENST00000556886 LHX6Q9UPM6 363 aa13.97□□□□□ -0.17
LINC00871-204ENST00000556886 MARVELD3Q96A59 401 aa13.93□□□□□ -0.18
LINC00871-204ENST00000556886 SMYD5Q6GMV2 418 aa13.92□□□□□ -0.18
LINC00871-204ENST00000556886 JPH4Q96JJ6 628 aa13.91□□□□□ -0.18
LINC00871-204ENST00000556886 PCDHGA10Q9Y5H3 936 aa13.91□□□□□ -0.18
LINC00871-204ENST00000556886 PHF14O94880 888 aa13.9□□□□□ -0.18
LINC00871-204ENST00000556886 FOSBP53539 338 aa13.9□□□□□ -0.18
LINC00871-204ENST00000556886 ZNF454Q8N9F8 522 aa13.9□□□□□ -0.18
LINC00871-204ENST00000556886 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
LINC00871-204ENST00000556886 OSBPP22059 807 aa13.89□□□□□ -0.19
LINC00871-204ENST00000556886 EMP3P54852 163 aa13.89□□□□□ -0.19
LINC00871-204ENST00000556886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC00871-204ENST00000556886 PRIM1P49642 420 aaKnown RBP13.88□□□□□ -0.19
LINC00871-204ENST00000556886 LMOD2Q6P5Q4 547 aa13.87□□□□□ -0.19
LINC00871-204ENST00000556886 RBM26Q5T8P6 1007 aaKnown RBP13.86□□□□□ -0.19
LINC00871-204ENST00000556886 EPAS1Q99814 870 aa13.86□□□□□ -0.19
LINC00871-204ENST00000556886 ERBB3P21860 1342 aa13.86□□□□□ -0.19
LINC00871-204ENST00000556886 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
LINC00871-204ENST00000556886 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
LINC00871-204ENST00000556886 PPP4R3BQ5MIZ7 849 aa13.83□□□□□ -0.2
LINC00871-204ENST00000556886 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
LINC00871-204ENST00000556886 ZDHHC16Q969W1 377 aa13.83□□□□□ -0.2
LINC00871-204ENST00000556886 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
LINC00871-204ENST00000556886 FAM205CA6NFA0 338 aa13.82□□□□□ -0.2
LINC00871-204ENST00000556886 EN1Q05925 392 aaPredicted RBP13.82□□□□□ -0.2
LINC00871-204ENST00000556886 FBXW7Q969H0 707 aa13.81□□□□□ -0.2
LINC00871-204ENST00000556886 ADAM33Q9BZ11 813 aa13.8□□□□□ -0.2
LINC00871-204ENST00000556886 MAP3K7O43318 606 aa13.79□□□□□ -0.2
LINC00871-204ENST00000556886 POTEB3A0JP26 581 aa13.77□□□□□ -0.21
LINC00871-204ENST00000556886 POTEBQ6S5H4 581 aa13.77□□□□□ -0.21
LINC00871-204ENST00000556886 HS3ST6Q96QI5 342 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms