RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 ANKRD13DQ6ZTN6 518 aa11.57□□□□□ -0.56
CPSF2-205ENST00000556622 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
CPSF2-205ENST00000556622 MS4A4AQ96JQ5 239 aa11.56□□□□□ -0.56
CPSF2-205ENST00000556622 PTGER2P43116 358 aa11.53□□□□□ -0.56
CPSF2-205ENST00000556622 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
CPSF2-205ENST00000556622 ZNF316A6NFI3 1004 aaPredicted RBP11.49□□□□□ -0.57
CPSF2-205ENST00000556622 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
CPSF2-205ENST00000556622 PKD2Q13563 968 aa11.49□□□□□ -0.57
CPSF2-205ENST00000556622 PHF8Q9UPP1 1060 aa11.49□□□□□ -0.57
CPSF2-205ENST00000556622 SOX12O15370 315 aa11.45□□□□□ -0.58
CPSF2-205ENST00000556622 RNF25Q96BH1 459 aaPredicted RBP11.43□□□□□ -0.58
CPSF2-205ENST00000556622 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.42□□□□□ -0.58
CPSF2-205ENST00000556622 POTEEQ6S8J3 1075 aa11.42□□□□□ -0.58
CPSF2-205ENST00000556622 ZFP91Q96JP5 570 aaPredicted RBP11.42□□□□□ -0.58
CPSF2-205ENST00000556622 AXIN2Q9Y2T1 843 aa11.4□□□□□ -0.58
CPSF2-205ENST00000556622 PLA2G2EQ9NZK7 142 aa11.38□□□□□ -0.59
CPSF2-205ENST00000556622 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
CPSF2-205ENST00000556622 NUDT7P0C024 238 aa11.37□□□□□ -0.59
CPSF2-205ENST00000556622 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
CPSF2-205ENST00000556622 ECM2O94769 699 aaPredicted RBP11.34□□□□□ -0.59
CPSF2-205ENST00000556622 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
CPSF2-205ENST00000556622 PBX2P40425 430 aa11.32□□□□□ -0.6
CPSF2-205ENST00000556622 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
CPSF2-205ENST00000556622 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
CPSF2-205ENST00000556622 KIF3CO14782 793 aa11.3□□□□□ -0.6
CPSF2-205ENST00000556622 VGFO15240 615 aaPredicted RBP11.3□□□□□ -0.6
CPSF2-205ENST00000556622 DCAF8L2P0C7V8 631 aa11.28□□□□□ -0.6
CPSF2-205ENST00000556622 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
CPSF2-205ENST00000556622 HCSTQ9UBK5 93 aa11.28□□□□□ -0.6
CPSF2-205ENST00000556622 RGL2O15211 777 aa11.27□□□□□ -0.61
CPSF2-205ENST00000556622 NLRP6P59044 892 aa11.27□□□□□ -0.61
CPSF2-205ENST00000556622 PCDHGA4Q9Y5G9 962 aa11.26□□□□□ -0.61
CPSF2-205ENST00000556622 ADGRD1Q6QNK2 874 aa11.24□□□□□ -0.61
CPSF2-205ENST00000556622 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
CPSF2-205ENST00000556622 TAOK2Q9UL54 1235 aa11.23□□□□□ -0.61
CPSF2-205ENST00000556622 BCL11BQ9C0K0 894 aaPredicted RBP11.22□□□□□ -0.61
CPSF2-205ENST00000556622 ARHGAP33O14559 1287 aa11.18□□□□□ -0.62
CPSF2-205ENST00000556622 SLC34A2O95436 690 aa11.18□□□□□ -0.62
CPSF2-205ENST00000556622 DMRTA1Q5VZB9 504 aa11.17□□□□□ -0.62
CPSF2-205ENST00000556622 STK24Q9Y6E0 443 aa11.16□□□□□ -0.62
CPSF2-205ENST00000556622 HRO43593 1189 aa11.15□□□□□ -0.62
CPSF2-205ENST00000556622 PSEN2P49810 448 aa11.15□□□□□ -0.62
CPSF2-205ENST00000556622 KCTD12Q96CX2 325 aaKnown RBP11.12□□□□□ -0.63
CPSF2-205ENST00000556622 KDM4FA0A1W2PPD8 638 aa11.11□□□□□ -0.63
CPSF2-205ENST00000556622 DNAJC5Q9H3Z4 198 aa11.11□□□□□ -0.63
CPSF2-205ENST00000556622 TMC2Q8TDI7 906 aa11.1□□□□□ -0.63
CPSF2-205ENST00000556622 TK2O00142 265 aa11.09□□□□□ -0.63
CPSF2-205ENST00000556622 HS6ST3Q8IZP7 471 aa11.08□□□□□ -0.64
CPSF2-205ENST00000556622 RB1CC1Q8TDY2 1594 aa11.07□□□□□ -0.64
CPSF2-205ENST00000556622 STK25O00506 426 aa11.06□□□□□ -0.64
CPSF2-205ENST00000556622 PSDA5PKW4 1024 aaPredicted RBP11.05□□□□□ -0.64
CPSF2-205ENST00000556622 NACADO15069 1562 aa11.05□□□□□ -0.64
CPSF2-205ENST00000556622 PPP1R37O75864 691 aa11.03□□□□□ -0.64
CPSF2-205ENST00000556622 CHGAP10645 457 aaKnown RBP11□□□□□ -0.65
CPSF2-205ENST00000556622 PTPN5P54829 565 aa11□□□□□ -0.65
CPSF2-205ENST00000556622 PTCD2Q8WV60 388 aaKnown RBP11□□□□□ -0.65
CPSF2-205ENST00000556622 KCNK17Q96T54 332 aa10.98□□□□□ -0.65
CPSF2-205ENST00000556622 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
CPSF2-205ENST00000556622 STAC3Q96MF2 364 aa10.96□□□□□ -0.65
CPSF2-205ENST00000556622 IRX2Q9BZI1 471 aaPredicted RBP10.94□□□□□ -0.66
CPSF2-205ENST00000556622 VPS9D1Q9Y2B5 631 aa10.94□□□□□ -0.66
CPSF2-205ENST00000556622 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
CPSF2-205ENST00000556622 PLPP6Q8IY26 295 aa10.93□□□□□ -0.66
CPSF2-205ENST00000556622 MYO15BQ96JP2 1530 aa10.92□□□□□ -0.66
CPSF2-205ENST00000556622 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
CPSF2-205ENST00000556622 FOXK1P85037 733 aa10.9□□□□□ -0.66
CPSF2-205ENST00000556622 A0A0G2JS52 829 aa10.89□□□□□ -0.67
CPSF2-205ENST00000556622 RGS20O76081 388 aa10.89□□□□□ -0.67
CPSF2-205ENST00000556622 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
CPSF2-205ENST00000556622 BBXQ8WY36 941 aaPredicted RBP10.89□□□□□ -0.67
CPSF2-205ENST00000556622 DSG2Q14126 1118 aa10.88□□□□□ -0.67
CPSF2-205ENST00000556622 THSD4Q6ZMP0 1018 aa10.87□□□□□ -0.67
CPSF2-205ENST00000556622 DCAF1Q9Y4B6 1507 aa10.87□□□□□ -0.67
CPSF2-205ENST00000556622 KCNH8Q96L42 1107 aa10.84□□□□□ -0.67
CPSF2-205ENST00000556622 GPHNQ9NQX3 736 aaPredicted RBP10.84□□□□□ -0.67
CPSF2-205ENST00000556622 RYDENQ9NUL5 291 aaKnown RBP10.84□□□□□ -0.67
CPSF2-205ENST00000556622 BHMG1C9JSJ3 638 aaPredicted RBP10.83□□□□□ -0.68
CPSF2-205ENST00000556622 GTPBP6O43824 516 aaPredicted RBP10.82□□□□□ -0.68
CPSF2-205ENST00000556622 TBC1D12O60347 775 aa10.82□□□□□ -0.68
CPSF2-205ENST00000556622 ZNF454Q8N9F8 522 aa10.82□□□□□ -0.68
CPSF2-205ENST00000556622 BCL2L12Q9HB09 334 aa10.8□□□□□ -0.68
CPSF2-205ENST00000556622 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.68
CPSF2-205ENST00000556622 WNT2BQ93097 391 aa10.79□□□□□ -0.68
CPSF2-205ENST00000556622 SLC4A5Q9BY07 1137 aa10.79□□□□□ -0.68
CPSF2-205ENST00000556622 OXER1Q8TDS5 423 aa10.78□□□□□ -0.68
CPSF2-205ENST00000556622 ZBED2Q9BTP6 218 aa10.78□□□□□ -0.68
CPSF2-205ENST00000556622 UNC13AQ9UPW8 1703 aa10.77□□□□□ -0.69
CPSF2-205ENST00000556622 GOLGA8CPA6NN73 597 aa10.75□□□□□ -0.69
CPSF2-205ENST00000556622 MRPL50Q8N5N7 158 aaKnown RBP10.75□□□□□ -0.69
CPSF2-205ENST00000556622 FOSBP53539 338 aa10.74□□□□□ -0.69
CPSF2-205ENST00000556622 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
CPSF2-205ENST00000556622 PTPREP23469 700 aa10.72□□□□□ -0.69
CPSF2-205ENST00000556622 SCRIBQ14160 1630 aa10.71□□□□□ -0.69
CPSF2-205ENST00000556622 Q6ZNB5 142 aa10.71□□□□□ -0.69
CPSF2-205ENST00000556622 SPRYD3Q8NCJ5 442 aa10.71□□□□□ -0.69
CPSF2-205ENST00000556622 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
CPSF2-205ENST00000556622 ADAM33Q9BZ11 813 aa10.68□□□□□ -0.7
CPSF2-205ENST00000556622 ITGBL1O95965 494 aaPredicted RBP10.65□□□□□ -0.7
CPSF2-205ENST00000556622 NBPF3Q9H094 633 aa10.65□□□□□ -0.7
CPSF2-205ENST00000556622 LCE2BO14633 110 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms