RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 CASKIN1Q8WXD9 1431 aa17.1■□□□□ 0.33
SPTLC2-205ENST00000556607 CCDC18Q5T9S5 1454 aa17.1■□□□□ 0.33
SPTLC2-205ENST00000556607 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
SPTLC2-205ENST00000556607 ZFYVE16Q7Z3T8 1539 aa17.09■□□□□ 0.33
SPTLC2-205ENST00000556607 MADDQ8WXG6 1647 aa17.07■□□□□ 0.32
SPTLC2-205ENST00000556607 ZMYM4Q5VZL5 1548 aa17.06■□□□□ 0.32
SPTLC2-205ENST00000556607 PLPPR3Q6T4P5 718 aa17.06■□□□□ 0.32
SPTLC2-205ENST00000556607 PTPRMP28827 1452 aa17.05■□□□□ 0.32
SPTLC2-205ENST00000556607 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
SPTLC2-205ENST00000556607 POGZQ7Z3K3 1410 aa17.05■□□□□ 0.32
SPTLC2-205ENST00000556607 YEATS2Q9ULM3 1422 aa17.05■□□□□ 0.32
SPTLC2-205ENST00000556607 CDC42BPBQ9Y5S2 1711 aa17.05■□□□□ 0.32
SPTLC2-205ENST00000556607 MLECQ14165 292 aa17.05■□□□□ 0.32
SPTLC2-205ENST00000556607 RIMS1Q86UR5 1692 aaKnown RBP17.04■□□□□ 0.32
SPTLC2-205ENST00000556607 MAGI2Q86UL8 1455 aa17.04■□□□□ 0.32
SPTLC2-205ENST00000556607 PREX2Q70Z35 1606 aa17.01■□□□□ 0.31
SPTLC2-205ENST00000556607 ZNF518AQ6AHZ1 1483 aa17■□□□□ 0.31
SPTLC2-205ENST00000556607 AFAP1Q8N556 730 aa17■□□□□ 0.31
SPTLC2-205ENST00000556607 SIGLEC1Q9BZZ2 1709 aa17■□□□□ 0.31
SPTLC2-205ENST00000556607 CDC42BPAQ5VT25 1732 aa16.99■□□□□ 0.31
SPTLC2-205ENST00000556607 ZNF777Q9ULD5 760 aaPredicted RBP16.99■□□□□ 0.31
SPTLC2-205ENST00000556607 ATP10AO60312 1499 aa16.98■□□□□ 0.31
SPTLC2-205ENST00000556607 FER1L4A9Z1Z3 1794 aa16.97■□□□□ 0.31
SPTLC2-205ENST00000556607 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.31
SPTLC2-205ENST00000556607 ITSN2Q9NZM3 1697 aa16.95■□□□□ 0.3
SPTLC2-205ENST00000556607 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
SPTLC2-205ENST00000556607 CEP162Q5TB80 1403 aa16.94■□□□□ 0.3
SPTLC2-205ENST00000556607 KDM5CP41229 1560 aa16.94■□□□□ 0.3
SPTLC2-205ENST00000556607 ABCC1P33527 1531 aa16.93■□□□□ 0.3
SPTLC2-205ENST00000556607 TRAPPC8Q9Y2L5 1435 aa16.91■□□□□ 0.3
SPTLC2-205ENST00000556607 CCNB3Q8WWL7 1395 aa16.9■□□□□ 0.3
SPTLC2-205ENST00000556607 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
SPTLC2-205ENST00000556607 DIP2CQ9Y2E4 1556 aa16.89■□□□□ 0.3
SPTLC2-205ENST00000556607 ABCA6Q8N139 1617 aa16.89■□□□□ 0.29
SPTLC2-205ENST00000556607 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
SPTLC2-205ENST00000556607 SAMD9LQ8IVG5 1584 aa16.89■□□□□ 0.29
SPTLC2-205ENST00000556607 GPATCH8Q9UKJ3 1502 aaKnown RBP16.88■□□□□ 0.29
SPTLC2-205ENST00000556607 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
SPTLC2-205ENST00000556607 MLH3Q9UHC1 1453 aa16.87■□□□□ 0.29
SPTLC2-205ENST00000556607 SYCP2Q9BX26 1530 aa16.87■□□□□ 0.29
SPTLC2-205ENST00000556607 HNRNPMP52272 730 aaKnown RBP eCLIP16.87■□□□□ 0.29
SPTLC2-205ENST00000556607 ESF1Q9H501 851 aaKnown RBP16.87■□□□□ 0.29
SPTLC2-205ENST00000556607 KIDINS220Q9ULH0 1771 aa16.86■□□□□ 0.29
SPTLC2-205ENST00000556607 ILDR1Q86SU0 546 aaPredicted RBP16.85■□□□□ 0.29
SPTLC2-205ENST00000556607 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
SPTLC2-205ENST00000556607 EHBP1L1Q8N3D4 1523 aa16.85■□□□□ 0.29
SPTLC2-205ENST00000556607 CEBPAP49715 358 aaPredicted RBP16.84■□□□□ 0.29
SPTLC2-205ENST00000556607 HSPA2P54652 639 aa16.84■□□□□ 0.29
SPTLC2-205ENST00000556607 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.28
SPTLC2-205ENST00000556607 REREQ9P2R6 1566 aa16.82■□□□□ 0.28
SPTLC2-205ENST00000556607 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
SPTLC2-205ENST00000556607 PLEKHH2Q8IVE3 1493 aa16.81■□□□□ 0.28
SPTLC2-205ENST00000556607 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
SPTLC2-205ENST00000556607 PREX1Q8TCU6 1659 aa16.79■□□□□ 0.28
SPTLC2-205ENST00000556607 AGLP35573 1532 aa16.78■□□□□ 0.28
SPTLC2-205ENST00000556607 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
SPTLC2-205ENST00000556607 KIAA1107Q9UPP5 1409 aa16.78■□□□□ 0.28
SPTLC2-205ENST00000556607 ZNF644Q9H582 1327 aaPredicted RBP16.77■□□□□ 0.28
SPTLC2-205ENST00000556607 C3P01024 1663 aa16.76■□□□□ 0.27
SPTLC2-205ENST00000556607 INO80Q9ULG1 1556 aaPredicted RBP16.74■□□□□ 0.27
SPTLC2-205ENST00000556607 VPS8Q8N3P4 1428 aa16.74■□□□□ 0.27
SPTLC2-205ENST00000556607 NCOA2Q15596 1464 aa16.73■□□□□ 0.27
SPTLC2-205ENST00000556607 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
SPTLC2-205ENST00000556607 UHRF1BP1Q6BDS2 1440 aa16.72■□□□□ 0.27
SPTLC2-205ENST00000556607 SETD1BQ9UPS6 1966 aaKnown RBP16.72■□□□□ 0.27
SPTLC2-205ENST00000556607 GGT6Q6P531 493 aa16.72■□□□□ 0.27
SPTLC2-205ENST00000556607 A2MP01023 1474 aa16.72■□□□□ 0.27
SPTLC2-205ENST00000556607 CNTLNQ9NXG0 1405 aa16.7■□□□□ 0.26
SPTLC2-205ENST00000556607 CLTCQ00610 1675 aaKnown RBP16.69■□□□□ 0.26
SPTLC2-205ENST00000556607 CAMSAP2Q08AD1 1489 aa16.68■□□□□ 0.26
SPTLC2-205ENST00000556607 LRRC9Q6ZRR7 1453 aa16.67■□□□□ 0.26
SPTLC2-205ENST00000556607 MBD5Q9P267 1494 aa16.67■□□□□ 0.26
SPTLC2-205ENST00000556607 MROH2AA6NES4 1674 aa16.67■□□□□ 0.26
SPTLC2-205ENST00000556607 APLP2Q06481 763 aa16.67■□□□□ 0.26
SPTLC2-205ENST00000556607 PLXNC1O60486 1568 aa16.66■□□□□ 0.26
SPTLC2-205ENST00000556607 CCDC141Q6ZP82 1450 aa16.66■□□□□ 0.26
SPTLC2-205ENST00000556607 TSPY4P0CV99 314 aa16.65■□□□□ 0.26
SPTLC2-205ENST00000556607 TSPY10P0CW01 314 aa16.65■□□□□ 0.26
SPTLC2-205ENST00000556607 RSPH4AQ5TD94 716 aa16.65■□□□□ 0.26
SPTLC2-205ENST00000556607 FBXO41Q8TF61 875 aa16.65■□□□□ 0.26
SPTLC2-205ENST00000556607 ZMYM3Q14202 1370 aa16.64■□□□□ 0.26
SPTLC2-205ENST00000556607 RTEL1-TNFRSF6BF6WH68 1400 aa16.64■□□□□ 0.25
SPTLC2-205ENST00000556607 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.25
SPTLC2-205ENST00000556607 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
SPTLC2-205ENST00000556607 STRCQ7RTU9 1775 aa16.63■□□□□ 0.25
SPTLC2-205ENST00000556607 KIF3BO15066 747 aa16.61■□□□□ 0.25
SPTLC2-205ENST00000556607 DHX29Q7Z478 1369 aaKnown RBP16.61■□□□□ 0.25
SPTLC2-205ENST00000556607 MAP3K1Q13233 1512 aa16.6■□□□□ 0.25
SPTLC2-205ENST00000556607 ARHGEF5Q12774 1597 aa16.59■□□□□ 0.25
SPTLC2-205ENST00000556607 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
SPTLC2-205ENST00000556607 NPATQ14207 1427 aa16.58■□□□□ 0.24
SPTLC2-205ENST00000556607 CERKQ8TCT0 537 aa16.57■□□□□ 0.24
SPTLC2-205ENST00000556607 MYOM3Q5VTT5 1437 aa16.56■□□□□ 0.24
SPTLC2-205ENST00000556607 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
SPTLC2-205ENST00000556607 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
SPTLC2-205ENST00000556607 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
SPTLC2-205ENST00000556607 PTPRKQ15262 1439 aa16.53■□□□□ 0.24
SPTLC2-205ENST00000556607 MIA2Q96PC5 1412 aa16.53■□□□□ 0.24
SPTLC2-205ENST00000556607 KDM5DQ9BY66 1539 aa16.51■□□□□ 0.23
SPTLC2-205ENST00000556607 ZNF142P52746 1687 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms