RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 TIAM1Q13009 1591 aa26.84■■□□□ 1.89
PSEN1-217ENST00000556533 ADGRL1O94910 1474 aa26.83■■□□□ 1.89
PSEN1-217ENST00000556533 KANK4Q5T7N3 995 aaPredicted RBP26.83■■□□□ 1.89
PSEN1-217ENST00000556533 EHBP1L1Q8N3D4 1523 aa26.83■■□□□ 1.89
PSEN1-217ENST00000556533 CFDP1Q9UEE9 299 aaPredicted RBP26.81■■□□□ 1.88
PSEN1-217ENST00000556533 GPATCH8Q9UKJ3 1502 aaKnown RBP26.8■■□□□ 1.88
PSEN1-217ENST00000556533 LRRC9Q6ZRR7 1453 aa26.77■■□□□ 1.88
PSEN1-217ENST00000556533 MAP3K1Q13233 1512 aa26.75■■□□□ 1.87
PSEN1-217ENST00000556533 AFAP1Q8N556 730 aa26.74■■□□□ 1.87
PSEN1-217ENST00000556533 MYT1LQ9UL68 1186 aa26.74■■□□□ 1.87
PSEN1-217ENST00000556533 PREX2Q70Z35 1606 aa26.74■■□□□ 1.87
PSEN1-217ENST00000556533 CDC42BPBQ9Y5S2 1711 aa26.73■■□□□ 1.87
PSEN1-217ENST00000556533 NCOA2Q15596 1464 aa26.73■■□□□ 1.87
PSEN1-217ENST00000556533 FRMPD1Q5SYB0 1578 aa26.71■■□□□ 1.87
PSEN1-217ENST00000556533 POGZQ7Z3K3 1410 aa26.71■■□□□ 1.87
PSEN1-217ENST00000556533 CDC42BPAQ5VT25 1732 aa26.7■■□□□ 1.87
PSEN1-217ENST00000556533 HNRNPMP52272 730 aaKnown RBP eCLIP26.7■■□□□ 1.86
PSEN1-217ENST00000556533 ZNF644Q9H582 1327 aaPredicted RBP26.68■■□□□ 1.86
PSEN1-217ENST00000556533 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
PSEN1-217ENST00000556533 SUPT6HQ7KZ85 1726 aaKnown RBP26.67■■□□□ 1.86
PSEN1-217ENST00000556533 RICTORQ6R327 1708 aa26.65■■□□□ 1.86
PSEN1-217ENST00000556533 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
PSEN1-217ENST00000556533 TRAPPC8Q9Y2L5 1435 aa26.65■■□□□ 1.86
PSEN1-217ENST00000556533 ARID4BQ4LE39 1312 aaPredicted RBP26.65■■□□□ 1.86
PSEN1-217ENST00000556533 KDM4FA0A1W2PPD8 638 aa26.64■■□□□ 1.86
PSEN1-217ENST00000556533 ZNF518AQ6AHZ1 1483 aa26.63■■□□□ 1.85
PSEN1-217ENST00000556533 ABCC1P33527 1531 aa26.62■■□□□ 1.85
PSEN1-217ENST00000556533 YEATS2Q9ULM3 1422 aa26.62■■□□□ 1.85
PSEN1-217ENST00000556533 SAMD9LQ8IVG5 1584 aa26.61■■□□□ 1.85
PSEN1-217ENST00000556533 ZMYM4Q5VZL5 1548 aa26.6■■□□□ 1.85
PSEN1-217ENST00000556533 MAGI2Q86UL8 1455 aa26.59■■□□□ 1.85
PSEN1-217ENST00000556533 ZFYVE16Q7Z3T8 1539 aa26.59■■□□□ 1.85
PSEN1-217ENST00000556533 PLEKHH2Q8IVE3 1493 aa26.58■■□□□ 1.85
PSEN1-217ENST00000556533 SYCP2Q9BX26 1530 aa26.58■■□□□ 1.85
PSEN1-217ENST00000556533 KIAA1107Q9UPP5 1409 aa26.57■■□□□ 1.84
PSEN1-217ENST00000556533 ITSN2Q9NZM3 1697 aa26.57■■□□□ 1.84
PSEN1-217ENST00000556533 PPARGC1BQ86YN6 1023 aaKnown RBP26.56■■□□□ 1.84
PSEN1-217ENST00000556533 SPAG9O60271 1321 aaKnown RBP26.55■■□□□ 1.84
PSEN1-217ENST00000556533 ARHGEF40Q8TER5 1519 aa26.53■■□□□ 1.84
PSEN1-217ENST00000556533 MYOM3Q5VTT5 1437 aa26.52■■□□□ 1.84
PSEN1-217ENST00000556533 KDM5CP41229 1560 aa26.51■■□□□ 1.83
PSEN1-217ENST00000556533 ATP10AO60312 1499 aa26.5■■□□□ 1.83
PSEN1-217ENST00000556533 CAMSAP2Q08AD1 1489 aa26.49■■□□□ 1.83
PSEN1-217ENST00000556533 MLH3Q9UHC1 1453 aa26.49■■□□□ 1.83
PSEN1-217ENST00000556533 MLECQ14165 292 aa26.48■■□□□ 1.83
PSEN1-217ENST00000556533 HECW2Q9P2P5 1572 aa26.46■■□□□ 1.83
PSEN1-217ENST00000556533 MBD5Q9P267 1494 aa26.46■■□□□ 1.83
PSEN1-217ENST00000556533 MIA2Q96PC5 1412 aa26.45■■□□□ 1.82
PSEN1-217ENST00000556533 RSPH4AQ5TD94 716 aa26.44■■□□□ 1.82
PSEN1-217ENST00000556533 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
PSEN1-217ENST00000556533 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
PSEN1-217ENST00000556533 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
PSEN1-217ENST00000556533 DIP2CQ9Y2E4 1556 aa26.39■■□□□ 1.82
PSEN1-217ENST00000556533 CCDC141Q6ZP82 1450 aa26.38■■□□□ 1.81
PSEN1-217ENST00000556533 ABCA6Q8N139 1617 aa26.37■■□□□ 1.81
PSEN1-217ENST00000556533 FGD6Q6ZV73 1430 aa26.37■■□□□ 1.81
PSEN1-217ENST00000556533 KIDINS220Q9ULH0 1771 aa26.36■■□□□ 1.81
PSEN1-217ENST00000556533 ATP7AQ04656 1500 aa26.36■■□□□ 1.81
PSEN1-217ENST00000556533 FAM50AQ14320 339 aaKnown RBP26.36■■□□□ 1.81
PSEN1-217ENST00000556533 SIGLEC1Q9BZZ2 1709 aa26.33■■□□□ 1.81
PSEN1-217ENST00000556533 PLPPR3Q6T4P5 718 aa26.32■■□□□ 1.8
PSEN1-217ENST00000556533 RTEL1-TNFRSF6BF6WH68 1400 aa26.31■■□□□ 1.8
PSEN1-217ENST00000556533 PTPN23Q9H3S7 1636 aa26.31■■□□□ 1.8
PSEN1-217ENST00000556533 BCORL1Q5H9F3 1711 aa26.31■■□□□ 1.8
PSEN1-217ENST00000556533 ARHGEF5Q12774 1597 aa26.3■■□□□ 1.8
PSEN1-217ENST00000556533 INO80Q9ULG1 1556 aaPredicted RBP26.3■■□□□ 1.8
PSEN1-217ENST00000556533 A2MP01023 1474 aa26.28■■□□□ 1.8
PSEN1-217ENST00000556533 ADAMTSL3P82987 1691 aa26.27■■□□□ 1.8
PSEN1-217ENST00000556533 REREQ9P2R6 1566 aa26.25■■□□□ 1.79
PSEN1-217ENST00000556533 TCOF1Q13428 1488 aaKnown RBP26.25■■□□□ 1.79
PSEN1-217ENST00000556533 ESF1Q9H501 851 aaKnown RBP26.25■■□□□ 1.79
PSEN1-217ENST00000556533 MADDQ8WXG6 1647 aa26.25■■□□□ 1.79
PSEN1-217ENST00000556533 CHIC2Q9UKJ5 165 aa26.24■■□□□ 1.79
PSEN1-217ENST00000556533 ABCC5O15440 1437 aa26.23■■□□□ 1.79
PSEN1-217ENST00000556533 PTPRMP28827 1452 aa26.23■■□□□ 1.79
PSEN1-217ENST00000556533 DHX29Q7Z478 1369 aaKnown RBP26.22■■□□□ 1.79
PSEN1-217ENST00000556533 GGT6Q6P531 493 aa26.22■■□□□ 1.79
PSEN1-217ENST00000556533 AGLP35573 1532 aa26.22■■□□□ 1.79
PSEN1-217ENST00000556533 DAPK1P53355 1430 aa26.2■■□□□ 1.78
PSEN1-217ENST00000556533 KIF3BO15066 747 aa26.19■■□□□ 1.78
PSEN1-217ENST00000556533 RRP7BPQ9NSQ0 103 aa26.19■■□□□ 1.78
PSEN1-217ENST00000556533 RIMS1Q86UR5 1692 aaKnown RBP26.16■■□□□ 1.78
PSEN1-217ENST00000556533 ITGAEP38570 1179 aa26.16■■□□□ 1.78
PSEN1-217ENST00000556533 CEBPAP49715 358 aaPredicted RBP26.16■■□□□ 1.78
PSEN1-217ENST00000556533 ADGBQ8N7X0 1667 aa26.15■■□□□ 1.78
PSEN1-217ENST00000556533 MAST1Q9Y2H9 1570 aa26.14■■□□□ 1.78
PSEN1-217ENST00000556533 PLXNC1O60486 1568 aa26.13■■□□□ 1.77
PSEN1-217ENST00000556533 DNMT1P26358 1616 aaKnown RBP26.12■■□□□ 1.77
PSEN1-217ENST00000556533 SHANK2Q9UPX8 1470 aa26.11■■□□□ 1.77
PSEN1-217ENST00000556533 KIF15Q9NS87 1388 aa26.1■■□□□ 1.77
PSEN1-217ENST00000556533 FER1L4A9Z1Z3 1794 aa26.1■■□□□ 1.77
PSEN1-217ENST00000556533 ANKRD30AQ9BXX3 1397 aa26.09■■□□□ 1.77
PSEN1-217ENST00000556533 PPP6R1Q9UPN7 881 aa26.05■■□□□ 1.76
PSEN1-217ENST00000556533 CROCC2H7BZ55 1655 aa26.05■■□□□ 1.76
PSEN1-217ENST00000556533 CNTLNQ9NXG0 1405 aa26.04■■□□□ 1.76
PSEN1-217ENST00000556533 NCOA1Q15788 1441 aa26.03■■□□□ 1.76
PSEN1-217ENST00000556533 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
PSEN1-217ENST00000556533 WASHC2CQ9Y4E1 1318 aa26.02■■□□□ 1.76
PSEN1-217ENST00000556533 PTPRKQ15262 1439 aa26.02■■□□□ 1.76
PSEN1-217ENST00000556533 ZMYM3Q14202 1370 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms