RNA–Protein interactions for RNA: ENST00000556523.1

SDR39U1-219, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 735 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-219ENST00000556523 KIF14Q15058 1648 aa29.04■■■□□ 2.24
SDR39U1-219ENST00000556523 SCAPERQ9BY12 1400 aa29.03■■■□□ 2.24
SDR39U1-219ENST00000556523 YEATS2Q9ULM3 1422 aa29.03■■■□□ 2.24
SDR39U1-219ENST00000556523 PCF11O94913 1555 aaKnown RBP29.01■■■□□ 2.24
SDR39U1-219ENST00000556523 CLIP1P30622 1438 aa29■■■□□ 2.23
SDR39U1-219ENST00000556523 TROQ12816 1431 aaPredicted RBP28.98■■■□□ 2.23
SDR39U1-219ENST00000556523 EFCAB2Q5VUJ9 269 aa28.98■■■□□ 2.23
SDR39U1-219ENST00000556523 SIGLEC1Q9BZZ2 1709 aa28.94■■■□□ 2.22
SDR39U1-219ENST00000556523 LMTK3Q96Q04 1460 aa28.94■■■□□ 2.22
SDR39U1-219ENST00000556523 ARHGAP5Q13017 1502 aa28.94■■■□□ 2.22
SDR39U1-219ENST00000556523 FER1L4A9Z1Z3 1794 aa28.91■■■□□ 2.22
SDR39U1-219ENST00000556523 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
SDR39U1-219ENST00000556523 PLPPR3Q6T4P5 718 aa28.9■■■□□ 2.22
SDR39U1-219ENST00000556523 C9orf84Q5VXU9 1444 aa28.89■■■□□ 2.22
SDR39U1-219ENST00000556523 MLECQ14165 292 aa28.89■■■□□ 2.22
SDR39U1-219ENST00000556523 ZNF518AQ6AHZ1 1483 aa28.89■■■□□ 2.22
SDR39U1-219ENST00000556523 ATP10AO60312 1499 aa28.88■■■□□ 2.21
SDR39U1-219ENST00000556523 CCDC18Q5T9S5 1454 aa28.87■■■□□ 2.21
SDR39U1-219ENST00000556523 CASKIN1Q8WXD9 1431 aa28.83■■■□□ 2.21
SDR39U1-219ENST00000556523 KDM5CP41229 1560 aa28.82■■■□□ 2.2
SDR39U1-219ENST00000556523 ARHGEF12Q9NZN5 1544 aa28.81■■■□□ 2.2
SDR39U1-219ENST00000556523 MYT1LQ9UL68 1186 aa28.81■■■□□ 2.2
SDR39U1-219ENST00000556523 PREX2Q70Z35 1606 aa28.8■■■□□ 2.2
SDR39U1-219ENST00000556523 CDC42BPBQ9Y5S2 1711 aa28.78■■■□□ 2.2
SDR39U1-219ENST00000556523 FBXO41Q8TF61 875 aa28.77■■■□□ 2.2
SDR39U1-219ENST00000556523 FYCO1Q9BQS8 1478 aa28.76■■■□□ 2.19
SDR39U1-219ENST00000556523 HSPA2P54652 639 aa28.75■■■□□ 2.19
SDR39U1-219ENST00000556523 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
SDR39U1-219ENST00000556523 DIP2CQ9Y2E4 1556 aa28.74■■■□□ 2.19
SDR39U1-219ENST00000556523 ABCC1P33527 1531 aa28.74■■■□□ 2.19
SDR39U1-219ENST00000556523 ITSN2Q9NZM3 1697 aa28.7■■■□□ 2.19
SDR39U1-219ENST00000556523 REREQ9P2R6 1566 aa28.7■■■□□ 2.18
SDR39U1-219ENST00000556523 ABCA6Q8N139 1617 aa28.69■■■□□ 2.18
SDR39U1-219ENST00000556523 MLH3Q9UHC1 1453 aa28.69■■■□□ 2.18
SDR39U1-219ENST00000556523 PREX1Q8TCU6 1659 aa28.68■■■□□ 2.18
SDR39U1-219ENST00000556523 CDC42BPAQ5VT25 1732 aa28.67■■■□□ 2.18
SDR39U1-219ENST00000556523 TRAPPC8Q9Y2L5 1435 aa28.66■■■□□ 2.18
SDR39U1-219ENST00000556523 CEBPAP49715 358 aaPredicted RBP28.6■■■□□ 2.17
SDR39U1-219ENST00000556523 AGLP35573 1532 aa28.59■■■□□ 2.17
SDR39U1-219ENST00000556523 ESF1Q9H501 851 aaKnown RBP28.57■■■□□ 2.16
SDR39U1-219ENST00000556523 UHRF1BP1Q6BDS2 1440 aa28.57■■■□□ 2.16
SDR39U1-219ENST00000556523 KIDINS220Q9ULH0 1771 aa28.57■■■□□ 2.16
SDR39U1-219ENST00000556523 ZNF777Q9ULD5 760 aaPredicted RBP28.56■■■□□ 2.16
SDR39U1-219ENST00000556523 SAMD9LQ8IVG5 1584 aa28.55■■■□□ 2.16
SDR39U1-219ENST00000556523 SYCP2Q9BX26 1530 aa28.54■■■□□ 2.16
SDR39U1-219ENST00000556523 C3P01024 1663 aa28.52■■■□□ 2.16
SDR39U1-219ENST00000556523 GPATCH8Q9UKJ3 1502 aaKnown RBP28.52■■■□□ 2.16
SDR39U1-219ENST00000556523 SETD1BQ9UPS6 1966 aaKnown RBP28.51■■■□□ 2.16
SDR39U1-219ENST00000556523 MTUS2Q5JR59 1369 aa28.5■■■□□ 2.15
SDR39U1-219ENST00000556523 PLEKHH2Q8IVE3 1493 aa28.48■■■□□ 2.15
SDR39U1-219ENST00000556523 CNTLNQ9NXG0 1405 aa28.48■■■□□ 2.15
SDR39U1-219ENST00000556523 CCNB3Q8WWL7 1395 aa28.48■■■□□ 2.15
SDR39U1-219ENST00000556523 SPAG9O60271 1321 aaKnown RBP28.47■■■□□ 2.15
SDR39U1-219ENST00000556523 CFDP1Q9UEE9 299 aaPredicted RBP28.45■■■□□ 2.14
SDR39U1-219ENST00000556523 CERKQ8TCT0 537 aa28.44■■■□□ 2.14
SDR39U1-219ENST00000556523 ATP7AQ04656 1500 aa28.43■■■□□ 2.14
SDR39U1-219ENST00000556523 DMRT2Q9Y5R5 561 aa28.43■■■□□ 2.14
SDR39U1-219ENST00000556523 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
SDR39U1-219ENST00000556523 HNRNPMP52272 730 aaKnown RBP eCLIP28.42■■■□□ 2.14
SDR39U1-219ENST00000556523 STRCQ7RTU9 1775 aa28.41■■■□□ 2.14
SDR39U1-219ENST00000556523 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
SDR39U1-219ENST00000556523 EHBP1L1Q8N3D4 1523 aa28.4■■■□□ 2.14
SDR39U1-219ENST00000556523 SUPT6HQ7KZ85 1726 aaKnown RBP28.4■■■□□ 2.14
SDR39U1-219ENST00000556523 MROH2AA6NES4 1674 aa28.39■■■□□ 2.14
SDR39U1-219ENST00000556523 TIAM1Q13009 1591 aa28.36■■■□□ 2.13
SDR39U1-219ENST00000556523 A2MP01023 1474 aa28.34■■■□□ 2.13
SDR39U1-219ENST00000556523 PLXNC1O60486 1568 aa28.34■■■□□ 2.13
SDR39U1-219ENST00000556523 CEP162Q5TB80 1403 aa28.34■■■□□ 2.13
SDR39U1-219ENST00000556523 NPATQ14207 1427 aa28.32■■■□□ 2.12
SDR39U1-219ENST00000556523 PTPRTO14522 1441 aa28.3■■■□□ 2.12
SDR39U1-219ENST00000556523 ADGBQ8N7X0 1667 aa28.29■■■□□ 2.12
SDR39U1-219ENST00000556523 CLTCQ00610 1675 aaKnown RBP28.29■■■□□ 2.12
SDR39U1-219ENST00000556523 ZMYM3Q14202 1370 aa28.27■■■□□ 2.12
SDR39U1-219ENST00000556523 NCOA1Q15788 1441 aa28.26■■■□□ 2.11
SDR39U1-219ENST00000556523 ZNF644Q9H582 1327 aaPredicted RBP28.23■■■□□ 2.11
SDR39U1-219ENST00000556523 GGT6Q6P531 493 aa28.22■■■□□ 2.11
SDR39U1-219ENST00000556523 CAMSAP1Q5T5Y3 1602 aa28.21■■■□□ 2.11
SDR39U1-219ENST00000556523 MBD5Q9P267 1494 aa28.21■■■□□ 2.11
SDR39U1-219ENST00000556523 MYO3AQ8NEV4 1616 aa28.2■■■□□ 2.1
SDR39U1-219ENST00000556523 RTEL1-TNFRSF6BF6WH68 1400 aa28.18■■■□□ 2.1
SDR39U1-219ENST00000556523 ZNF142P52746 1687 aaPredicted RBP28.18■■■□□ 2.1
SDR39U1-219ENST00000556523 NCOA2Q15596 1464 aa28.17■■■□□ 2.1
SDR39U1-219ENST00000556523 CCDC141Q6ZP82 1450 aa28.16■■■□□ 2.1
SDR39U1-219ENST00000556523 CAMSAP2Q08AD1 1489 aa28.15■■■□□ 2.1
SDR39U1-219ENST00000556523 PPP6R1Q9UPN7 881 aa28.15■■■□□ 2.1
SDR39U1-219ENST00000556523 PTPRKQ15262 1439 aa28.15■■■□□ 2.1
SDR39U1-219ENST00000556523 CEP170BQ9Y4F5 1589 aaPredicted RBP28.14■■■□□ 2.1
SDR39U1-219ENST00000556523 DHX29Q7Z478 1369 aaKnown RBP28.11■■■□□ 2.09
SDR39U1-219ENST00000556523 LTBP4Q8N2S1 1624 aa28.1■■■□□ 2.09
SDR39U1-219ENST00000556523 PLA2R1Q13018 1463 aa28.09■■■□□ 2.09
SDR39U1-219ENST00000556523 IQSEC2Q5JU85 1478 aa28.08■■■□□ 2.09
SDR39U1-219ENST00000556523 RSPH4AQ5TD94 716 aa28.06■■■□□ 2.08
SDR39U1-219ENST00000556523 NCKAP5LQ9HCH0 1330 aa28.06■■■□□ 2.08
SDR39U1-219ENST00000556523 PKD2Q13563 968 aa28.05■■■□□ 2.08
SDR39U1-219ENST00000556523 VPS8Q8N3P4 1428 aa28.05■■■□□ 2.08
SDR39U1-219ENST00000556523 FAM135AQ9P2D6 1515 aa28.05■■■□□ 2.08
SDR39U1-219ENST00000556523 KDM5DQ9BY66 1539 aa28.04■■■□□ 2.08
SDR39U1-219ENST00000556523 KIF3BO15066 747 aa28.04■■■□□ 2.08
SDR39U1-219ENST00000556523 ARHGEF5Q12774 1597 aa28.03■■■□□ 2.08
SDR39U1-219ENST00000556523 A2ML1A8K2U0 1454 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms