RNA–Protein interactions for RNA: ENST00000556479.5

LINC00640-203, long intergenic non-protein coding RNA 640, humanhuman

TSL 2 BASIC

Gene LINC00640, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-203ENST00000556479 PDE4AP27815 886 aa9.75□□□□□ -0.85
LINC00640-203ENST00000556479 TMEM92Q6UXU6 159 aa9.74□□□□□ -0.85
LINC00640-203ENST00000556479 GPHNQ9NQX3 736 aaPredicted RBP9.73□□□□□ -0.85
LINC00640-203ENST00000556479 KIF3CO14782 793 aa9.72□□□□□ -0.85
LINC00640-203ENST00000556479 MFSD10Q14728 455 aa9.72□□□□□ -0.85
LINC00640-203ENST00000556479 LARP6Q9BRS8 491 aaKnown RBP9.72□□□□□ -0.85
LINC00640-203ENST00000556479 C2orf72A6NCS6 295 aa9.69□□□□□ -0.86
LINC00640-203ENST00000556479 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
LINC00640-203ENST00000556479 TMC2Q8TDI7 906 aa9.68□□□□□ -0.86
LINC00640-203ENST00000556479 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.68□□□□□ -0.86
LINC00640-203ENST00000556479 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
LINC00640-203ENST00000556479 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
LINC00640-203ENST00000556479 FOXK1P85037 733 aa9.66□□□□□ -0.86
LINC00640-203ENST00000556479 DSG2Q14126 1118 aa9.66□□□□□ -0.86
LINC00640-203ENST00000556479 MAMSTRQ6ZN01 415 aa9.65□□□□□ -0.86
LINC00640-203ENST00000556479 PPP1R15BQ5SWA1 713 aa9.64□□□□□ -0.87
LINC00640-203ENST00000556479 LHX8Q68G74 356 aa9.63□□□□□ -0.87
LINC00640-203ENST00000556479 CAMK2BQ13554 666 aa9.62□□□□□ -0.87
LINC00640-203ENST00000556479 E2F4Q16254 413 aa9.62□□□□□ -0.87
LINC00640-203ENST00000556479 PLPP6Q8IY26 295 aa9.61□□□□□ -0.87
LINC00640-203ENST00000556479 SCUBE2Q9NQ36 999 aa9.61□□□□□ -0.87
LINC00640-203ENST00000556479 OTUD5Q96G74 571 aa9.6□□□□□ -0.87
LINC00640-203ENST00000556479 KCNV2Q8TDN2 545 aa9.59□□□□□ -0.87
LINC00640-203ENST00000556479 SLAIN1Q8ND83 568 aa9.58□□□□□ -0.88
LINC00640-203ENST00000556479 P3H3Q8IVL6 736 aa9.56□□□□□ -0.88
LINC00640-203ENST00000556479 EMILIN3Q9NT22 766 aa9.56□□□□□ -0.88
LINC00640-203ENST00000556479 ARIH1Q9Y4X5 557 aaPredicted RBP9.56□□□□□ -0.88
LINC00640-203ENST00000556479 ARHGEF1Q92888 912 aaKnown RBP9.54□□□□□ -0.88
LINC00640-203ENST00000556479 SLC34A2O95436 690 aa9.52□□□□□ -0.89
LINC00640-203ENST00000556479 OXER1Q8TDS5 423 aa9.51□□□□□ -0.89
LINC00640-203ENST00000556479 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
LINC00640-203ENST00000556479 PTCD2Q8WV60 388 aaKnown RBP9.5□□□□□ -0.89
LINC00640-203ENST00000556479 DPYSL4O14531 572 aa9.47□□□□□ -0.89
LINC00640-203ENST00000556479 BCANQ96GW7 911 aa9.47□□□□□ -0.89
LINC00640-203ENST00000556479 UPF1Q92900 1129 aaKnown RBP eCLIP9.46□□□□□ -0.9
LINC00640-203ENST00000556479 MAP3K9P80192 1104 aa9.44□□□□□ -0.9
LINC00640-203ENST00000556479 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
LINC00640-203ENST00000556479 NBR1Q14596 966 aa9.43□□□□□ -0.9
LINC00640-203ENST00000556479 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
LINC00640-203ENST00000556479 KDM4FA0A1W2PPD8 638 aa9.42□□□□□ -0.9
LINC00640-203ENST00000556479 SPDYE16A6NNV3 312 aaPredicted RBP9.42□□□□□ -0.9
LINC00640-203ENST00000556479 SNPHO15079 494 aa9.42□□□□□ -0.9
LINC00640-203ENST00000556479 TBC1D12O60347 775 aa9.42□□□□□ -0.9
LINC00640-203ENST00000556479 PDIA6Q15084 440 aa9.42□□□□□ -0.9
LINC00640-203ENST00000556479 GPR153Q6NV75 609 aa9.41□□□□□ -0.9
LINC00640-203ENST00000556479 ZSWIM6Q9HCJ5 1215 aa9.41□□□□□ -0.9
LINC00640-203ENST00000556479 SEMA3EO15041 775 aa9.4□□□□□ -0.9
LINC00640-203ENST00000556479 ANO8Q9HCE9 1232 aaPredicted RBP9.4□□□□□ -0.9
LINC00640-203ENST00000556479 TESPA1A2RU30 521 aaPredicted RBP9.38□□□□□ -0.91
LINC00640-203ENST00000556479 RIMBP2O15034 1052 aa9.38□□□□□ -0.91
LINC00640-203ENST00000556479 EVI5O60447 810 aa9.38□□□□□ -0.91
LINC00640-203ENST00000556479 ARSIQ5FYB1 569 aa9.38□□□□□ -0.91
LINC00640-203ENST00000556479 ZNF710Q8N1W2 664 aa9.37□□□□□ -0.91
LINC00640-203ENST00000556479 KHSRPQ92945 711 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00640-203ENST00000556479 PTGER2P43116 358 aa9.36□□□□□ -0.91
LINC00640-203ENST00000556479 HOXB1P14653 301 aaPredicted RBP9.35□□□□□ -0.91
LINC00640-203ENST00000556479 MLLT3P42568 568 aaPredicted RBP9.34□□□□□ -0.91
LINC00640-203ENST00000556479 NUDT7P0C024 238 aa9.33□□□□□ -0.92
LINC00640-203ENST00000556479 ST18O60284 1047 aa9.31□□□□□ -0.92
LINC00640-203ENST00000556479 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
LINC00640-203ENST00000556479 ZNF316A6NFI3 1004 aaPredicted RBP9.29□□□□□ -0.92
LINC00640-203ENST00000556479 DDX12PQ92771 950 aa9.29□□□□□ -0.92
LINC00640-203ENST00000556479 GRXCR2A6NFK2 248 aa9.28□□□□□ -0.92
LINC00640-203ENST00000556479 SMYD5Q6GMV2 418 aa9.28□□□□□ -0.92
LINC00640-203ENST00000556479 LHX6Q9UPM6 363 aa9.28□□□□□ -0.92
LINC00640-203ENST00000556479 OSBPP22059 807 aa9.27□□□□□ -0.93
LINC00640-203ENST00000556479 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
LINC00640-203ENST00000556479 FAM163AQ96GL9 167 aaPredicted RBP9.27□□□□□ -0.93
LINC00640-203ENST00000556479 PCDHGA10Q9Y5H3 936 aa9.26□□□□□ -0.93
LINC00640-203ENST00000556479 PHF14O94880 888 aa9.25□□□□□ -0.93
LINC00640-203ENST00000556479 PRIM1P49642 420 aaKnown RBP9.25□□□□□ -0.93
LINC00640-203ENST00000556479 FOSBP53539 338 aa9.25□□□□□ -0.93
LINC00640-203ENST00000556479 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
LINC00640-203ENST00000556479 LMOD2Q6P5Q4 547 aa9.24□□□□□ -0.93
LINC00640-203ENST00000556479 EPAS1Q99814 870 aa9.23□□□□□ -0.93
LINC00640-203ENST00000556479 TULP1O00294 542 aaPredicted RBP9.22□□□□□ -0.93
LINC00640-203ENST00000556479 RBM26Q5T8P6 1007 aaKnown RBP9.22□□□□□ -0.93
LINC00640-203ENST00000556479 TYW1BQ6NUM6 668 aa9.21□□□□□ -0.94
LINC00640-203ENST00000556479 ZNF454Q8N9F8 522 aa9.21□□□□□ -0.94
LINC00640-203ENST00000556479 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
LINC00640-203ENST00000556479 MARVELD3Q96A59 401 aa9.2□□□□□ -0.94
LINC00640-203ENST00000556479 EN1Q05925 392 aaPredicted RBP9.19□□□□□ -0.94
LINC00640-203ENST00000556479 FBXW7Q969H0 707 aa9.19□□□□□ -0.94
LINC00640-203ENST00000556479 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
LINC00640-203ENST00000556479 EMP3P54852 163 aa9.18□□□□□ -0.94
LINC00640-203ENST00000556479 ERBB3P21860 1342 aa9.17□□□□□ -0.94
LINC00640-203ENST00000556479 PPP4R3BQ5MIZ7 849 aa9.17□□□□□ -0.94
LINC00640-203ENST00000556479 ADAM33Q9BZ11 813 aa9.17□□□□□ -0.94
LINC00640-203ENST00000556479 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
LINC00640-203ENST00000556479 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
LINC00640-203ENST00000556479 RBM33Q96EV2 1170 aaKnown RBP9.16□□□□□ -0.94
LINC00640-203ENST00000556479 VARS2Q5ST30 1063 aaKnown RBP9.15□□□□□ -0.94
LINC00640-203ENST00000556479 FAM205CA6NFA0 338 aa9.14□□□□□ -0.95
LINC00640-203ENST00000556479 GPR37O15354 613 aa9.14□□□□□ -0.95
LINC00640-203ENST00000556479 MAP3K7O43318 606 aa9.14□□□□□ -0.95
LINC00640-203ENST00000556479 TSR1Q2NL82 804 aaKnown RBP9.14□□□□□ -0.95
LINC00640-203ENST00000556479 C6orf132Q5T0Z8 1188 aa9.14□□□□□ -0.95
LINC00640-203ENST00000556479 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
LINC00640-203ENST00000556479 BCL2L12Q9HB09 334 aa9.14□□□□□ -0.95
LINC00640-203ENST00000556479 NPDC1Q9NQX5 325 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms