RNA–Protein interactions for RNA: ENST00000556305.1

CDKN3-210, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 3

Gene CDKN3, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-210ENST00000556305 GOLGA2Q08379 1002 aa9.69□□□□□ -0.86
CDKN3-210ENST00000556305 SOX12O15370 315 aa9.68□□□□□ -0.86
CDKN3-210ENST00000556305 NLRP6P59044 892 aa9.68□□□□□ -0.86
CDKN3-210ENST00000556305 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
CDKN3-210ENST00000556305 MFRPQ9BY79 579 aa9.65□□□□□ -0.86
CDKN3-210ENST00000556305 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
CDKN3-210ENST00000556305 POTEB3A0JP26 581 aa9.64□□□□□ -0.87
CDKN3-210ENST00000556305 EMP3P54852 163 aa9.64□□□□□ -0.87
CDKN3-210ENST00000556305 POTEBQ6S5H4 581 aa9.64□□□□□ -0.87
CDKN3-210ENST00000556305 EFCAB3Q8N7B9 438 aa9.64□□□□□ -0.87
CDKN3-210ENST00000556305 P3H3Q8IVL6 736 aa9.63□□□□□ -0.87
CDKN3-210ENST00000556305 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
CDKN3-210ENST00000556305 HS3ST6Q96QI5 342 aa9.62□□□□□ -0.87
CDKN3-210ENST00000556305 MKRN3Q13064 507 aaKnown RBP9.59□□□□□ -0.87
CDKN3-210ENST00000556305 PHF8Q9UPP1 1060 aa9.58□□□□□ -0.88
CDKN3-210ENST00000556305 FBXO22Q8NEZ5 403 aa9.57□□□□□ -0.88
CDKN3-210ENST00000556305 C3orf67Q6ZVT6 689 aa9.56□□□□□ -0.88
CDKN3-210ENST00000556305 FAM205CA6NFA0 338 aa9.55□□□□□ -0.88
CDKN3-210ENST00000556305 TPRNQ4KMQ1 711 aa9.51□□□□□ -0.89
CDKN3-210ENST00000556305 CADPS2Q86UW7 1296 aa9.51□□□□□ -0.89
CDKN3-210ENST00000556305 L3MBTL3Q96JM7 780 aaPredicted RBP9.51□□□□□ -0.89
CDKN3-210ENST00000556305 PPP1R37O75864 691 aa9.5□□□□□ -0.89
CDKN3-210ENST00000556305 ILDR1Q86SU0 546 aaPredicted RBP9.47□□□□□ -0.89
CDKN3-210ENST00000556305 PDE4AP27815 886 aa9.46□□□□□ -0.9
CDKN3-210ENST00000556305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDKN3-210ENST00000556305 TULP1O00294 542 aaPredicted RBP9.45□□□□□ -0.9
CDKN3-210ENST00000556305 PRKCSHP14314 528 aaPredicted RBP9.45□□□□□ -0.9
CDKN3-210ENST00000556305 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
CDKN3-210ENST00000556305 KCNV2Q8TDN2 545 aa9.44□□□□□ -0.9
CDKN3-210ENST00000556305 MS4A4AQ96JQ5 239 aa9.44□□□□□ -0.9
CDKN3-210ENST00000556305 E2F4Q16254 413 aa9.43□□□□□ -0.9
CDKN3-210ENST00000556305 RNF166Q96A37 237 aaPredicted RBP9.42□□□□□ -0.9
CDKN3-210ENST00000556305 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
CDKN3-210ENST00000556305 ARHGEF1Q92888 912 aaKnown RBP9.41□□□□□ -0.9
CDKN3-210ENST00000556305 LARP6Q9BRS8 491 aaKnown RBP9.4□□□□□ -0.9
CDKN3-210ENST00000556305 G3V3G9 751 aa9.39□□□□□ -0.91
CDKN3-210ENST00000556305 DDX27Q96GQ7 796 aaKnown RBP9.39□□□□□ -0.91
CDKN3-210ENST00000556305 NCKAP5LQ9HCH0 1330 aa9.36□□□□□ -0.91
CDKN3-210ENST00000556305 MFSD10Q14728 455 aa9.36□□□□□ -0.91
CDKN3-210ENST00000556305 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
CDKN3-210ENST00000556305 ERBB3P21860 1342 aa9.33□□□□□ -0.92
CDKN3-210ENST00000556305 DPY19L2Q6NUT2 758 aa9.33□□□□□ -0.92
CDKN3-210ENST00000556305 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
CDKN3-210ENST00000556305 ZNF710Q8N1W2 664 aa9.31□□□□□ -0.92
CDKN3-210ENST00000556305 TMC2Q8TDI7 906 aa9.31□□□□□ -0.92
CDKN3-210ENST00000556305 GPHNQ9NQX3 736 aaPredicted RBP9.31□□□□□ -0.92
CDKN3-210ENST00000556305 BOLA1Q9Y3E2 137 aa9.31□□□□□ -0.92
CDKN3-210ENST00000556305 DOK7Q18PE1 504 aa9.3□□□□□ -0.92
CDKN3-210ENST00000556305 SMYD5Q6GMV2 418 aa9.3□□□□□ -0.92
CDKN3-210ENST00000556305 MICALL2Q8IY33 904 aa9.3□□□□□ -0.92
CDKN3-210ENST00000556305 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
CDKN3-210ENST00000556305 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
CDKN3-210ENST00000556305 LMOD2Q6P5Q4 547 aa9.28□□□□□ -0.92
CDKN3-210ENST00000556305 CAMK2BQ13554 666 aa9.27□□□□□ -0.93
CDKN3-210ENST00000556305 ARIH1Q9Y4X5 557 aaPredicted RBP9.27□□□□□ -0.93
CDKN3-210ENST00000556305 PTGER2P43116 358 aa9.26□□□□□ -0.93
CDKN3-210ENST00000556305 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDKN3-210ENST00000556305 ZNF687Q8N1G0 1237 aa9.25□□□□□ -0.93
CDKN3-210ENST00000556305 TESPA1A2RU30 521 aaPredicted RBP9.23□□□□□ -0.93
CDKN3-210ENST00000556305 RIMBP2O15034 1052 aa9.22□□□□□ -0.93
CDKN3-210ENST00000556305 SEMA3EO15041 775 aa9.22□□□□□ -0.93
CDKN3-210ENST00000556305 ZSWIM6Q9HCJ5 1215 aa9.22□□□□□ -0.93
CDKN3-210ENST00000556305 FOXK1P85037 733 aa9.21□□□□□ -0.94
CDKN3-210ENST00000556305 DSG2Q14126 1118 aa9.2□□□□□ -0.94
CDKN3-210ENST00000556305 SPDYE16A6NNV3 312 aaPredicted RBP9.19□□□□□ -0.94
CDKN3-210ENST00000556305 GPR153Q6NV75 609 aa9.17□□□□□ -0.94
CDKN3-210ENST00000556305 PLPP6Q8IY26 295 aa9.17□□□□□ -0.94
CDKN3-210ENST00000556305 C2orf72A6NCS6 295 aa9.16□□□□□ -0.94
CDKN3-210ENST00000556305 DPYSL4O14531 572 aa9.14□□□□□ -0.95
CDKN3-210ENST00000556305 TMEM92Q6UXU6 159 aa9.14□□□□□ -0.95
CDKN3-210ENST00000556305 KIF3CO14782 793 aa9.13□□□□□ -0.95
CDKN3-210ENST00000556305 PDIA6Q15084 440 aa9.13□□□□□ -0.95
CDKN3-210ENST00000556305 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
CDKN3-210ENST00000556305 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
CDKN3-210ENST00000556305 EMILIN3Q9NT22 766 aa9.12□□□□□ -0.95
CDKN3-210ENST00000556305 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
CDKN3-210ENST00000556305 TBC1D12O60347 775 aa9.08□□□□□ -0.96
CDKN3-210ENST00000556305 GPIHBP1Q8IV16 184 aa9.08□□□□□ -0.96
CDKN3-210ENST00000556305 LSM11P83369 360 aaKnown RBP eCLIP9.07□□□□□ -0.96
CDKN3-210ENST00000556305 ANKRD13DQ6ZTN6 518 aa9.07□□□□□ -0.96
CDKN3-210ENST00000556305 MLLT3P42568 568 aaPredicted RBP9.06□□□□□ -0.96
CDKN3-210ENST00000556305 UPF1Q92900 1129 aaKnown RBP eCLIP9.05□□□□□ -0.96
CDKN3-210ENST00000556305 PLA2G2EQ9NZK7 142 aa9.04□□□□□ -0.96
CDKN3-210ENST00000556305 ZMYND10O75800 440 aa9.03□□□□□ -0.96
CDKN3-210ENST00000556305 OXER1Q8TDS5 423 aa9.03□□□□□ -0.96
CDKN3-210ENST00000556305 ARSIQ5FYB1 569 aa9.02□□□□□ -0.97
CDKN3-210ENST00000556305 RBM26Q5T8P6 1007 aaKnown RBP9.02□□□□□ -0.97
CDKN3-210ENST00000556305 GRXCR2A6NFK2 248 aa9.01□□□□□ -0.97
CDKN3-210ENST00000556305 BARGINQ6ZT62 677 aa9□□□□□ -0.97
CDKN3-210ENST00000556305 KRI1Q8N9T8 703 aaKnown RBP9□□□□□ -0.97
CDKN3-210ENST00000556305 SLC24A3Q9HC58 644 aa9□□□□□ -0.97
CDKN3-210ENST00000556305 EVI5O60447 810 aa8.98□□□□□ -0.97
CDKN3-210ENST00000556305 PBX2P40425 430 aa8.98□□□□□ -0.97
CDKN3-210ENST00000556305 PTCD2Q8WV60 388 aaKnown RBP8.98□□□□□ -0.97
CDKN3-210ENST00000556305 SLC34A2O95436 690 aa8.97□□□□□ -0.97
CDKN3-210ENST00000556305 TMEM132AQ24JP5 1023 aa8.97□□□□□ -0.97
CDKN3-210ENST00000556305 KHSRPQ92945 711 aaKnown RBP eCLIP8.97□□□□□ -0.97
CDKN3-210ENST00000556305 HCSTQ9UBK5 93 aa8.97□□□□□ -0.97
CDKN3-210ENST00000556305 NUTM2FA1L443 756 aa8.96□□□□□ -0.98
CDKN3-210ENST00000556305 NEUROD2Q15784 382 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms