RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 TROQ12816 1431 aaPredicted RBP30.9■■■□□ 2.54
CDKN3-209ENST00000556102 POGZQ7Z3K3 1410 aa30.9■■■□□ 2.54
CDKN3-209ENST00000556102 YEATS2Q9ULM3 1422 aa30.89■■■□□ 2.53
CDKN3-209ENST00000556102 EFCAB2Q5VUJ9 269 aa30.86■■■□□ 2.53
CDKN3-209ENST00000556102 CLIP1P30622 1438 aa30.86■■■□□ 2.53
CDKN3-209ENST00000556102 RIMS1Q86UR5 1692 aaKnown RBP30.84■■■□□ 2.53
CDKN3-209ENST00000556102 ILDR1Q86SU0 546 aaPredicted RBP30.84■■■□□ 2.53
CDKN3-209ENST00000556102 SIGLEC1Q9BZZ2 1709 aa30.83■■■□□ 2.53
CDKN3-209ENST00000556102 PCF11O94913 1555 aaKnown RBP30.8■■■□□ 2.52
CDKN3-209ENST00000556102 CASKIN1Q8WXD9 1431 aa30.8■■■□□ 2.52
CDKN3-209ENST00000556102 ARHGAP5Q13017 1502 aa30.78■■■□□ 2.52
CDKN3-209ENST00000556102 CCDC18Q5T9S5 1454 aa30.78■■■□□ 2.52
CDKN3-209ENST00000556102 ATP10AO60312 1499 aa30.73■■■□□ 2.51
CDKN3-209ENST00000556102 ZNF518AQ6AHZ1 1483 aa30.73■■■□□ 2.51
CDKN3-209ENST00000556102 CDC42BPBQ9Y5S2 1711 aa30.73■■■□□ 2.51
CDKN3-209ENST00000556102 C9orf84Q5VXU9 1444 aa30.71■■■□□ 2.51
CDKN3-209ENST00000556102 LMTK3Q96Q04 1460 aa30.7■■■□□ 2.51
CDKN3-209ENST00000556102 FER1L4A9Z1Z3 1794 aa30.7■■■□□ 2.51
CDKN3-209ENST00000556102 KDM5CP41229 1560 aa30.7■■■□□ 2.5
CDKN3-209ENST00000556102 FYCO1Q9BQS8 1478 aa30.69■■■□□ 2.5
CDKN3-209ENST00000556102 PREX2Q70Z35 1606 aa30.69■■■□□ 2.5
CDKN3-209ENST00000556102 MLECQ14165 292 aa30.67■■■□□ 2.5
CDKN3-209ENST00000556102 AFAP1Q8N556 730 aa30.64■■■□□ 2.5
CDKN3-209ENST00000556102 ARHGEF12Q9NZN5 1544 aa30.63■■■□□ 2.49
CDKN3-209ENST00000556102 ABCC1P33527 1531 aa30.6■■■□□ 2.49
CDKN3-209ENST00000556102 PLPPR3Q6T4P5 718 aa30.6■■■□□ 2.49
CDKN3-209ENST00000556102 CDC42BPAQ5VT25 1732 aa30.59■■■□□ 2.49
CDKN3-209ENST00000556102 DIP2CQ9Y2E4 1556 aa30.58■■■□□ 2.49
CDKN3-209ENST00000556102 ITSN2Q9NZM3 1697 aa30.58■■■□□ 2.49
CDKN3-209ENST00000556102 MLH3Q9UHC1 1453 aa30.57■■■□□ 2.48
CDKN3-209ENST00000556102 MYT1LQ9UL68 1186 aa30.56■■■□□ 2.48
CDKN3-209ENST00000556102 REREQ9P2R6 1566 aa30.56■■■□□ 2.48
CDKN3-209ENST00000556102 TRAPPC8Q9Y2L5 1435 aa30.54■■■□□ 2.48
CDKN3-209ENST00000556102 ABCA6Q8N139 1617 aa30.54■■■□□ 2.48
CDKN3-209ENST00000556102 HSPA2P54652 639 aa30.49■■■□□ 2.47
CDKN3-209ENST00000556102 KIDINS220Q9ULH0 1771 aa30.46■■■□□ 2.47
CDKN3-209ENST00000556102 GPATCH8Q9UKJ3 1502 aaKnown RBP30.45■■■□□ 2.47
CDKN3-209ENST00000556102 SAMD9LQ8IVG5 1584 aa30.45■■■□□ 2.46
CDKN3-209ENST00000556102 AGLP35573 1532 aa30.44■■■□□ 2.46
CDKN3-209ENST00000556102 PREX1Q8TCU6 1659 aa30.44■■■□□ 2.46
CDKN3-209ENST00000556102 FBXO41Q8TF61 875 aa30.42■■■□□ 2.46
CDKN3-209ENST00000556102 CEBPAP49715 358 aaPredicted RBP30.4■■■□□ 2.46
CDKN3-209ENST00000556102 ZNF777Q9ULD5 760 aaPredicted RBP30.4■■■□□ 2.46
CDKN3-209ENST00000556102 SYCP2Q9BX26 1530 aa30.4■■■□□ 2.46
CDKN3-209ENST00000556102 SETD1BQ9UPS6 1966 aaKnown RBP30.37■■■□□ 2.45
CDKN3-209ENST00000556102 MTUS2Q5JR59 1369 aa30.37■■■□□ 2.45
CDKN3-209ENST00000556102 CCNB3Q8WWL7 1395 aa30.35■■■□□ 2.45
CDKN3-209ENST00000556102 PLEKHH2Q8IVE3 1493 aa30.34■■■□□ 2.45
CDKN3-209ENST00000556102 C3P01024 1663 aa30.33■■■□□ 2.45
CDKN3-209ENST00000556102 KIAA1107Q9UPP5 1409 aa30.33■■■□□ 2.45
CDKN3-209ENST00000556102 CFDP1Q9UEE9 299 aaPredicted RBP30.32■■■□□ 2.44
CDKN3-209ENST00000556102 SPAG9O60271 1321 aaKnown RBP30.31■■■□□ 2.44
CDKN3-209ENST00000556102 HNRNPMP52272 730 aaKnown RBP eCLIP30.31■■■□□ 2.44
CDKN3-209ENST00000556102 CEP162Q5TB80 1403 aa30.3■■■□□ 2.44
CDKN3-209ENST00000556102 ESF1Q9H501 851 aaKnown RBP30.3■■■□□ 2.44
CDKN3-209ENST00000556102 UHRF1BP1Q6BDS2 1440 aa30.3■■■□□ 2.44
CDKN3-209ENST00000556102 EHBP1L1Q8N3D4 1523 aa30.29■■■□□ 2.44
CDKN3-209ENST00000556102 ATP7AQ04656 1500 aa30.27■■■□□ 2.44
CDKN3-209ENST00000556102 CNTLNQ9NXG0 1405 aa30.27■■■□□ 2.44
CDKN3-209ENST00000556102 TIAM1Q13009 1591 aa30.26■■■□□ 2.43
CDKN3-209ENST00000556102 INO80Q9ULG1 1556 aaPredicted RBP30.26■■■□□ 2.43
CDKN3-209ENST00000556102 SUPT6HQ7KZ85 1726 aaKnown RBP30.23■■■□□ 2.43
CDKN3-209ENST00000556102 STRCQ7RTU9 1775 aa30.2■■■□□ 2.43
CDKN3-209ENST00000556102 PLXNC1O60486 1568 aa30.2■■■□□ 2.43
CDKN3-209ENST00000556102 MROH2AA6NES4 1674 aa30.2■■■□□ 2.42
CDKN3-209ENST00000556102 A2MP01023 1474 aa30.18■■■□□ 2.42
CDKN3-209ENST00000556102 DMRT2Q9Y5R5 561 aa30.14■■■□□ 2.42
CDKN3-209ENST00000556102 ZNF644Q9H582 1327 aaPredicted RBP30.14■■■□□ 2.42
CDKN3-209ENST00000556102 ADGBQ8N7X0 1667 aa30.14■■■□□ 2.41
CDKN3-209ENST00000556102 MBD5Q9P267 1494 aa30.13■■■□□ 2.41
CDKN3-209ENST00000556102 CERKQ8TCT0 537 aa30.13■■■□□ 2.41
CDKN3-209ENST00000556102 NPATQ14207 1427 aa30.11■■■□□ 2.41
CDKN3-209ENST00000556102 CLTCQ00610 1675 aaKnown RBP30.09■■■□□ 2.41
CDKN3-209ENST00000556102 ZMYM3Q14202 1370 aa30.09■■■□□ 2.41
CDKN3-209ENST00000556102 NCOA2Q15596 1464 aa30.08■■■□□ 2.41
CDKN3-209ENST00000556102 RTEL1-TNFRSF6BF6WH68 1400 aa30.07■■■□□ 2.4
CDKN3-209ENST00000556102 PTPRTO14522 1441 aa30.05■■■□□ 2.4
CDKN3-209ENST00000556102 GGT6Q6P531 493 aa30.03■■■□□ 2.4
CDKN3-209ENST00000556102 CAMSAP2Q08AD1 1489 aa30.01■■■□□ 2.4
CDKN3-209ENST00000556102 CCDC141Q6ZP82 1450 aa30■■■□□ 2.39
CDKN3-209ENST00000556102 NCOA1Q15788 1441 aa30■■■□□ 2.39
CDKN3-209ENST00000556102 VPS8Q8N3P4 1428 aa30■■■□□ 2.39
CDKN3-209ENST00000556102 PPP6R1Q9UPN7 881 aa30■■■□□ 2.39
CDKN3-209ENST00000556102 DHX29Q7Z478 1369 aaKnown RBP29.97■■■□□ 2.39
CDKN3-209ENST00000556102 PTPRKQ15262 1439 aa29.96■■■□□ 2.39
CDKN3-209ENST00000556102 LOC105371045A0A1W2PR82 267 aa29.96■■■□□ 2.39
CDKN3-209ENST00000556102 CAMSAP1Q5T5Y3 1602 aa29.96■■■□□ 2.39
CDKN3-209ENST00000556102 MYO3AQ8NEV4 1616 aa29.96■■■□□ 2.39
CDKN3-209ENST00000556102 ZNF142P52746 1687 aaPredicted RBP29.95■■■□□ 2.39
CDKN3-209ENST00000556102 RSPH4AQ5TD94 716 aa29.95■■■□□ 2.39
CDKN3-209ENST00000556102 LRRC9Q6ZRR7 1453 aa29.93■■■□□ 2.38
CDKN3-209ENST00000556102 ARHGEF5Q12774 1597 aa29.92■■■□□ 2.38
CDKN3-209ENST00000556102 CEP170BQ9Y4F5 1589 aaPredicted RBP29.9■■■□□ 2.38
CDKN3-209ENST00000556102 MAP3K1Q13233 1512 aa29.87■■■□□ 2.37
CDKN3-209ENST00000556102 FAM135AQ9P2D6 1515 aa29.86■■■□□ 2.37
CDKN3-209ENST00000556102 KIF3BO15066 747 aa29.86■■■□□ 2.37
CDKN3-209ENST00000556102 PLA2R1Q13018 1463 aa29.86■■■□□ 2.37
CDKN3-209ENST00000556102 LTBP4Q8N2S1 1624 aa29.85■■■□□ 2.37
CDKN3-209ENST00000556102 KDM5DQ9BY66 1539 aa29.83■■■□□ 2.37
CDKN3-209ENST00000556102 TSPY4P0CV99 314 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms