RNA–Protein interactions for RNA: ENST00000556078.1

EFCAB11-210, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-210ENST00000556078 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
EFCAB11-210ENST00000556078 MICALL2Q8IY33 904 aa9.49□□□□□ -0.89
EFCAB11-210ENST00000556078 ZNF316A6NFI3 1004 aaPredicted RBP9.48□□□□□ -0.89
EFCAB11-210ENST00000556078 HCSTQ9UBK5 93 aa9.48□□□□□ -0.89
EFCAB11-210ENST00000556078 KHSRPQ92945 711 aaKnown RBP eCLIP9.45□□□□□ -0.9
EFCAB11-210ENST00000556078 SOX12O15370 315 aa9.44□□□□□ -0.9
EFCAB11-210ENST00000556078 MS4A4AQ96JQ5 239 aa9.4□□□□□ -0.9
EFCAB11-210ENST00000556078 AXIN2Q9Y2T1 843 aa9.39□□□□□ -0.91
EFCAB11-210ENST00000556078 PBX2P40425 430 aa9.38□□□□□ -0.91
EFCAB11-210ENST00000556078 RIOK3O14730 519 aaKnown RBP9.36□□□□□ -0.91
EFCAB11-210ENST00000556078 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
EFCAB11-210ENST00000556078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.33□□□□□ -0.92
EFCAB11-210ENST00000556078 POTEEQ6S8J3 1075 aa9.33□□□□□ -0.92
EFCAB11-210ENST00000556078 ZFP91Q96JP5 570 aaPredicted RBP9.33□□□□□ -0.92
EFCAB11-210ENST00000556078 VGFO15240 615 aaPredicted RBP9.32□□□□□ -0.92
EFCAB11-210ENST00000556078 NUDT7P0C024 238 aa9.32□□□□□ -0.92
EFCAB11-210ENST00000556078 IRX2Q9BZI1 471 aaPredicted RBP9.32□□□□□ -0.92
EFCAB11-210ENST00000556078 RNF25Q96BH1 459 aaPredicted RBP9.31□□□□□ -0.92
EFCAB11-210ENST00000556078 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
EFCAB11-210ENST00000556078 LHX6Q9UPM6 363 aa9.29□□□□□ -0.92
EFCAB11-210ENST00000556078 NLRP6P59044 892 aa9.28□□□□□ -0.92
EFCAB11-210ENST00000556078 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
EFCAB11-210ENST00000556078 KIF3CO14782 793 aa9.25□□□□□ -0.93
EFCAB11-210ENST00000556078 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
EFCAB11-210ENST00000556078 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
EFCAB11-210ENST00000556078 SLC34A2O95436 690 aa9.23□□□□□ -0.93
EFCAB11-210ENST00000556078 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
EFCAB11-210ENST00000556078 C2orf72A6NCS6 295 aa9.19□□□□□ -0.94
EFCAB11-210ENST00000556078 RGS20O76081 388 aa9.19□□□□□ -0.94
EFCAB11-210ENST00000556078 STAC3Q96MF2 364 aa9.19□□□□□ -0.94
EFCAB11-210ENST00000556078 PCDHGA4Q9Y5G9 962 aa9.19□□□□□ -0.94
EFCAB11-210ENST00000556078 BCL11BQ9C0K0 894 aaPredicted RBP9.18□□□□□ -0.94
EFCAB11-210ENST00000556078 MFRPQ9BY79 579 aa9.17□□□□□ -0.94
EFCAB11-210ENST00000556078 TK2O00142 265 aa9.16□□□□□ -0.94
EFCAB11-210ENST00000556078 HRO43593 1189 aa9.16□□□□□ -0.94
EFCAB11-210ENST00000556078 PTPN5P54829 565 aa9.16□□□□□ -0.94
EFCAB11-210ENST00000556078 DMRTA1Q5VZB9 504 aa9.16□□□□□ -0.94
EFCAB11-210ENST00000556078 PSDA5PKW4 1024 aaPredicted RBP9.14□□□□□ -0.95
EFCAB11-210ENST00000556078 PSEN2P49810 448 aa9.14□□□□□ -0.95
EFCAB11-210ENST00000556078 STK24Q9Y6E0 443 aa9.13□□□□□ -0.95
EFCAB11-210ENST00000556078 Q6ZNB5 142 aa9.1□□□□□ -0.95
EFCAB11-210ENST00000556078 TMC2Q8TDI7 906 aa9.1□□□□□ -0.95
EFCAB11-210ENST00000556078 A0A0G2JS52 829 aa9.09□□□□□ -0.95
EFCAB11-210ENST00000556078 KDM4FA0A1W2PPD8 638 aa9.09□□□□□ -0.95
EFCAB11-210ENST00000556078 STK25O00506 426 aa9.07□□□□□ -0.96
EFCAB11-210ENST00000556078 IFFO2Q5TF58 517 aa9.07□□□□□ -0.96
EFCAB11-210ENST00000556078 PTCD2Q8WV60 388 aaKnown RBP9.05□□□□□ -0.96
EFCAB11-210ENST00000556078 PPP4R3BQ5MIZ7 849 aa9.01□□□□□ -0.97
EFCAB11-210ENST00000556078 KCNH8Q96L42 1107 aa9□□□□□ -0.97
EFCAB11-210ENST00000556078 KCNK17Q96T54 332 aa9□□□□□ -0.97
EFCAB11-210ENST00000556078 FOXK1P85037 733 aa8.97□□□□□ -0.97
EFCAB11-210ENST00000556078 THSD4Q6ZMP0 1018 aa8.97□□□□□ -0.97
EFCAB11-210ENST00000556078 VPS9D1Q9Y2B5 631 aa8.97□□□□□ -0.97
EFCAB11-210ENST00000556078 GOLGA8CPA6NN73 597 aa8.96□□□□□ -0.98
EFCAB11-210ENST00000556078 PPP1R37O75864 691 aa8.96□□□□□ -0.98
EFCAB11-210ENST00000556078 ECM2O94769 699 aaPredicted RBP8.95□□□□□ -0.98
EFCAB11-210ENST00000556078 TBC1D12O60347 775 aa8.94□□□□□ -0.98
EFCAB11-210ENST00000556078 PLPP6Q8IY26 295 aa8.93□□□□□ -0.98
EFCAB11-210ENST00000556078 WNT2BQ93097 391 aa8.93□□□□□ -0.98
EFCAB11-210ENST00000556078 GPHNQ9NQX3 736 aaPredicted RBP8.93□□□□□ -0.98
EFCAB11-210ENST00000556078 SLC4A5Q9BY07 1137 aa8.9□□□□□ -0.98
EFCAB11-210ENST00000556078 RGL2O15211 777 aa8.88□□□□□ -0.99
EFCAB11-210ENST00000556078 DSG2Q14126 1118 aa8.87□□□□□ -0.99
EFCAB11-210ENST00000556078 TRAF7Q6Q0C0 670 aa8.87□□□□□ -0.99
EFCAB11-210ENST00000556078 MRPL50Q8N5N7 158 aaKnown RBP8.87□□□□□ -0.99
EFCAB11-210ENST00000556078 BHMG1C9JSJ3 638 aaPredicted RBP8.85□□□□□ -0.99
EFCAB11-210ENST00000556078 PKD2Q13563 968 aa8.85□□□□□ -0.99
EFCAB11-210ENST00000556078 BCL2L12Q9HB09 334 aa8.85□□□□□ -0.99
EFCAB11-210ENST00000556078 LCE2BO14633 110 aa8.84□□□□□ -0.99
EFCAB11-210ENST00000556078 OXER1Q8TDS5 423 aa8.84□□□□□ -0.99
EFCAB11-210ENST00000556078 LAPTM4AQ15012 233 aa8.83□□□□□ -1
EFCAB11-210ENST00000556078 ZNF454Q8N9F8 522 aa8.81□□□□□ -1
EFCAB11-210ENST00000556078 GFRA3O60609 400 aa8.8□□□□□ -1
EFCAB11-210ENST00000556078 ITGBL1O95965 494 aaPredicted RBP8.8□□□□□ -1
EFCAB11-210ENST00000556078 FOSBP53539 338 aa8.79□□□□□ -1
EFCAB11-210ENST00000556078 ZBED2Q9BTP6 218 aa8.79□□□□□ -1
EFCAB11-210ENST00000556078 PTPREP23469 700 aa8.78□□□□□ -1
EFCAB11-210ENST00000556078 NBPF3Q9H094 633 aa8.78□□□□□ -1
EFCAB11-210ENST00000556078 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
EFCAB11-210ENST00000556078 HS6ST3Q8IZP7 471 aa8.75□□□□□ -1.01
EFCAB11-210ENST00000556078 UPF1Q92900 1129 aaKnown RBP eCLIP8.74□□□□□ -1.01
EFCAB11-210ENST00000556078 JPH4Q96JJ6 628 aa8.74□□□□□ -1.01
EFCAB11-210ENST00000556078 KCNC4Q03721 635 aa8.73□□□□□ -1.01
EFCAB11-210ENST00000556078 ZNF787Q6DD87 383 aa8.73□□□□□ -1.01
EFCAB11-210ENST00000556078 ANKK1Q8NFD2 765 aa8.73□□□□□ -1.01
EFCAB11-210ENST00000556078 CRISPLD2Q9H0B8 497 aa8.73□□□□□ -1.01
EFCAB11-210ENST00000556078 BCAMP50895 628 aa8.71□□□□□ -1.02
EFCAB11-210ENST00000556078 PPP1R15BQ5SWA1 713 aa8.7□□□□□ -1.02
EFCAB11-210ENST00000556078 ZDHHC16Q969W1 377 aa8.7□□□□□ -1.02
EFCAB11-210ENST00000556078 ADAM33Q9BZ11 813 aa8.69□□□□□ -1.02
EFCAB11-210ENST00000556078 ZNF775Q96BV0 537 aaPredicted RBP8.68□□□□□ -1.02
EFCAB11-210ENST00000556078 DNAJC5Q9H3Z4 198 aa8.68□□□□□ -1.02
EFCAB11-210ENST00000556078 NRG2O14511 850 aaPredicted RBP8.66□□□□□ -1.02
EFCAB11-210ENST00000556078 EVI5O60447 810 aa8.66□□□□□ -1.02
EFCAB11-210ENST00000556078 RYDENQ9NUL5 291 aaKnown RBP8.66□□□□□ -1.02
EFCAB11-210ENST00000556078 RABGEF1Q9UJ41 708 aa8.66□□□□□ -1.02
EFCAB11-210ENST00000556078 PPP1R3GB7ZBB8 358 aa8.65□□□□□ -1.02
EFCAB11-210ENST00000556078 NYAP1Q6ZVC0 841 aa8.65□□□□□ -1.02
EFCAB11-210ENST00000556078 WBP1LQ9NX94 342 aa8.64□□□□□ -1.03
EFCAB11-210ENST00000556078 SOWAHBA6NEL2 793 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms