RNA–Protein interactions for RNA: ENST00000556076.5

CHGA-204, Transcript of chromogranin A, humanhuman

TSL 5

Gene CHGA, Length 896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-204ENST00000556076 CDC42BPBQ9Y5S2 1711 aa26.19■■□□□ 1.78
CHGA-204ENST00000556076 ZMYM4Q5VZL5 1548 aa26.19■■□□□ 1.78
CHGA-204ENST00000556076 ARID4BQ4LE39 1312 aaPredicted RBP26.18■■□□□ 1.78
CHGA-204ENST00000556076 EFCAB2Q5VUJ9 269 aa26.18■■□□□ 1.78
CHGA-204ENST00000556076 POGZQ7Z3K3 1410 aa26.17■■□□□ 1.78
CHGA-204ENST00000556076 ADAMTSL3P82987 1691 aa26.17■■□□□ 1.78
CHGA-204ENST00000556076 BCORL1Q5H9F3 1711 aa26.16■■□□□ 1.78
CHGA-204ENST00000556076 ZFYVE16Q7Z3T8 1539 aa26.15■■□□□ 1.78
CHGA-204ENST00000556076 CEP162Q5TB80 1403 aa26.14■■□□□ 1.78
CHGA-204ENST00000556076 LOC105371045A0A1W2PR82 267 aa26.14■■□□□ 1.78
CHGA-204ENST00000556076 PREX2Q70Z35 1606 aa26.12■■□□□ 1.77
CHGA-204ENST00000556076 MADDQ8WXG6 1647 aa26.12■■□□□ 1.77
CHGA-204ENST00000556076 HECW2Q9P2P5 1572 aa26.12■■□□□ 1.77
CHGA-204ENST00000556076 CDC42BPAQ5VT25 1732 aa26.11■■□□□ 1.77
CHGA-204ENST00000556076 AFAP1Q8N556 730 aa26.08■■□□□ 1.77
CHGA-204ENST00000556076 PTPRMP28827 1452 aa26.07■■□□□ 1.76
CHGA-204ENST00000556076 ARHGEF12Q9NZN5 1544 aa26.06■■□□□ 1.76
CHGA-204ENST00000556076 MAGI2Q86UL8 1455 aa26.04■■□□□ 1.76
CHGA-204ENST00000556076 RIMS1Q86UR5 1692 aaKnown RBP26.04■■□□□ 1.76
CHGA-204ENST00000556076 MLECQ14165 292 aa26.03■■□□□ 1.76
CHGA-204ENST00000556076 ZNF518AQ6AHZ1 1483 aa26.02■■□□□ 1.76
CHGA-204ENST00000556076 ABCC1P33527 1531 aa26.02■■□□□ 1.76
CHGA-204ENST00000556076 KDM5CP41229 1560 aa26.01■■□□□ 1.75
CHGA-204ENST00000556076 TRAPPC8Q9Y2L5 1435 aa26.01■■□□□ 1.75
CHGA-204ENST00000556076 ITSN2Q9NZM3 1697 aa26■■□□□ 1.75
CHGA-204ENST00000556076 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
CHGA-204ENST00000556076 ZNF777Q9ULD5 760 aaPredicted RBP25.99■■□□□ 1.75
CHGA-204ENST00000556076 GPATCH8Q9UKJ3 1502 aaKnown RBP25.98■■□□□ 1.75
CHGA-204ENST00000556076 ATP10AO60312 1499 aa25.98■■□□□ 1.75
CHGA-204ENST00000556076 MYT1LQ9UL68 1186 aa25.97■■□□□ 1.75
CHGA-204ENST00000556076 SAMD9LQ8IVG5 1584 aa25.97■■□□□ 1.75
CHGA-204ENST00000556076 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
CHGA-204ENST00000556076 ABCA6Q8N139 1617 aa25.95■■□□□ 1.74
CHGA-204ENST00000556076 DIP2CQ9Y2E4 1556 aa25.95■■□□□ 1.74
CHGA-204ENST00000556076 C9orf84Q5VXU9 1444 aa25.94■■□□□ 1.74
CHGA-204ENST00000556076 SYCP2Q9BX26 1530 aa25.92■■□□□ 1.74
CHGA-204ENST00000556076 FER1L4A9Z1Z3 1794 aa25.92■■□□□ 1.74
CHGA-204ENST00000556076 CCNB3Q8WWL7 1395 aa25.91■■□□□ 1.74
CHGA-204ENST00000556076 HNRNPMP52272 730 aaKnown RBP eCLIP25.89■■□□□ 1.74
CHGA-204ENST00000556076 KIDINS220Q9ULH0 1771 aa25.89■■□□□ 1.73
CHGA-204ENST00000556076 TIAM1Q13009 1591 aa25.88■■□□□ 1.73
CHGA-204ENST00000556076 MLH3Q9UHC1 1453 aa25.88■■□□□ 1.73
CHGA-204ENST00000556076 EHBP1L1Q8N3D4 1523 aa25.88■■□□□ 1.73
CHGA-204ENST00000556076 CFDP1Q9UEE9 299 aaPredicted RBP25.87■■□□□ 1.73
CHGA-204ENST00000556076 ZNF644Q9H582 1327 aaPredicted RBP25.86■■□□□ 1.73
CHGA-204ENST00000556076 VPS8Q8N3P4 1428 aa25.81■■□□□ 1.72
CHGA-204ENST00000556076 LMTK3Q96Q04 1460 aa25.8■■□□□ 1.72
CHGA-204ENST00000556076 REREQ9P2R6 1566 aa25.79■■□□□ 1.72
CHGA-204ENST00000556076 CEBPAP49715 358 aaPredicted RBP25.79■■□□□ 1.72
CHGA-204ENST00000556076 SPAG9O60271 1321 aaKnown RBP25.77■■□□□ 1.72
CHGA-204ENST00000556076 NCOA2Q15596 1464 aa25.76■■□□□ 1.71
CHGA-204ENST00000556076 SUPT6HQ7KZ85 1726 aaKnown RBP25.75■■□□□ 1.71
CHGA-204ENST00000556076 HSPA2P54652 639 aa25.75■■□□□ 1.71
CHGA-204ENST00000556076 ATP7AQ04656 1500 aa25.74■■□□□ 1.71
CHGA-204ENST00000556076 KIAA1107Q9UPP5 1409 aa25.74■■□□□ 1.71
CHGA-204ENST00000556076 INO80Q9ULG1 1556 aaPredicted RBP25.73■■□□□ 1.71
CHGA-204ENST00000556076 PLEKHH2Q8IVE3 1493 aa25.73■■□□□ 1.71
CHGA-204ENST00000556076 AGLP35573 1532 aa25.72■■□□□ 1.71
CHGA-204ENST00000556076 KANK4Q5T7N3 995 aaPredicted RBP25.71■■□□□ 1.71
CHGA-204ENST00000556076 MBD5Q9P267 1494 aa25.7■■□□□ 1.7
CHGA-204ENST00000556076 LRRC9Q6ZRR7 1453 aa25.69■■□□□ 1.7
CHGA-204ENST00000556076 CAMSAP2Q08AD1 1489 aa25.66■■□□□ 1.7
CHGA-204ENST00000556076 C3P01024 1663 aa25.65■■□□□ 1.7
CHGA-204ENST00000556076 PLXNC1O60486 1568 aa25.62■■□□□ 1.69
CHGA-204ENST00000556076 A2MP01023 1474 aa25.62■■□□□ 1.69
CHGA-204ENST00000556076 PREX1Q8TCU6 1659 aa25.61■■□□□ 1.69
CHGA-204ENST00000556076 ILDR1Q86SU0 546 aaPredicted RBP25.61■■□□□ 1.69
CHGA-204ENST00000556076 ESF1Q9H501 851 aaKnown RBP25.58■■□□□ 1.69
CHGA-204ENST00000556076 ADGBQ8N7X0 1667 aa25.58■■□□□ 1.68
CHGA-204ENST00000556076 MAP3K1Q13233 1512 aa25.57■■□□□ 1.68
CHGA-204ENST00000556076 CCDC141Q6ZP82 1450 aa25.56■■□□□ 1.68
CHGA-204ENST00000556076 CLTCQ00610 1675 aaKnown RBP25.55■■□□□ 1.68
CHGA-204ENST00000556076 GGT6Q6P531 493 aa25.54■■□□□ 1.68
CHGA-204ENST00000556076 RTEL1-TNFRSF6BF6WH68 1400 aa25.51■■□□□ 1.67
CHGA-204ENST00000556076 SETD1BQ9UPS6 1966 aaKnown RBP25.49■■□□□ 1.67
CHGA-204ENST00000556076 MROH2AA6NES4 1674 aa25.49■■□□□ 1.67
CHGA-204ENST00000556076 ARHGEF5Q12774 1597 aa25.49■■□□□ 1.67
CHGA-204ENST00000556076 UHRF1BP1Q6BDS2 1440 aa25.49■■□□□ 1.67
CHGA-204ENST00000556076 CNTLNQ9NXG0 1405 aa25.49■■□□□ 1.67
CHGA-204ENST00000556076 MYOM3Q5VTT5 1437 aa25.48■■□□□ 1.67
CHGA-204ENST00000556076 ZMYM3Q14202 1370 aa25.47■■□□□ 1.67
CHGA-204ENST00000556076 DHX29Q7Z478 1369 aaKnown RBP25.47■■□□□ 1.67
CHGA-204ENST00000556076 STRCQ7RTU9 1775 aa25.46■■□□□ 1.67
CHGA-204ENST00000556076 KIF3BO15066 747 aa25.43■■□□□ 1.66
CHGA-204ENST00000556076 APLP2Q06481 763 aa25.43■■□□□ 1.66
CHGA-204ENST00000556076 RSPH4AQ5TD94 716 aa25.4■■□□□ 1.66
CHGA-204ENST00000556076 MIA2Q96PC5 1412 aa25.39■■□□□ 1.66
CHGA-204ENST00000556076 TSPY4P0CV99 314 aa25.39■■□□□ 1.66
CHGA-204ENST00000556076 TSPY10P0CW01 314 aa25.39■■□□□ 1.66
CHGA-204ENST00000556076 PTPRKQ15262 1439 aa25.37■■□□□ 1.65
CHGA-204ENST00000556076 NPATQ14207 1427 aa25.37■■□□□ 1.65
CHGA-204ENST00000556076 MAST1Q9Y2H9 1570 aa25.36■■□□□ 1.65
CHGA-204ENST00000556076 PTPN23Q9H3S7 1636 aa25.36■■□□□ 1.65
CHGA-204ENST00000556076 MYO3AQ8NEV4 1616 aa25.34■■□□□ 1.65
CHGA-204ENST00000556076 FBXO31Q5XUX0 539 aaPredicted RBP25.31■■□□□ 1.64
CHGA-204ENST00000556076 CROCC2H7BZ55 1655 aa25.31■■□□□ 1.64
CHGA-204ENST00000556076 FGD6Q6ZV73 1430 aa25.3■■□□□ 1.64
CHGA-204ENST00000556076 ABCC5O15440 1437 aa25.29■■□□□ 1.64
CHGA-204ENST00000556076 KDM5DQ9BY66 1539 aa25.29■■□□□ 1.64
CHGA-204ENST00000556076 PPP6R1Q9UPN7 881 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms