RNA–Protein interactions for RNA: ENST00000555984.1

NIN-218, Transcript of ninein, humanhuman

TSL 2

Gene NIN, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-218ENST00000555984 FBXO22Q8NEZ5 403 aa8.44□□□□□ -1.06
NIN-218ENST00000555984 NLRP6P59044 892 aa8.43□□□□□ -1.06
NIN-218ENST00000555984 RYDENQ9NUL5 291 aaKnown RBP8.43□□□□□ -1.06
NIN-218ENST00000555984 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.43□□□□□ -1.06
NIN-218ENST00000555984 CDAN1Q8IWY9 1227 aa8.42□□□□□ -1.06
NIN-218ENST00000555984 BCANQ96GW7 911 aa8.4□□□□□ -1.06
NIN-218ENST00000555984 TMEM121BQ9BXQ6 578 aaPredicted RBP8.39□□□□□ -1.07
NIN-218ENST00000555984 ST18O60284 1047 aa8.38□□□□□ -1.07
NIN-218ENST00000555984 L3MBTL3Q96JM7 780 aaPredicted RBP8.38□□□□□ -1.07
NIN-218ENST00000555984 BOLA1Q9Y3E2 137 aa8.38□□□□□ -1.07
NIN-218ENST00000555984 G3V3G9 751 aa8.36□□□□□ -1.07
NIN-218ENST00000555984 PPP1R37O75864 691 aa8.36□□□□□ -1.07
NIN-218ENST00000555984 C3orf67Q6ZVT6 689 aa8.36□□□□□ -1.07
NIN-218ENST00000555984 MICALL2Q8IY33 904 aa8.35□□□□□ -1.07
NIN-218ENST00000555984 CADPS2Q86UW7 1296 aa8.28□□□□□ -1.08
NIN-218ENST00000555984 TMEM92Q6UXU6 159 aa8.26□□□□□ -1.09
NIN-218ENST00000555984 NBR1Q14596 966 aa8.24□□□□□ -1.09
NIN-218ENST00000555984 WDR70Q9NW82 654 aa8.24□□□□□ -1.09
NIN-218ENST00000555984 EMP3P54852 163 aa8.23□□□□□ -1.09
NIN-218ENST00000555984 MARVELD3Q96A59 401 aa8.22□□□□□ -1.09
NIN-218ENST00000555984 PRKCSHP14314 528 aaPredicted RBP8.2□□□□□ -1.1
NIN-218ENST00000555984 C2orf72A6NCS6 295 aa8.19□□□□□ -1.1
NIN-218ENST00000555984 SPNS2Q8IVW8 549 aa8.19□□□□□ -1.1
NIN-218ENST00000555984 MMRN1Q13201 1228 aa8.18□□□□□ -1.1
NIN-218ENST00000555984 KIF3CO14782 793 aa8.17□□□□□ -1.1
NIN-218ENST00000555984 TMC2Q8TDI7 906 aa8.17□□□□□ -1.1
NIN-218ENST00000555984 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
NIN-218ENST00000555984 TPRNQ4KMQ1 711 aa8.15□□□□□ -1.1
NIN-218ENST00000555984 P3H3Q8IVL6 736 aa8.15□□□□□ -1.1
NIN-218ENST00000555984 NCKAP5LQ9HCH0 1330 aa8.14□□□□□ -1.11
NIN-218ENST00000555984 FAM205CA6NFA0 338 aa8.14□□□□□ -1.11
NIN-218ENST00000555984 RIMBP2O15034 1052 aa8.14□□□□□ -1.11
NIN-218ENST00000555984 DOK7Q18PE1 504 aa8.13□□□□□ -1.11
NIN-218ENST00000555984 KCNV2Q8TDN2 545 aa8.13□□□□□ -1.11
NIN-218ENST00000555984 LARP6Q9BRS8 491 aaKnown RBP8.13□□□□□ -1.11
NIN-218ENST00000555984 HOXB3P14651 431 aaPredicted RBP8.12□□□□□ -1.11
NIN-218ENST00000555984 PDE4AP27815 886 aa8.12□□□□□ -1.11
NIN-218ENST00000555984 HS3ST6Q96QI5 342 aa8.12□□□□□ -1.11
NIN-218ENST00000555984 CRISPLD2Q9H0B8 497 aa8.12□□□□□ -1.11
NIN-218ENST00000555984 GPHNQ9NQX3 736 aaPredicted RBP8.12□□□□□ -1.11
NIN-218ENST00000555984 DSG2Q14126 1118 aa8.11□□□□□ -1.11
NIN-218ENST00000555984 E2F4Q16254 413 aa8.1□□□□□ -1.11
NIN-218ENST00000555984 FOXK1P85037 733 aa8.08□□□□□ -1.12
NIN-218ENST00000555984 PPP1R15BQ5SWA1 713 aa8.08□□□□□ -1.12
NIN-218ENST00000555984 PLPP6Q8IY26 295 aa8.08□□□□□ -1.12
NIN-218ENST00000555984 ERBB3P21860 1342 aa8.06□□□□□ -1.12
NIN-218ENST00000555984 HOXB1P14653 301 aaPredicted RBP8.06□□□□□ -1.12
NIN-218ENST00000555984 DDX27Q96GQ7 796 aaKnown RBP8.06□□□□□ -1.12
NIN-218ENST00000555984 MFSD10Q14728 455 aa8.05□□□□□ -1.12
NIN-218ENST00000555984 ARHGEF1Q92888 912 aaKnown RBP8.05□□□□□ -1.12
NIN-218ENST00000555984 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
NIN-218ENST00000555984 ZSWIM6Q9HCJ5 1215 aa8.03□□□□□ -1.12
NIN-218ENST00000555984 ARSIQ5FYB1 569 aa8.02□□□□□ -1.13
NIN-218ENST00000555984 UPF1Q92900 1129 aaKnown RBP eCLIP8.02□□□□□ -1.13
NIN-218ENST00000555984 KRTAP3-3Q9BYR6 98 aa8.02□□□□□ -1.13
NIN-218ENST00000555984 KRTAP3-2Q9BYR7 98 aa8.02□□□□□ -1.13
NIN-218ENST00000555984 GPR153Q6NV75 609 aa8□□□□□ -1.13
NIN-218ENST00000555984 PCDHGA4Q9Y5G9 962 aa8□□□□□ -1.13
NIN-218ENST00000555984 POTEB3A0JP26 581 aa7.99□□□□□ -1.13
NIN-218ENST00000555984 SLC34A2O95436 690 aa7.99□□□□□ -1.13
NIN-218ENST00000555984 POTEBQ6S5H4 581 aa7.99□□□□□ -1.13
NIN-218ENST00000555984 SEMA3EO15041 775 aa7.98□□□□□ -1.13
NIN-218ENST00000555984 NUDT7P0C024 238 aa7.98□□□□□ -1.13
NIN-218ENST00000555984 CAMK2BQ13554 666 aa7.97□□□□□ -1.13
NIN-218ENST00000555984 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.97□□□□□ -1.13
NIN-218ENST00000555984 EMILIN3Q9NT22 766 aa7.97□□□□□ -1.13
NIN-218ENST00000555984 VARS2Q5ST30 1063 aaKnown RBP7.96□□□□□ -1.14
NIN-218ENST00000555984 OXER1Q8TDS5 423 aa7.96□□□□□ -1.14
NIN-218ENST00000555984 PTCD2Q8WV60 388 aaKnown RBP7.96□□□□□ -1.14
NIN-218ENST00000555984 TULP1O00294 542 aaPredicted RBP7.95□□□□□ -1.14
NIN-218ENST00000555984 LMOD2Q6P5Q4 547 aa7.95□□□□□ -1.14
NIN-218ENST00000555984 PTGER2P43116 358 aa7.94□□□□□ -1.14
NIN-218ENST00000555984 TESPA1A2RU30 521 aaPredicted RBP7.93□□□□□ -1.14
NIN-218ENST00000555984 RNF166Q96A37 237 aaPredicted RBP7.93□□□□□ -1.14
NIN-218ENST00000555984 ARIH1Q9Y4X5 557 aaPredicted RBP7.93□□□□□ -1.14
NIN-218ENST00000555984 DPYSL4O14531 572 aa7.92□□□□□ -1.14
NIN-218ENST00000555984 TBC1D12O60347 775 aa7.92□□□□□ -1.14
NIN-218ENST00000555984 ZNF687Q8N1G0 1237 aa7.92□□□□□ -1.14
NIN-218ENST00000555984 MYT1LQ9UL68 1186 aa7.92□□□□□ -1.14
NIN-218ENST00000555984 LHX6Q9UPM6 363 aa7.91□□□□□ -1.14
NIN-218ENST00000555984 ZNF316A6NFI3 1004 aaPredicted RBP7.9□□□□□ -1.14
NIN-218ENST00000555984 MAP3K9P80192 1104 aa7.9□□□□□ -1.14
NIN-218ENST00000555984 KDM4FA0A1W2PPD8 638 aa7.89□□□□□ -1.15
NIN-218ENST00000555984 SMYD5Q6GMV2 418 aa7.89□□□□□ -1.15
NIN-218ENST00000555984 EVI5O60447 810 aa7.88□□□□□ -1.15
NIN-218ENST00000555984 MLLT3P42568 568 aaPredicted RBP7.86□□□□□ -1.15
NIN-218ENST00000555984 SPDYE16A6NNV3 312 aaPredicted RBP7.85□□□□□ -1.15
NIN-218ENST00000555984 ANKRD13DQ6ZTN6 518 aa7.84□□□□□ -1.15
NIN-218ENST00000555984 ZC3H15Q8WU90 426 aaKnown RBP7.84□□□□□ -1.15
NIN-218ENST00000555984 PDIA6Q15084 440 aa7.83□□□□□ -1.16
NIN-218ENST00000555984 ZNF454Q8N9F8 522 aa7.83□□□□□ -1.16
NIN-218ENST00000555984 RBM26Q5T8P6 1007 aaKnown RBP7.82□□□□□ -1.16
NIN-218ENST00000555984 ANO8Q9HCE9 1232 aaPredicted RBP7.81□□□□□ -1.16
NIN-218ENST00000555984 PBX2P40425 430 aa7.8□□□□□ -1.16
NIN-218ENST00000555984 PPP4R3BQ5MIZ7 849 aa7.8□□□□□ -1.16
NIN-218ENST00000555984 DDX12PQ92771 950 aa7.8□□□□□ -1.16
NIN-218ENST00000555984 JPH4Q96JJ6 628 aa7.8□□□□□ -1.16
NIN-218ENST00000555984 PSDA5PKW4 1024 aaPredicted RBP7.79□□□□□ -1.16
NIN-218ENST00000555984 GRXCR2A6NFK2 248 aa7.79□□□□□ -1.16
NIN-218ENST00000555984 FOSBP53539 338 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms