RNA–Protein interactions for RNA: ENST00000555929.1

PCNX4-211, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-211ENST00000555929 ZCCHC11Q5TAX3 1644 aaKnown RBP11.79□□□□□ -0.52
PCNX4-211ENST00000555929 FAM69CQ0P6D2 419 aa11.79□□□□□ -0.52
PCNX4-211ENST00000555929 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
PCNX4-211ENST00000555929 POLA2Q14181 598 aa11.77□□□□□ -0.53
PCNX4-211ENST00000555929 RBM42Q9BTD8 480 aaKnown RBP11.76□□□□□ -0.53
PCNX4-211ENST00000555929 WDR7Q9Y4E6 1490 aa11.76□□□□□ -0.53
PCNX4-211ENST00000555929 TROQ12816 1431 aaPredicted RBP11.74□□□□□ -0.53
PCNX4-211ENST00000555929 MAPKBP1O60336 1514 aa11.73□□□□□ -0.53
PCNX4-211ENST00000555929 TIAM1Q13009 1591 aa11.73□□□□□ -0.53
PCNX4-211ENST00000555929 LRRIQ1Q96JM4 1722 aa11.72□□□□□ -0.53
PCNX4-211ENST00000555929 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
PCNX4-211ENST00000555929 MAGI3Q5TCQ9 1506 aa11.7□□□□□ -0.54
PCNX4-211ENST00000555929 MAP3K1Q13233 1512 aa11.7□□□□□ -0.54
PCNX4-211ENST00000555929 ABCC10Q5T3U5 1492 aa11.7□□□□□ -0.54
PCNX4-211ENST00000555929 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
PCNX4-211ENST00000555929 CCNB3Q8WWL7 1395 aa11.68□□□□□ -0.54
PCNX4-211ENST00000555929 EHBP1L1Q8N3D4 1523 aa11.68□□□□□ -0.54
PCNX4-211ENST00000555929 CD109Q6YHK3 1445 aa11.68□□□□□ -0.54
PCNX4-211ENST00000555929 CFAP43Q8NDM7 1665 aa11.67□□□□□ -0.54
PCNX4-211ENST00000555929 CFDP1Q9UEE9 299 aaPredicted RBP11.66□□□□□ -0.54
PCNX4-211ENST00000555929 NCOA2Q15596 1464 aa11.65□□□□□ -0.54
PCNX4-211ENST00000555929 KIF14Q15058 1648 aa11.65□□□□□ -0.54
PCNX4-211ENST00000555929 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.65□□□□□ -0.55
PCNX4-211ENST00000555929 DIP2BQ9P265 1576 aa11.64□□□□□ -0.55
PCNX4-211ENST00000555929 EFCAB2Q5VUJ9 269 aa11.63□□□□□ -0.55
PCNX4-211ENST00000555929 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
PCNX4-211ENST00000555929 PHLDB1Q86UU1 1377 aa11.62□□□□□ -0.55
PCNX4-211ENST00000555929 PLCH2O75038 1416 aa11.61□□□□□ -0.55
PCNX4-211ENST00000555929 SUPT6HQ7KZ85 1726 aaKnown RBP11.61□□□□□ -0.55
PCNX4-211ENST00000555929 FAM50AQ14320 339 aaKnown RBP11.61□□□□□ -0.55
PCNX4-211ENST00000555929 GLI2P10070 1586 aa11.61□□□□□ -0.55
PCNX4-211ENST00000555929 TTC37Q6PGP7 1564 aa11.61□□□□□ -0.55
PCNX4-211ENST00000555929 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
PCNX4-211ENST00000555929 ARHGAP5Q13017 1502 aa11.6□□□□□ -0.55
PCNX4-211ENST00000555929 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
PCNX4-211ENST00000555929 ZNF644Q9H582 1327 aaPredicted RBP11.6□□□□□ -0.55
PCNX4-211ENST00000555929 ABCA9Q8IUA7 1624 aa11.59□□□□□ -0.55
PCNX4-211ENST00000555929 MYOM3Q5VTT5 1437 aa11.59□□□□□ -0.55
PCNX4-211ENST00000555929 HNRNPMP52272 730 aaKnown RBP eCLIP11.58□□□□□ -0.56
PCNX4-211ENST00000555929 FANCAO15360 1455 aa11.57□□□□□ -0.56
PCNX4-211ENST00000555929 ITGAEP38570 1179 aa11.57□□□□□ -0.56
PCNX4-211ENST00000555929 MYT1LQ9UL68 1186 aa11.57□□□□□ -0.56
PCNX4-211ENST00000555929 TEX14Q8IWB6 1497 aa11.57□□□□□ -0.56
PCNX4-211ENST00000555929 KIF13AQ9H1H9 1805 aa11.56□□□□□ -0.56
PCNX4-211ENST00000555929 TSPOAP1O95153 1857 aa11.56□□□□□ -0.56
PCNX4-211ENST00000555929 AKNAQ7Z591 1439 aa11.56□□□□□ -0.56
PCNX4-211ENST00000555929 MAP3K4Q9Y6R4 1608 aa11.55□□□□□ -0.56
PCNX4-211ENST00000555929 FGD6Q6ZV73 1430 aa11.54□□□□□ -0.56
PCNX4-211ENST00000555929 ZBTB22O15209 634 aa11.54□□□□□ -0.56
PCNX4-211ENST00000555929 RAPGEF3O95398 923 aa11.54□□□□□ -0.56
PCNX4-211ENST00000555929 SCAPERQ9BY12 1400 aa11.53□□□□□ -0.56
PCNX4-211ENST00000555929 MYO5CQ9NQX4 1742 aa11.53□□□□□ -0.56
PCNX4-211ENST00000555929 AFAP1Q8N556 730 aa11.53□□□□□ -0.56
PCNX4-211ENST00000555929 MIA2Q96PC5 1412 aa11.52□□□□□ -0.56
PCNX4-211ENST00000555929 ADGRL1O94910 1474 aa11.52□□□□□ -0.56
PCNX4-211ENST00000555929 NEO1Q92859 1461 aa11.52□□□□□ -0.56
PCNX4-211ENST00000555929 PREX2Q70Z35 1606 aa11.51□□□□□ -0.57
PCNX4-211ENST00000555929 TSPY4P0CV99 314 aa11.51□□□□□ -0.57
PCNX4-211ENST00000555929 TSPY10P0CW01 314 aa11.51□□□□□ -0.57
PCNX4-211ENST00000555929 CHIC2Q9UKJ5 165 aa11.51□□□□□ -0.57
PCNX4-211ENST00000555929 CDC42BPAQ5VT25 1732 aa11.51□□□□□ -0.57
PCNX4-211ENST00000555929 CAMSAP2Q08AD1 1489 aa11.51□□□□□ -0.57
PCNX4-211ENST00000555929 ITSN2Q9NZM3 1697 aa11.5□□□□□ -0.57
PCNX4-211ENST00000555929 CDC42BPBQ9Y5S2 1711 aa11.5□□□□□ -0.57
PCNX4-211ENST00000555929 ARAP3Q8WWN8 1544 aa11.5□□□□□ -0.57
PCNX4-211ENST00000555929 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
PCNX4-211ENST00000555929 DENND4BO75064 1496 aaPredicted RBP11.49□□□□□ -0.57
PCNX4-211ENST00000555929 PLEKHH2Q8IVE3 1493 aa11.49□□□□□ -0.57
PCNX4-211ENST00000555929 PPRC1Q5VV67 1664 aaKnown RBP11.49□□□□□ -0.57
PCNX4-211ENST00000555929 RSPH4AQ5TD94 716 aa11.48□□□□□ -0.57
PCNX4-211ENST00000555929 TRAPPC8Q9Y2L5 1435 aa11.48□□□□□ -0.57
PCNX4-211ENST00000555929 PTPN23Q9H3S7 1636 aa11.48□□□□□ -0.57
PCNX4-211ENST00000555929 SAMD9LQ8IVG5 1584 aa11.47□□□□□ -0.57
PCNX4-211ENST00000555929 CFAP74Q9C0B2 1584 aa11.47□□□□□ -0.57
PCNX4-211ENST00000555929 SYCP2Q9BX26 1530 aa11.47□□□□□ -0.57
PCNX4-211ENST00000555929 ARHGEF12Q9NZN5 1544 aa11.47□□□□□ -0.57
PCNX4-211ENST00000555929 KIAA1107Q9UPP5 1409 aa11.47□□□□□ -0.57
PCNX4-211ENST00000555929 SPAG9O60271 1321 aaKnown RBP11.47□□□□□ -0.57
PCNX4-211ENST00000555929 COL17A1Q9UMD9 1497 aaPredicted RBP11.46□□□□□ -0.57
PCNX4-211ENST00000555929 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.57
PCNX4-211ENST00000555929 TCOF1Q13428 1488 aaKnown RBP11.45□□□□□ -0.58
PCNX4-211ENST00000555929 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
PCNX4-211ENST00000555929 ABCC1P33527 1531 aa11.45□□□□□ -0.58
PCNX4-211ENST00000555929 MBD5Q9P267 1494 aa11.44□□□□□ -0.58
PCNX4-211ENST00000555929 POGZQ7Z3K3 1410 aa11.44□□□□□ -0.58
PCNX4-211ENST00000555929 TRIM26Q12899 539 aaPredicted RBP11.44□□□□□ -0.58
PCNX4-211ENST00000555929 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
PCNX4-211ENST00000555929 KDM6BO15054 1643 aa11.43□□□□□ -0.58
PCNX4-211ENST00000555929 RRP7BPQ9NSQ0 103 aa11.43□□□□□ -0.58
PCNX4-211ENST00000555929 ZNF518AQ6AHZ1 1483 aa11.43□□□□□ -0.58
PCNX4-211ENST00000555929 CCDC141Q6ZP82 1450 aa11.43□□□□□ -0.58
PCNX4-211ENST00000555929 ABCC5O15440 1437 aa11.43□□□□□ -0.58
PCNX4-211ENST00000555929 DAPK1P53355 1430 aa11.43□□□□□ -0.58
PCNX4-211ENST00000555929 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.41□□□□□ -0.58
PCNX4-211ENST00000555929 C9orf84Q5VXU9 1444 aa11.4□□□□□ -0.58
PCNX4-211ENST00000555929 ARID4BQ4LE39 1312 aaPredicted RBP11.39□□□□□ -0.59
PCNX4-211ENST00000555929 PTPRKQ15262 1439 aa11.39□□□□□ -0.59
PCNX4-211ENST00000555929 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
PCNX4-211ENST00000555929 ANKRD30AQ9BXX3 1397 aa11.39□□□□□ -0.59
PCNX4-211ENST00000555929 ARHGEF5Q12774 1597 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms