RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ZMYM4Q5VZL5 1548 aa39.37■■■■□ 3.89
PRKCH-216ENST00000555542 POGZQ7Z3K3 1410 aa39.34■■■■□ 3.89
PRKCH-216ENST00000555542 ZFYVE16Q7Z3T8 1539 aa39.33■■■■□ 3.89
PRKCH-216ENST00000555542 CEP162Q5TB80 1403 aa39.31■■■■□ 3.88
PRKCH-216ENST00000555542 MAGI2Q86UL8 1455 aa39.29■■■■□ 3.88
PRKCH-216ENST00000555542 CDC42BPBQ9Y5S2 1711 aa39.28■■■■□ 3.88
PRKCH-216ENST00000555542 BCORL1Q5H9F3 1711 aa39.27■■■■□ 3.88
PRKCH-216ENST00000555542 PREX2Q70Z35 1606 aa39.26■■■■□ 3.88
PRKCH-216ENST00000555542 ADAMTSL3P82987 1691 aa39.25■■■■□ 3.87
PRKCH-216ENST00000555542 YEATS2Q9ULM3 1422 aa39.25■■■■□ 3.87
PRKCH-216ENST00000555542 ZNF518AQ6AHZ1 1483 aa39.2■■■■□ 3.87
PRKCH-216ENST00000555542 CDC42BPAQ5VT25 1732 aa39.18■■■■□ 3.86
PRKCH-216ENST00000555542 MYT1LQ9UL68 1186 aa39.17■■■■□ 3.86
PRKCH-216ENST00000555542 MADDQ8WXG6 1647 aa39.16■■■■□ 3.86
PRKCH-216ENST00000555542 HECW2Q9P2P5 1572 aa39.14■■■■□ 3.86
PRKCH-216ENST00000555542 PTPRMP28827 1452 aa39.14■■■■□ 3.86
PRKCH-216ENST00000555542 MTUS2Q5JR59 1369 aa39.14■■■■□ 3.86
PRKCH-216ENST00000555542 AFAP1Q8N556 730 aa39.12■■■■□ 3.85
PRKCH-216ENST00000555542 LOC105371045A0A1W2PR82 267 aa39.11■■■■□ 3.85
PRKCH-216ENST00000555542 ABCC1P33527 1531 aa39.09■■■■□ 3.85
PRKCH-216ENST00000555542 KDM5CP41229 1560 aa39.09■■■■□ 3.85
PRKCH-216ENST00000555542 SIGLEC1Q9BZZ2 1709 aa39.09■■■■□ 3.85
PRKCH-216ENST00000555542 ATP10AO60312 1499 aa39.08■■■■□ 3.85
PRKCH-216ENST00000555542 ZNF777Q9ULD5 760 aaPredicted RBP39.07■■■■□ 3.85
PRKCH-216ENST00000555542 RIMS1Q86UR5 1692 aaKnown RBP39.06■■■■□ 3.84
PRKCH-216ENST00000555542 ITSN2Q9NZM3 1697 aa39.06■■■■□ 3.84
PRKCH-216ENST00000555542 C9orf84Q5VXU9 1444 aa39.06■■■■□ 3.84
PRKCH-216ENST00000555542 MLECQ14165 292 aa39.04■■■■□ 3.84
PRKCH-216ENST00000555542 CCNB3Q8WWL7 1395 aa39.02■■■■□ 3.84
PRKCH-216ENST00000555542 GPATCH8Q9UKJ3 1502 aaKnown RBP39.02■■■■□ 3.84
PRKCH-216ENST00000555542 EHBP1L1Q8N3D4 1523 aa39■■■■□ 3.83
PRKCH-216ENST00000555542 ARHGEF12Q9NZN5 1544 aa39■■■■□ 3.83
PRKCH-216ENST00000555542 TRAPPC8Q9Y2L5 1435 aa39■■■■□ 3.83
PRKCH-216ENST00000555542 SAMD9LQ8IVG5 1584 aa38.97■■■■□ 3.83
PRKCH-216ENST00000555542 CFDP1Q9UEE9 299 aaPredicted RBP38.96■■■■□ 3.83
PRKCH-216ENST00000555542 MLH3Q9UHC1 1453 aa38.94■■■■□ 3.82
PRKCH-216ENST00000555542 PLPPR3Q6T4P5 718 aa38.94■■■■□ 3.82
PRKCH-216ENST00000555542 FER1L4A9Z1Z3 1794 aa38.94■■■■□ 3.82
PRKCH-216ENST00000555542 DIP2CQ9Y2E4 1556 aa38.94■■■■□ 3.82
PRKCH-216ENST00000555542 SYCP2Q9BX26 1530 aa38.92■■■■□ 3.82
PRKCH-216ENST00000555542 ABCA6Q8N139 1617 aa38.91■■■■□ 3.82
PRKCH-216ENST00000555542 PLEKHH2Q8IVE3 1493 aa38.86■■■■□ 3.81
PRKCH-216ENST00000555542 VPS8Q8N3P4 1428 aa38.86■■■■□ 3.81
PRKCH-216ENST00000555542 TIAM1Q13009 1591 aa38.86■■■■□ 3.81
PRKCH-216ENST00000555542 HNRNPMP52272 730 aaKnown RBP eCLIP38.85■■■■□ 3.81
PRKCH-216ENST00000555542 REREQ9P2R6 1566 aa38.83■■■■□ 3.81
PRKCH-216ENST00000555542 KIDINS220Q9ULH0 1771 aa38.83■■■■□ 3.81
PRKCH-216ENST00000555542 SUPT6HQ7KZ85 1726 aaKnown RBP38.8■■■■□ 3.8
PRKCH-216ENST00000555542 KIAA1107Q9UPP5 1409 aa38.8■■■■□ 3.8
PRKCH-216ENST00000555542 SPAG9O60271 1321 aaKnown RBP38.79■■■■□ 3.8
PRKCH-216ENST00000555542 NCOA2Q15596 1464 aa38.73■■■■□ 3.79
PRKCH-216ENST00000555542 AGLP35573 1532 aa38.7■■■■□ 3.79
PRKCH-216ENST00000555542 ATP7AQ04656 1500 aa38.7■■■■□ 3.79
PRKCH-216ENST00000555542 ZNF644Q9H582 1327 aaPredicted RBP38.69■■■■□ 3.78
PRKCH-216ENST00000555542 LMTK3Q96Q04 1460 aa38.69■■■■□ 3.78
PRKCH-216ENST00000555542 ESF1Q9H501 851 aaKnown RBP38.67■■■■□ 3.78
PRKCH-216ENST00000555542 INO80Q9ULG1 1556 aaPredicted RBP38.65■■■■□ 3.78
PRKCH-216ENST00000555542 LRRC9Q6ZRR7 1453 aa38.64■■■■□ 3.78
PRKCH-216ENST00000555542 CEBPAP49715 358 aaPredicted RBP38.61■■■■□ 3.77
PRKCH-216ENST00000555542 CAMSAP2Q08AD1 1489 aa38.57■■■■□ 3.76
PRKCH-216ENST00000555542 MBD5Q9P267 1494 aa38.57■■■■□ 3.76
PRKCH-216ENST00000555542 MAP3K1Q13233 1512 aa38.57■■■■□ 3.76
PRKCH-216ENST00000555542 A2MP01023 1474 aa38.54■■■■□ 3.76
PRKCH-216ENST00000555542 HSPA2P54652 639 aa38.53■■■■□ 3.76
PRKCH-216ENST00000555542 APLP2Q06481 763 aa38.52■■■■□ 3.76
PRKCH-216ENST00000555542 ADGBQ8N7X0 1667 aa38.52■■■■□ 3.76
PRKCH-216ENST00000555542 PREX1Q8TCU6 1659 aa38.52■■■■□ 3.76
PRKCH-216ENST00000555542 KANK4Q5T7N3 995 aaPredicted RBP38.5■■■■□ 3.75
PRKCH-216ENST00000555542 C3P01024 1663 aa38.49■■■■□ 3.75
PRKCH-216ENST00000555542 CCDC141Q6ZP82 1450 aa38.49■■■■□ 3.75
PRKCH-216ENST00000555542 PLXNC1O60486 1568 aa38.48■■■■□ 3.75
PRKCH-216ENST00000555542 CNTLNQ9NXG0 1405 aa38.48■■■■□ 3.75
PRKCH-216ENST00000555542 RTEL1-TNFRSF6BF6WH68 1400 aa38.46■■■■□ 3.75
PRKCH-216ENST00000555542 RSPH4AQ5TD94 716 aa38.44■■■■□ 3.74
PRKCH-216ENST00000555542 UHRF1BP1Q6BDS2 1440 aa38.4■■■■□ 3.74
PRKCH-216ENST00000555542 GGT6Q6P531 493 aa38.39■■■■□ 3.74
PRKCH-216ENST00000555542 ARHGEF5Q12774 1597 aa38.38■■■■□ 3.73
PRKCH-216ENST00000555542 SETD1BQ9UPS6 1966 aaKnown RBP38.37■■■■□ 3.73
PRKCH-216ENST00000555542 MROH2AA6NES4 1674 aa38.37■■■■□ 3.73
PRKCH-216ENST00000555542 MYOM3Q5VTT5 1437 aa38.36■■■■□ 3.73
PRKCH-216ENST00000555542 TSPY4P0CV99 314 aa38.35■■■■□ 3.73
PRKCH-216ENST00000555542 TSPY10P0CW01 314 aa38.35■■■■□ 3.73
PRKCH-216ENST00000555542 CLTCQ00610 1675 aaKnown RBP38.35■■■■□ 3.73
PRKCH-216ENST00000555542 DHX29Q7Z478 1369 aaKnown RBP38.31■■■■□ 3.72
PRKCH-216ENST00000555542 MIA2Q96PC5 1412 aa38.3■■■■□ 3.72
PRKCH-216ENST00000555542 ILDR1Q86SU0 546 aaPredicted RBP38.3■■■■□ 3.72
PRKCH-216ENST00000555542 ZMYM3Q14202 1370 aa38.3■■■■□ 3.72
PRKCH-216ENST00000555542 KIF3BO15066 747 aa38.23■■■■□ 3.71
PRKCH-216ENST00000555542 PPP6R1Q9UPN7 881 aa38.23■■■■□ 3.71
PRKCH-216ENST00000555542 NPATQ14207 1427 aa38.21■■■■□ 3.71
PRKCH-216ENST00000555542 MAST1Q9Y2H9 1570 aa38.18■■■■□ 3.7
PRKCH-216ENST00000555542 PTPN23Q9H3S7 1636 aa38.14■■■■□ 3.7
PRKCH-216ENST00000555542 STRCQ7RTU9 1775 aa38.11■■■■□ 3.69
PRKCH-216ENST00000555542 DMRT2Q9Y5R5 561 aa38.09■■■■□ 3.69
PRKCH-216ENST00000555542 PTPRKQ15262 1439 aa38.09■■■■□ 3.69
PRKCH-216ENST00000555542 KDM5DQ9BY66 1539 aa38.08■■■■□ 3.69
PRKCH-216ENST00000555542 MYO3AQ8NEV4 1616 aa38.06■■■■□ 3.68
PRKCH-216ENST00000555542 WASHC2CQ9Y4E1 1318 aa38.06■■■■□ 3.68
PRKCH-216ENST00000555542 FGD6Q6ZV73 1430 aa38.05■■■■□ 3.68
PRKCH-216ENST00000555542 FAM135AQ9P2D6 1515 aa38.05■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms