RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 HS6ST3Q8IZP7 471 aa14.51□□□□□ -0.09
SEC23A-209ENST00000555363 FAM205CA6NFA0 338 aa14.48□□□□□ -0.09
SEC23A-209ENST00000555363 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
SEC23A-209ENST00000555363 HOXB1P14653 301 aaPredicted RBP14.42□□□□□ -0.1
SEC23A-209ENST00000555363 HS3ST6Q96QI5 342 aa14.42□□□□□ -0.1
SEC23A-209ENST00000555363 TMC2Q8TDI7 906 aa14.41□□□□□ -0.1
SEC23A-209ENST00000555363 ERBB3P21860 1342 aa14.4□□□□□ -0.1
SEC23A-209ENST00000555363 PPP1R37O75864 691 aa14.39□□□□□ -0.11
SEC23A-209ENST00000555363 ZSWIM6Q9HCJ5 1215 aa14.38□□□□□ -0.11
SEC23A-209ENST00000555363 C2orf72A6NCS6 295 aa14.37□□□□□ -0.11
SEC23A-209ENST00000555363 RYDENQ9NUL5 291 aaKnown RBP14.33□□□□□ -0.12
SEC23A-209ENST00000555363 POTEB3A0JP26 581 aa14.3□□□□□ -0.12
SEC23A-209ENST00000555363 KIF3CO14782 793 aa14.3□□□□□ -0.12
SEC23A-209ENST00000555363 ARSIQ5FYB1 569 aa14.3□□□□□ -0.12
SEC23A-209ENST00000555363 POTEBQ6S5H4 581 aa14.3□□□□□ -0.12
SEC23A-209ENST00000555363 VARS2Q5ST30 1063 aaKnown RBP14.28□□□□□ -0.12
SEC23A-209ENST00000555363 GPR153Q6NV75 609 aa14.28□□□□□ -0.12
SEC23A-209ENST00000555363 NKX1-1Q15270 411 aaPredicted RBP14.25□□□□□ -0.13
SEC23A-209ENST00000555363 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
SEC23A-209ENST00000555363 KHSRPQ92945 711 aaKnown RBP eCLIP14.22□□□□□ -0.136e-7■□□□□ 10.8
SEC23A-209ENST00000555363 SPNS2Q8IVW8 549 aa14.21□□□□□ -0.13
SEC23A-209ENST00000555363 KRTAP3-3Q9BYR6 98 aa14.19□□□□□ -0.14
SEC23A-209ENST00000555363 KRTAP3-2Q9BYR7 98 aa14.19□□□□□ -0.14
SEC23A-209ENST00000555363 PCDHGA4Q9Y5G9 962 aa14.17□□□□□ -0.14
SEC23A-209ENST00000555363 ZNF316A6NFI3 1004 aaPredicted RBP14.16□□□□□ -0.14
SEC23A-209ENST00000555363 NUDT7P0C024 238 aa14.16□□□□□ -0.14
SEC23A-209ENST00000555363 GPHNQ9NQX3 736 aaPredicted RBP14.16□□□□□ -0.14
SEC23A-209ENST00000555363 SLC34A2O95436 690 aa14.15□□□□□ -0.14
SEC23A-209ENST00000555363 PLPP6Q8IY26 295 aa14.15□□□□□ -0.14
SEC23A-209ENST00000555363 MMRN1Q13201 1228 aa14.14□□□□□ -0.15
SEC23A-209ENST00000555363 FOXK1P85037 733 aa14.13□□□□□ -0.15
SEC23A-209ENST00000555363 ZNF687Q8N1G0 1237 aa14.13□□□□□ -0.15
SEC23A-209ENST00000555363 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
SEC23A-209ENST00000555363 DSG2Q14126 1118 aa14.09□□□□□ -0.15
SEC23A-209ENST00000555363 TBC1D12O60347 775 aa14.07□□□□□ -0.16
SEC23A-209ENST00000555363 LHX6Q9UPM6 363 aa14.07□□□□□ -0.16
SEC23A-209ENST00000555363 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
SEC23A-209ENST00000555363 PDE4AP27815 886 aa14.04□□□□□ -0.16
SEC23A-209ENST00000555363 PTCD2Q8WV60 388 aaKnown RBP14.03□□□□□ -0.16
SEC23A-209ENST00000555363 PPP1R15BQ5SWA1 713 aa14□□□□□ -0.17
SEC23A-209ENST00000555363 ANKRD13DQ6ZTN6 518 aa14□□□□□ -0.17
SEC23A-209ENST00000555363 CRISPLD2Q9H0B8 497 aa14□□□□□ -0.17
SEC23A-209ENST00000555363 UPF1Q92900 1129 aaKnown RBP eCLIP13.99□□□□□ -0.17
SEC23A-209ENST00000555363 PSDA5PKW4 1024 aaPredicted RBP13.98□□□□□ -0.17
SEC23A-209ENST00000555363 LARP6Q9BRS8 491 aaKnown RBP13.96□□□□□ -0.17
SEC23A-209ENST00000555363 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
SEC23A-209ENST00000555363 PBX2P40425 430 aa13.94□□□□□ -0.18
SEC23A-209ENST00000555363 BBXQ8WY36 941 aaPredicted RBP13.93□□□□□ -0.18
SEC23A-209ENST00000555363 DDX27Q96GQ7 796 aaKnown RBP13.93□□□□□ -0.18
SEC23A-209ENST00000555363 LSM11P83369 360 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC23A-209ENST00000555363 AXIN2Q9Y2T1 843 aa13.92□□□□□ -0.18
SEC23A-209ENST00000555363 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
SEC23A-209ENST00000555363 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
SEC23A-209ENST00000555363 OXER1Q8TDS5 423 aa13.9□□□□□ -0.18
SEC23A-209ENST00000555363 RNF166Q96A37 237 aaPredicted RBP13.9□□□□□ -0.18
SEC23A-209ENST00000555363 MYT1LQ9UL68 1186 aa13.9□□□□□ -0.18
SEC23A-209ENST00000555363 PTGER2P43116 358 aa13.89□□□□□ -0.19
SEC23A-209ENST00000555363 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
SEC23A-209ENST00000555363 KDM4FA0A1W2PPD8 638 aa13.86□□□□□ -0.19
SEC23A-209ENST00000555363 ARHGAP33O14559 1287 aa13.85□□□□□ -0.19
SEC23A-209ENST00000555363 KCNH8Q96L42 1107 aa13.85□□□□□ -0.19
SEC23A-209ENST00000555363 MAP3K9P80192 1104 aa13.82□□□□□ -0.2
SEC23A-209ENST00000555363 POTEEQ6S8J3 1075 aa13.82□□□□□ -0.2
SEC23A-209ENST00000555363 SPRYD3Q8NCJ5 442 aa13.82□□□□□ -0.2
SEC23A-209ENST00000555363 MFSD10Q14728 455 aa13.81□□□□□ -0.2
SEC23A-209ENST00000555363 CADPS2Q86UW7 1296 aa13.81□□□□□ -0.2
SEC23A-209ENST00000555363 ZNF454Q8N9F8 522 aa13.81□□□□□ -0.2
SEC23A-209ENST00000555363 EVI5O60447 810 aa13.78□□□□□ -0.2
SEC23A-209ENST00000555363 PSEN2P49810 448 aa13.78□□□□□ -0.2
SEC23A-209ENST00000555363 KCNK17Q96T54 332 aa13.76□□□□□ -0.21
SEC23A-209ENST00000555363 ADGRD1Q6QNK2 874 aa13.75□□□□□ -0.21
SEC23A-209ENST00000555363 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
SEC23A-209ENST00000555363 STAC3Q96MF2 364 aa13.74□□□□□ -0.21
SEC23A-209ENST00000555363 DMRTA1Q5VZB9 504 aa13.72□□□□□ -0.21
SEC23A-209ENST00000555363 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
SEC23A-209ENST00000555363 EMILIN3Q9NT22 766 aa13.71□□□□□ -0.21
SEC23A-209ENST00000555363 FOSBP53539 338 aa13.69□□□□□ -0.22
SEC23A-209ENST00000555363 TK2O00142 265 aa13.68□□□□□ -0.22
SEC23A-209ENST00000555363 JPH4Q96JJ6 628 aa13.68□□□□□ -0.22
SEC23A-209ENST00000555363 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
SEC23A-209ENST00000555363 PTPREP23469 700 aa13.67□□□□□ -0.22
SEC23A-209ENST00000555363 ZDHHC16Q969W1 377 aa13.66□□□□□ -0.22
SEC23A-209ENST00000555363 BCL2L12Q9HB09 334 aa13.66□□□□□ -0.22
SEC23A-209ENST00000555363 DPYSL4O14531 572 aa13.61□□□□□ -0.23
SEC23A-209ENST00000555363 CAMK2BQ13554 666 aa13.6□□□□□ -0.23
SEC23A-209ENST00000555363 WDR70Q9NW82 654 aa13.6□□□□□ -0.23
SEC23A-209ENST00000555363 ADAM33Q9BZ11 813 aa13.59□□□□□ -0.23
SEC23A-209ENST00000555363 HRO43593 1189 aa13.58□□□□□ -0.24
SEC23A-209ENST00000555363 VPS9D1Q9Y2B5 631 aa13.57□□□□□ -0.24
SEC23A-209ENST00000555363 TYW1BQ6NUM6 668 aa13.55□□□□□ -0.24
SEC23A-209ENST00000555363 KCTD12Q96CX2 325 aaKnown RBP13.55□□□□□ -0.24
SEC23A-209ENST00000555363 HCSTQ9UBK5 93 aa13.55□□□□□ -0.24
SEC23A-209ENST00000555363 PCDHGA10Q9Y5H3 936 aa13.55□□□□□ -0.24
SEC23A-209ENST00000555363 PHF14O94880 888 aa13.54□□□□□ -0.24
SEC23A-209ENST00000555363 FBXW7Q969H0 707 aa13.54□□□□□ -0.24
SEC23A-209ENST00000555363 GOLGA8CPA6NN73 597 aa13.53□□□□□ -0.24
SEC23A-209ENST00000555363 SLC4A5Q9BY07 1137 aa13.52□□□□□ -0.25
SEC23A-209ENST00000555363 ZBED2Q9BTP6 218 aa13.51□□□□□ -0.25
SEC23A-209ENST00000555363 E2F4Q16254 413 aa13.5□□□□□ -0.25
SEC23A-209ENST00000555363 EPAS1Q99814 870 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms