RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
CHD8-208ENST00000555301 PREX2Q70Z35 1606 aa22.06■■□□□ 1.12
CHD8-208ENST00000555301 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
CHD8-208ENST00000555301 TSPOAP1O95153 1857 aa22.05■■□□□ 1.12
CHD8-208ENST00000555301 AKNAQ7Z591 1439 aa22.05■■□□□ 1.12
CHD8-208ENST00000555301 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
CHD8-208ENST00000555301 ITSN2Q9NZM3 1697 aa22.03■■□□□ 1.12
CHD8-208ENST00000555301 MIA2Q96PC5 1412 aa22.03■■□□□ 1.12
CHD8-208ENST00000555301 CDC42BPAQ5VT25 1732 aa22.03■■□□□ 1.12
CHD8-208ENST00000555301 ZNF777Q9ULD5 760 aaPredicted RBP22.02■■□□□ 1.12
CHD8-208ENST00000555301 CDC42BPBQ9Y5S2 1711 aa22■■□□□ 1.11
CHD8-208ENST00000555301 ADGRL1O94910 1474 aa21.99■■□□□ 1.11
CHD8-208ENST00000555301 PLEKHH2Q8IVE3 1493 aa21.97■■□□□ 1.11
CHD8-208ENST00000555301 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
CHD8-208ENST00000555301 SCAPERQ9BY12 1400 aa21.97■■□□□ 1.11
CHD8-208ENST00000555301 KIAA1107Q9UPP5 1409 aa21.96■■□□□ 1.11
CHD8-208ENST00000555301 ZNF644Q9H582 1327 aaPredicted RBP21.94■■□□□ 1.1
CHD8-208ENST00000555301 DENND4BO75064 1496 aaPredicted RBP21.94■■□□□ 1.1
CHD8-208ENST00000555301 ABCC1P33527 1531 aa21.93■■□□□ 1.1
CHD8-208ENST00000555301 SAMD9LQ8IVG5 1584 aa21.93■■□□□ 1.1
CHD8-208ENST00000555301 KDM6BO15054 1643 aa21.92■■□□□ 1.1
CHD8-208ENST00000555301 CAMSAP2Q08AD1 1489 aa21.92■■□□□ 1.1
CHD8-208ENST00000555301 COL17A1Q9UMD9 1497 aaPredicted RBP21.92■■□□□ 1.1
CHD8-208ENST00000555301 RAPGEF3O95398 923 aa21.9■■□□□ 1.1
CHD8-208ENST00000555301 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.1
CHD8-208ENST00000555301 RSPH4AQ5TD94 716 aa21.9■■□□□ 1.1
CHD8-208ENST00000555301 POGZQ7Z3K3 1410 aa21.89■■□□□ 1.1
CHD8-208ENST00000555301 ARHGEF12Q9NZN5 1544 aa21.89■■□□□ 1.09
CHD8-208ENST00000555301 TCOF1Q13428 1488 aaKnown RBP21.89■■□□□ 1.09
CHD8-208ENST00000555301 SYCP2Q9BX26 1530 aa21.88■■□□□ 1.09
CHD8-208ENST00000555301 ZNF518AQ6AHZ1 1483 aa21.88■■□□□ 1.09
CHD8-208ENST00000555301 MBD5Q9P267 1494 aa21.87■■□□□ 1.09
CHD8-208ENST00000555301 PTPN23Q9H3S7 1636 aa21.87■■□□□ 1.09
CHD8-208ENST00000555301 AFAP1Q8N556 730 aa21.86■■□□□ 1.09
CHD8-208ENST00000555301 TRAPPC8Q9Y2L5 1435 aa21.86■■□□□ 1.09
CHD8-208ENST00000555301 FAM50AQ14320 339 aaKnown RBP21.85■■□□□ 1.09
CHD8-208ENST00000555301 RRBP1Q9P2E9 1410 aaKnown RBP21.84■■□□□ 1.09
CHD8-208ENST00000555301 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.84■■□□□ 1.09
CHD8-208ENST00000555301 CCDC141Q6ZP82 1450 aa21.82■■□□□ 1.08
CHD8-208ENST00000555301 ARHGEF5Q12774 1597 aa21.8■■□□□ 1.08
CHD8-208ENST00000555301 FRMPD1Q5SYB0 1578 aa21.8■■□□□ 1.08
CHD8-208ENST00000555301 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
CHD8-208ENST00000555301 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
CHD8-208ENST00000555301 KDM5CP41229 1560 aa21.79■■□□□ 1.08
CHD8-208ENST00000555301 MAGI2Q86UL8 1455 aa21.79■■□□□ 1.08
CHD8-208ENST00000555301 RICTORQ6R327 1708 aa21.79■■□□□ 1.08
CHD8-208ENST00000555301 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
CHD8-208ENST00000555301 ZMYM4Q5VZL5 1548 aa21.78■■□□□ 1.08
CHD8-208ENST00000555301 MYT1LQ9UL68 1186 aa21.77■■□□□ 1.08
CHD8-208ENST00000555301 MLH3Q9UHC1 1453 aa21.77■■□□□ 1.07
CHD8-208ENST00000555301 ABCC5O15440 1437 aa21.75■■□□□ 1.07
CHD8-208ENST00000555301 DAPK1P53355 1430 aa21.75■■□□□ 1.07
CHD8-208ENST00000555301 RTEL1-TNFRSF6BF6WH68 1400 aa21.74■■□□□ 1.07
CHD8-208ENST00000555301 HECW2Q9P2P5 1572 aa21.72■■□□□ 1.07
CHD8-208ENST00000555301 DNMT1P26358 1616 aaKnown RBP21.72■■□□□ 1.07
CHD8-208ENST00000555301 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
CHD8-208ENST00000555301 C9orf84Q5VXU9 1444 aa21.71■■□□□ 1.07
CHD8-208ENST00000555301 ZFYVE16Q7Z3T8 1539 aa21.7■■□□□ 1.07
CHD8-208ENST00000555301 YEATS2Q9ULM3 1422 aa21.69■■□□□ 1.06
CHD8-208ENST00000555301 ATP7AQ04656 1500 aa21.69■■□□□ 1.06
CHD8-208ENST00000555301 MAST1Q9Y2H9 1570 aa21.68■■□□□ 1.06
CHD8-208ENST00000555301 INO80Q9ULG1 1556 aaPredicted RBP21.67■■□□□ 1.06
CHD8-208ENST00000555301 ITGAEP38570 1179 aa21.67■■□□□ 1.06
CHD8-208ENST00000555301 ARHGEF40Q8TER5 1519 aa21.66■■□□□ 1.06
CHD8-208ENST00000555301 CHIC2Q9UKJ5 165 aa21.65■■□□□ 1.06
CHD8-208ENST00000555301 ATP10AO60312 1499 aa21.64■■□□□ 1.06
CHD8-208ENST00000555301 ANKRD30AQ9BXX3 1397 aa21.64■■□□□ 1.06
CHD8-208ENST00000555301 KIDINS220Q9ULH0 1771 aa21.64■■□□□ 1.05
CHD8-208ENST00000555301 PTPRKQ15262 1439 aa21.63■■□□□ 1.05
CHD8-208ENST00000555301 CROCC2H7BZ55 1655 aa21.63■■□□□ 1.05
CHD8-208ENST00000555301 DIP2CQ9Y2E4 1556 aa21.61■■□□□ 1.05
CHD8-208ENST00000555301 ADGRL2O95490 1459 aa21.61■■□□□ 1.05
CHD8-208ENST00000555301 ROCK1Q13464 1354 aa21.61■■□□□ 1.05
CHD8-208ENST00000555301 NCOA1Q15788 1441 aa21.6■■□□□ 1.05
CHD8-208ENST00000555301 ABCA6Q8N139 1617 aa21.59■■□□□ 1.05
CHD8-208ENST00000555301 KIF15Q9NS87 1388 aa21.59■■□□□ 1.05
CHD8-208ENST00000555301 A2MP01023 1474 aa21.58■■□□□ 1.05
CHD8-208ENST00000555301 PLXNC1O60486 1568 aa21.58■■□□□ 1.05
CHD8-208ENST00000555301 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.05
CHD8-208ENST00000555301 DHX29Q7Z478 1369 aaKnown RBP21.58■■□□□ 1.04
CHD8-208ENST00000555301 REREQ9P2R6 1566 aa21.57■■□□□ 1.04
CHD8-208ENST00000555301 DUOX2Q9NRD8 1548 aa21.54■■□□□ 1.04
CHD8-208ENST00000555301 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
CHD8-208ENST00000555301 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
CHD8-208ENST00000555301 ADGBQ8N7X0 1667 aa21.53■■□□□ 1.04
CHD8-208ENST00000555301 AGLP35573 1532 aa21.51■■□□□ 1.03
CHD8-208ENST00000555301 ERBINQ96RT1 1412 aa21.5■■□□□ 1.03
CHD8-208ENST00000555301 ANKRD50Q9ULJ7 1429 aa21.48■■□□□ 1.03
CHD8-208ENST00000555301 KIF3BO15066 747 aa21.47■■□□□ 1.03
CHD8-208ENST00000555301 HFM1A2PYH4 1435 aa21.46■■□□□ 1.03
CHD8-208ENST00000555301 NAIPQ13075 1403 aa21.45■■□□□ 1.02
CHD8-208ENST00000555301 MLECQ14165 292 aa21.42■■□□□ 1.02
CHD8-208ENST00000555301 GGT6Q6P531 493 aa21.42■■□□□ 1.02
CHD8-208ENST00000555301 EIF2AK4Q9P2K8 1649 aaKnown RBP21.42■■□□□ 1.02
CHD8-208ENST00000555301 SIGLEC1Q9BZZ2 1709 aa21.41■■□□□ 1.02
CHD8-208ENST00000555301 PPP6R1Q9UPN7 881 aa21.41■■□□□ 1.02
CHD8-208ENST00000555301 BCORL1Q5H9F3 1711 aa21.38■■□□□ 1.01
CHD8-208ENST00000555301 SETD5Q9C0A6 1442 aa21.37■■□□□ 1.01
CHD8-208ENST00000555301 ESF1Q9H501 851 aaKnown RBP21.36■■□□□ 1.01
CHD8-208ENST00000555301 GCC2Q8IWJ2 1684 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms