RNA–Protein interactions for RNA: ENST00000555240.1

CASC1-208, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-208ENST00000555240 POTEBQ6S5H4 581 aa8.1□□□□□ -1.11
CASC1-208ENST00000555240 BBXQ8WY36 941 aaPredicted RBP8.1□□□□□ -1.11
CASC1-208ENST00000555240 MS4A4AQ96JQ5 239 aa8.1□□□□□ -1.11
CASC1-208ENST00000555240 BOLA1Q9Y3E2 137 aa8.1□□□□□ -1.11
CASC1-208ENST00000555240 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.09□□□□□ -1.11
CASC1-208ENST00000555240 C3orf67Q6ZVT6 689 aa8.08□□□□□ -1.12
CASC1-208ENST00000555240 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
CASC1-208ENST00000555240 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
CASC1-208ENST00000555240 EMP3P54852 163 aa8.07□□□□□ -1.12
CASC1-208ENST00000555240 HS3ST6Q96QI5 342 aa8.05□□□□□ -1.12
CASC1-208ENST00000555240 FAM205CA6NFA0 338 aa8.03□□□□□ -1.12
CASC1-208ENST00000555240 MICALL2Q8IY33 904 aa8.03□□□□□ -1.12
CASC1-208ENST00000555240 GTPBP6O43824 516 aaPredicted RBP8.02□□□□□ -1.13
CASC1-208ENST00000555240 PPP1R37O75864 691 aa8.02□□□□□ -1.13
CASC1-208ENST00000555240 SPRYD3Q8NCJ5 442 aa8.02□□□□□ -1.13
CASC1-208ENST00000555240 PAXIP1Q6ZW49 1069 aaPredicted RBP8□□□□□ -1.13
CASC1-208ENST00000555240 CFAP44Q96MT7 982 aa8□□□□□ -1.13
CASC1-208ENST00000555240 TMC2Q8TDI7 906 aa7.93□□□□□ -1.14
CASC1-208ENST00000555240 HOXB3P14651 431 aaPredicted RBP7.92□□□□□ -1.14
CASC1-208ENST00000555240 TMEM92Q6UXU6 159 aa7.9□□□□□ -1.14
CASC1-208ENST00000555240 C2orf72A6NCS6 295 aa7.88□□□□□ -1.15
CASC1-208ENST00000555240 PDE4AP27815 886 aa7.87□□□□□ -1.15
CASC1-208ENST00000555240 HOXB1P14653 301 aaPredicted RBP7.86□□□□□ -1.15
CASC1-208ENST00000555240 PLCB2Q00722 1185 aa7.86□□□□□ -1.15
CASC1-208ENST00000555240 GPHNQ9NQX3 736 aaPredicted RBP7.86□□□□□ -1.15
CASC1-208ENST00000555240 KIF3CO14782 793 aa7.85□□□□□ -1.15
CASC1-208ENST00000555240 DOK7Q18PE1 504 aa7.84□□□□□ -1.15
CASC1-208ENST00000555240 ZNF710Q8N1W2 664 aa7.84□□□□□ -1.15
CASC1-208ENST00000555240 RNF166Q96A37 237 aaPredicted RBP7.84□□□□□ -1.15
CASC1-208ENST00000555240 ERBB3P21860 1342 aa7.83□□□□□ -1.16
CASC1-208ENST00000555240 RIMBP2O15034 1052 aa7.83□□□□□ -1.16
CASC1-208ENST00000555240 CADPS2Q86UW7 1296 aa7.83□□□□□ -1.16
CASC1-208ENST00000555240 LARP6Q9BRS8 491 aaKnown RBP7.83□□□□□ -1.16
CASC1-208ENST00000555240 NCKAP5LQ9HCH0 1330 aa7.82□□□□□ -1.16
CASC1-208ENST00000555240 FOXK1P85037 733 aa7.82□□□□□ -1.16
CASC1-208ENST00000555240 CRISPLD2Q9H0B8 497 aa7.82□□□□□ -1.16
CASC1-208ENST00000555240 DSG2Q14126 1118 aa7.81□□□□□ -1.16
CASC1-208ENST00000555240 PLPP6Q8IY26 295 aa7.81□□□□□ -1.16
CASC1-208ENST00000555240 DDX27Q96GQ7 796 aaKnown RBP7.81□□□□□ -1.16
CASC1-208ENST00000555240 VARS2Q5ST30 1063 aaKnown RBP7.8□□□□□ -1.16
CASC1-208ENST00000555240 PPP1R15BQ5SWA1 713 aa7.8□□□□□ -1.16
CASC1-208ENST00000555240 TSHZ2Q9NRE2 1034 aa7.8□□□□□ -1.16
CASC1-208ENST00000555240 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
CASC1-208ENST00000555240 HAP1P54257 671 aaPredicted RBP7.78□□□□□ -1.16
CASC1-208ENST00000555240 WDR70Q9NW82 654 aa7.77□□□□□ -1.17
CASC1-208ENST00000555240 MFSD10Q14728 455 aa7.76□□□□□ -1.17
CASC1-208ENST00000555240 ZSWIM6Q9HCJ5 1215 aa7.76□□□□□ -1.17
CASC1-208ENST00000555240 TBC1D12O60347 775 aa7.73□□□□□ -1.17
CASC1-208ENST00000555240 SLC34A2O95436 690 aa7.73□□□□□ -1.17
CASC1-208ENST00000555240 ARSIQ5FYB1 569 aa7.73□□□□□ -1.17
CASC1-208ENST00000555240 ZNF687Q8N1G0 1237 aa7.72□□□□□ -1.17
CASC1-208ENST00000555240 UPF1Q92900 1129 aaKnown RBP eCLIP7.72□□□□□ -1.17
CASC1-208ENST00000555240 PCDHGA4Q9Y5G9 962 aa7.72□□□□□ -1.17
CASC1-208ENST00000555240 GPR153Q6NV75 609 aa7.71□□□□□ -1.18
CASC1-208ENST00000555240 PTCD2Q8WV60 388 aaKnown RBP7.7□□□□□ -1.18
CASC1-208ENST00000555240 KHSRPQ92945 711 aaKnown RBP eCLIP7.69□□□□□ -1.18
CASC1-208ENST00000555240 NUDT7P0C024 238 aa7.68□□□□□ -1.18
CASC1-208ENST00000555240 MAP3K9P80192 1104 aa7.68□□□□□ -1.18
CASC1-208ENST00000555240 E2F4Q16254 413 aa7.68□□□□□ -1.18
CASC1-208ENST00000555240 OXER1Q8TDS5 423 aa7.68□□□□□ -1.18
CASC1-208ENST00000555240 ZNF316A6NFI3 1004 aaPredicted RBP7.67□□□□□ -1.18
CASC1-208ENST00000555240 CAMK2BQ13554 666 aa7.66□□□□□ -1.18
CASC1-208ENST00000555240 ANKRD13DQ6ZTN6 518 aa7.65□□□□□ -1.18
CASC1-208ENST00000555240 EMILIN3Q9NT22 766 aa7.65□□□□□ -1.18
CASC1-208ENST00000555240 PTGER2P43116 358 aa7.64□□□□□ -1.19
CASC1-208ENST00000555240 DPYSL4O14531 572 aa7.63□□□□□ -1.19
CASC1-208ENST00000555240 EVI5O60447 810 aa7.62□□□□□ -1.19
CASC1-208ENST00000555240 VSIG10Q8N0Z9 540 aa7.62□□□□□ -1.19
CASC1-208ENST00000555240 LHX6Q9UPM6 363 aa7.62□□□□□ -1.19
CASC1-208ENST00000555240 PSDA5PKW4 1024 aaPredicted RBP7.6□□□□□ -1.19
CASC1-208ENST00000555240 P3H3Q8IVL6 736 aa7.6□□□□□ -1.19
CASC1-208ENST00000555240 LSM11P83369 360 aaKnown RBP eCLIP7.59□□□□□ -1.19
CASC1-208ENST00000555240 KDM4FA0A1W2PPD8 638 aa7.58□□□□□ -1.2
CASC1-208ENST00000555240 KCNV2Q8TDN2 545 aa7.58□□□□□ -1.2
CASC1-208ENST00000555240 KDM2AQ9Y2K7 1162 aa7.58□□□□□ -1.2
CASC1-208ENST00000555240 SPDYE16A6NNV3 312 aaPredicted RBP7.56□□□□□ -1.2
CASC1-208ENST00000555240 PPP4R3BQ5MIZ7 849 aa7.56□□□□□ -1.2
CASC1-208ENST00000555240 ZNF454Q8N9F8 522 aa7.56□□□□□ -1.2
CASC1-208ENST00000555240 ARHGEF1Q92888 912 aaKnown RBP7.56□□□□□ -1.2
CASC1-208ENST00000555240 ANO8Q9HCE9 1232 aaPredicted RBP7.56□□□□□ -1.2
CASC1-208ENST00000555240 ARIH1Q9Y4X5 557 aaPredicted RBP7.56□□□□□ -1.2
CASC1-208ENST00000555240 PDIA6Q15084 440 aa7.55□□□□□ -1.2
CASC1-208ENST00000555240 POTEEQ6S8J3 1075 aa7.55□□□□□ -1.2
CASC1-208ENST00000555240 PLA2G2EQ9NZK7 142 aa7.55□□□□□ -1.2
CASC1-208ENST00000555240 JPH4Q96JJ6 628 aa7.53□□□□□ -1.2
CASC1-208ENST00000555240 FOSBP53539 338 aa7.52□□□□□ -1.21
CASC1-208ENST00000555240 DDX12PQ92771 950 aa7.52□□□□□ -1.21
CASC1-208ENST00000555240 KCNH8Q96L42 1107 aa7.52□□□□□ -1.21
CASC1-208ENST00000555240 AXIN2Q9Y2T1 843 aa7.52□□□□□ -1.21
CASC1-208ENST00000555240 PHF14O94880 888 aa7.51□□□□□ -1.21
CASC1-208ENST00000555240 GRXCR2A6NFK2 248 aa7.5□□□□□ -1.21
CASC1-208ENST00000555240 PBX2P40425 430 aa7.5□□□□□ -1.21
CASC1-208ENST00000555240 ZDHHC16Q969W1 377 aa7.5□□□□□ -1.21
CASC1-208ENST00000555240 NBR1Q14596 966 aa7.49□□□□□ -1.21
CASC1-208ENST00000555240 TYW1BQ6NUM6 668 aa7.49□□□□□ -1.21
CASC1-208ENST00000555240 PCDHGA10Q9Y5H3 936 aa7.49□□□□□ -1.21
CASC1-208ENST00000555240 ARHGAP33O14559 1287 aa7.48□□□□□ -1.21
CASC1-208ENST00000555240 SLC24A1O60721 1099 aa7.48□□□□□ -1.21
CASC1-208ENST00000555240 FBXW7Q969H0 707 aa7.48□□□□□ -1.21
CASC1-208ENST00000555240 EPAS1Q99814 870 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms