RNA–Protein interactions for RNA: ENST00000555188.5

SHE-203, Transcript of Src homology 2 domain containing E, humanhuman

TSL 1 (best)

Gene SHE, Length 6,855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHE-203ENST00000555188 SAFB2Q14151 953 aaKnown RBP eCLIP11.04□□□□□ -0.64
SHE-203ENST00000555188 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
SHE-203ENST00000555188 SLC4A3P48751 1232 aa11.03□□□□□ -0.64
SHE-203ENST00000555188 CLSTN1O94985 981 aa11.03□□□□□ -0.64
SHE-203ENST00000555188 CEP164Q9UPV0 1460 aa11.03□□□□□ -0.64
SHE-203ENST00000555188 RSF1Q96T23 1441 aaPredicted RBP11.03□□□□□ -0.64
SHE-203ENST00000555188 CC2D1BQ5T0F9 858 aaKnown RBP11.03□□□□□ -0.64
SHE-203ENST00000555188 NRDCO43847 1150 aa11.02□□□□□ -0.64
SHE-203ENST00000555188 ERCC6Q03468 1493 aa11.02□□□□□ -0.64
SHE-203ENST00000555188 MS4A1P11836 297 aa11.01□□□□□ -0.65
SHE-203ENST00000555188 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
SHE-203ENST00000555188 CFAP53Q96M91 514 aa11□□□□□ -0.65
SHE-203ENST00000555188 TSPY4P0CV99 314 aa11□□□□□ -0.65
SHE-203ENST00000555188 TSPY10P0CW01 314 aa11□□□□□ -0.65
SHE-203ENST00000555188 RB1CC1Q8TDY2 1594 aa11□□□□□ -0.65
SHE-203ENST00000555188 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
SHE-203ENST00000555188 SETD5Q9C0A6 1442 aa10.99□□□□□ -0.65
SHE-203ENST00000555188 CDCA8Q53HL2 280 aa10.98□□□□□ -0.65
SHE-203ENST00000555188 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
SHE-203ENST00000555188 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
SHE-203ENST00000555188 BRPF3Q9ULD4 1205 aa10.97□□□□□ -0.65
SHE-203ENST00000555188 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
SHE-203ENST00000555188 GOLGA6L4A6NEF3 574 aa10.96□□□□□ -0.65
SHE-203ENST00000555188 MSH5O43196 834 aa10.96□□□□□ -0.65
SHE-203ENST00000555188 DDX11L8A8MPP1 907 aa10.96□□□□□ -0.65
SHE-203ENST00000555188 FAM13BQ9NYF5 915 aa10.96□□□□□ -0.66
SHE-203ENST00000555188 CALD1Q05682 793 aaKnown RBP10.95□□□□□ -0.66
SHE-203ENST00000555188 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
SHE-203ENST00000555188 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
SHE-203ENST00000555188 SYAP1Q96A49 352 aaPredicted RBP10.94□□□□□ -0.66
SHE-203ENST00000555188 NFKBIBQ15653 356 aa10.94□□□□□ -0.66
SHE-203ENST00000555188 RAB3GAP2Q9H2M9 1393 aa10.94□□□□□ -0.66
SHE-203ENST00000555188 VPS8Q8N3P4 1428 aa10.93□□□□□ -0.66
SHE-203ENST00000555188 RWDD1Q9H446 243 aaPredicted RBP10.93□□□□□ -0.66
SHE-203ENST00000555188 MAPK8IP3Q9UPT6 1336 aa10.93□□□□□ -0.66
SHE-203ENST00000555188 WRNQ14191 1432 aaPredicted RBP eCLIP10.92□□□□□ -0.66
SHE-203ENST00000555188 NUTM2DQ5VT03 806 aaPredicted RBP10.92□□□□□ -0.66
SHE-203ENST00000555188 NUTM2FA1L443 756 aa10.92□□□□□ -0.66
SHE-203ENST00000555188 MEX3CQ5U5Q3 659 aaKnown RBP10.92□□□□□ -0.66
SHE-203ENST00000555188 FAM43AQ8N2R8 423 aa10.92□□□□□ -0.66
SHE-203ENST00000555188 CFAP44Q96MT7 982 aa10.92□□□□□ -0.66
SHE-203ENST00000555188 ZBED9Q6R2W3 1325 aa10.91□□□□□ -0.66
SHE-203ENST00000555188 EXOC6Q8TAG9 804 aa10.91□□□□□ -0.66
SHE-203ENST00000555188 KTN1Q86UP2 1357 aaKnown RBP10.91□□□□□ -0.66
SHE-203ENST00000555188 MCCP23508 829 aa10.9□□□□□ -0.66
SHE-203ENST00000555188 ZNF771Q7L3S4 317 aaPredicted RBP10.9□□□□□ -0.66
SHE-203ENST00000555188 RALBP1Q15311 655 aa10.9□□□□□ -0.66
SHE-203ENST00000555188 PMFBP1Q8TBY8 1022 aa10.9□□□□□ -0.66
SHE-203ENST00000555188 PDE3BQ13370 1112 aa10.9□□□□□ -0.66
SHE-203ENST00000555188 STK26Q9P289 416 aa10.9□□□□□ -0.66
SHE-203ENST00000555188 CENPQQ7L2Z9 268 aaPredicted RBP10.9□□□□□ -0.67
SHE-203ENST00000555188 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.67
SHE-203ENST00000555188 DHX57Q6P158 1386 aaKnown RBP10.89□□□□□ -0.67
SHE-203ENST00000555188 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.89□□□□□ -0.67
SHE-203ENST00000555188 NAP1L2Q9ULW6 460 aaPredicted RBP10.89□□□□□ -0.67
SHE-203ENST00000555188 SKOR2Q2VWA4 1001 aaPredicted RBP10.89□□□□□ -0.67
SHE-203ENST00000555188 RRP1P56182 461 aaKnown RBP10.88□□□□□ -0.67
SHE-203ENST00000555188 KANK4Q5T7N3 995 aaPredicted RBP10.88□□□□□ -0.67
SHE-203ENST00000555188 SOGA1O94964 1423 aa10.88□□□□□ -0.67
SHE-203ENST00000555188 BAZ1BQ9UIG0 1483 aaKnown RBP10.88□□□□□ -0.67
SHE-203ENST00000555188 NACADO15069 1562 aa10.87□□□□□ -0.67
SHE-203ENST00000555188 DDX49Q9Y6V7 483 aaKnown RBP10.87□□□□□ -0.67
SHE-203ENST00000555188 TMF1P82094 1093 aa10.87□□□□□ -0.67
SHE-203ENST00000555188 GOLGA2Q08379 1002 aa10.87□□□□□ -0.67
SHE-203ENST00000555188 POGKQ9P215 609 aa10.86□□□□□ -0.67
SHE-203ENST00000555188 PPP1R1BQ9UD71 204 aaPredicted RBP10.86□□□□□ -0.67
SHE-203ENST00000555188 KCNJ4P48050 445 aa10.85□□□□□ -0.67
SHE-203ENST00000555188 MAP7D2Q96T17 732 aa10.85□□□□□ -0.67
SHE-203ENST00000555188 CSB-PGBD3P0DP91 1061 aa10.85□□□□□ -0.67
SHE-203ENST00000555188 FGD1P98174 961 aa10.85□□□□□ -0.67
SHE-203ENST00000555188 CSPP1Q1MSJ5 1256 aa10.85□□□□□ -0.67
SHE-203ENST00000555188 UBE2Q2Q8WVN8 375 aa10.85□□□□□ -0.67
SHE-203ENST00000555188 TPM2P07951 284 aa10.84□□□□□ -0.67
SHE-203ENST00000555188 PLIN1O60240 522 aa10.84□□□□□ -0.67
SHE-203ENST00000555188 DCAF11Q8TEB1 546 aa10.84□□□□□ -0.67
SHE-203ENST00000555188 PRKRIP1Q9H875 184 aaPredicted RBP10.84□□□□□ -0.67
SHE-203ENST00000555188 PHF14O94880 888 aa10.83□□□□□ -0.68
SHE-203ENST00000555188 U2SURPO15042 1029 aaKnown RBP10.83□□□□□ -0.68
SHE-203ENST00000555188 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
SHE-203ENST00000555188 CRBNQ96SW2 442 aa10.83□□□□□ -0.68
SHE-203ENST00000555188 MTERF4Q7Z6M4 381 aaKnown RBP10.83□□□□□ -0.68
SHE-203ENST00000555188 GGT6Q6P531 493 aa10.82□□□□□ -0.68
SHE-203ENST00000555188 MRE11P49959 708 aa10.82□□□□□ -0.68
SHE-203ENST00000555188 PDE4CQ08493 712 aa10.82□□□□□ -0.68
SHE-203ENST00000555188 IPO8O15397 1037 aaKnown RBP10.81□□□□□ -0.68
SHE-203ENST00000555188 RRP9O43818 475 aaKnown RBP10.81□□□□□ -0.68
SHE-203ENST00000555188 PRM3Q9NNZ6 103 aa10.81□□□□□ -0.68
SHE-203ENST00000555188 CHMP5Q9NZZ3 219 aa10.81□□□□□ -0.68
SHE-203ENST00000555188 R3HCC1Q9Y3T6 440 aaKnown RBP10.81□□□□□ -0.68
SHE-203ENST00000555188 NLRP13Q86W25 1043 aa10.81□□□□□ -0.68
SHE-203ENST00000555188 GOLGA6L1Q8N7Z2 621 aa10.81□□□□□ -0.68
SHE-203ENST00000555188 KIF27Q86VH2 1401 aa10.81□□□□□ -0.68
SHE-203ENST00000555188 CFDP1Q9UEE9 299 aaPredicted RBP10.8□□□□□ -0.68
SHE-203ENST00000555188 FOXD1Q16676 465 aa10.8□□□□□ -0.68
SHE-203ENST00000555188 FRAT2O75474 233 aaPredicted RBP10.8□□□□□ -0.68
SHE-203ENST00000555188 APBB1O00213 710 aa10.8□□□□□ -0.68
SHE-203ENST00000555188 OS9Q13438 667 aaPredicted RBP10.79□□□□□ -0.68
SHE-203ENST00000555188 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
SHE-203ENST00000555188 CLUAP1Q96AJ1 413 aa10.79□□□□□ -0.68
SHE-203ENST00000555188 CENPJQ9HC77 1338 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms