RNA–Protein interactions for RNA: ENST00000555152.1

STRN3-206, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-206ENST00000555152 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
STRN3-206ENST00000555152 SNPHO15079 494 aa12.8□□□□□ -0.36
STRN3-206ENST00000555152 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
STRN3-206ENST00000555152 BBXQ8WY36 941 aaPredicted RBP12.74□□□□□ -0.37
STRN3-206ENST00000555152 POTEB3A0JP26 581 aa12.71□□□□□ -0.37
STRN3-206ENST00000555152 POTEBQ6S5H4 581 aa12.71□□□□□ -0.37
STRN3-206ENST00000555152 RYDENQ9NUL5 291 aaKnown RBP12.71□□□□□ -0.37
STRN3-206ENST00000555152 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
STRN3-206ENST00000555152 TMC2Q8TDI7 906 aa12.69□□□□□ -0.38
STRN3-206ENST00000555152 NCKAP5LQ9HCH0 1330 aa12.68□□□□□ -0.38
STRN3-206ENST00000555152 DOK7Q18PE1 504 aa12.68□□□□□ -0.38
STRN3-206ENST00000555152 GPR153Q6NV75 609 aa12.68□□□□□ -0.38
STRN3-206ENST00000555152 GPHNQ9NQX3 736 aaPredicted RBP12.68□□□□□ -0.38
STRN3-206ENST00000555152 HOXB1P14653 301 aaPredicted RBP12.67□□□□□ -0.38
STRN3-206ENST00000555152 KHSRPQ92945 711 aaKnown RBP eCLIP12.67□□□□□ -0.389e-7■■□□□ 11.7
STRN3-206ENST00000555152 DSG2Q14126 1118 aa12.66□□□□□ -0.38
STRN3-206ENST00000555152 CRISPLD2Q9H0B8 497 aa12.66□□□□□ -0.38
STRN3-206ENST00000555152 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
STRN3-206ENST00000555152 FOXK1P85037 733 aa12.63□□□□□ -0.39
STRN3-206ENST00000555152 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
STRN3-206ENST00000555152 EMP3P54852 163 aa12.62□□□□□ -0.39
STRN3-206ENST00000555152 PLPP6Q8IY26 295 aa12.61□□□□□ -0.39
STRN3-206ENST00000555152 SLC34A2O95436 690 aa12.59□□□□□ -0.39
STRN3-206ENST00000555152 CDAN1Q8IWY9 1227 aa12.59□□□□□ -0.39
STRN3-206ENST00000555152 ZSWIM6Q9HCJ5 1215 aa12.59□□□□□ -0.39
STRN3-206ENST00000555152 FAM205CA6NFA0 338 aa12.58□□□□□ -0.4
STRN3-206ENST00000555152 SPRYD3Q8NCJ5 442 aa12.57□□□□□ -0.4
STRN3-206ENST00000555152 HS3ST6Q96QI5 342 aa12.57□□□□□ -0.4
STRN3-206ENST00000555152 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
STRN3-206ENST00000555152 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
STRN3-206ENST00000555152 PCDHGA4Q9Y5G9 962 aa12.55□□□□□ -0.4
STRN3-206ENST00000555152 LARP6Q9BRS8 491 aaKnown RBP12.54□□□□□ -0.4
STRN3-206ENST00000555152 KDM4FA0A1W2PPD8 638 aa12.53□□□□□ -0.4
STRN3-206ENST00000555152 CFAP44Q96MT7 982 aa12.53□□□□□ -0.4
STRN3-206ENST00000555152 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
STRN3-206ENST00000555152 PDE4AP27815 886 aa12.52□□□□□ -0.41
STRN3-206ENST00000555152 PPP1R15BQ5SWA1 713 aa12.52□□□□□ -0.41
STRN3-206ENST00000555152 NUDT7P0C024 238 aa12.51□□□□□ -0.41
STRN3-206ENST00000555152 MFSD10Q14728 455 aa12.51□□□□□ -0.41
STRN3-206ENST00000555152 PTCD2Q8WV60 388 aaKnown RBP12.51□□□□□ -0.41
STRN3-206ENST00000555152 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
STRN3-206ENST00000555152 ERBB3P21860 1342 aa12.48□□□□□ -0.41
STRN3-206ENST00000555152 VARS2Q5ST30 1063 aaKnown RBP12.48□□□□□ -0.41
STRN3-206ENST00000555152 KRTAP3-3Q9BYR6 98 aa12.47□□□□□ -0.41
STRN3-206ENST00000555152 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
STRN3-206ENST00000555152 OXER1Q8TDS5 423 aa12.46□□□□□ -0.41
STRN3-206ENST00000555152 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
STRN3-206ENST00000555152 DDX27Q96GQ7 796 aaKnown RBP12.45□□□□□ -0.42
STRN3-206ENST00000555152 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.42
STRN3-206ENST00000555152 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
STRN3-206ENST00000555152 EMILIN3Q9NT22 766 aa12.43□□□□□ -0.42
STRN3-206ENST00000555152 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
STRN3-206ENST00000555152 POTEEQ6S8J3 1075 aa12.37□□□□□ -0.43
STRN3-206ENST00000555152 ZNF687Q8N1G0 1237 aa12.37□□□□□ -0.43
STRN3-206ENST00000555152 PLSCR2Q9NRY7 297 aa12.37□□□□□ -0.43
STRN3-206ENST00000555152 CAMK2BQ13554 666 aa12.35□□□□□ -0.43
STRN3-206ENST00000555152 TBC1D12O60347 775 aa12.31□□□□□ -0.44
STRN3-206ENST00000555152 SPNS2Q8IVW8 549 aa12.31□□□□□ -0.44
STRN3-206ENST00000555152 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
STRN3-206ENST00000555152 AXIN2Q9Y2T1 843 aa12.28□□□□□ -0.44
STRN3-206ENST00000555152 EVI5O60447 810 aa12.27□□□□□ -0.45
STRN3-206ENST00000555152 DPYSL4O14531 572 aa12.25□□□□□ -0.45
STRN3-206ENST00000555152 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
STRN3-206ENST00000555152 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
STRN3-206ENST00000555152 FOSBP53539 338 aa12.21□□□□□ -0.45
STRN3-206ENST00000555152 MMRN1Q13201 1228 aa12.2□□□□□ -0.46
STRN3-206ENST00000555152 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
STRN3-206ENST00000555152 PSDA5PKW4 1024 aaPredicted RBP12.18□□□□□ -0.46
STRN3-206ENST00000555152 PSEN2P49810 448 aa12.18□□□□□ -0.46
STRN3-206ENST00000555152 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.46
STRN3-206ENST00000555152 E2F4Q16254 413 aa12.18□□□□□ -0.46
STRN3-206ENST00000555152 DMRTA1Q5VZB9 504 aa12.18□□□□□ -0.46
STRN3-206ENST00000555152 PBX2P40425 430 aa12.16□□□□□ -0.46
STRN3-206ENST00000555152 PPP4R3BQ5MIZ7 849 aa12.16□□□□□ -0.46
STRN3-206ENST00000555152 ANKRD13DQ6ZTN6 518 aa12.16□□□□□ -0.46
STRN3-206ENST00000555152 ARHGAP33O14559 1287 aa12.15□□□□□ -0.46
STRN3-206ENST00000555152 JPH4Q96JJ6 628 aa12.15□□□□□ -0.46
STRN3-206ENST00000555152 PCDHGA10Q9Y5H3 936 aa12.15□□□□□ -0.46
STRN3-206ENST00000555152 ADAM33Q9BZ11 813 aa12.13□□□□□ -0.47
STRN3-206ENST00000555152 WDR70Q9NW82 654 aa12.13□□□□□ -0.47
STRN3-206ENST00000555152 ARIH1Q9Y4X5 557 aaPredicted RBP12.12□□□□□ -0.47
STRN3-206ENST00000555152 PDIA6Q15084 440 aa12.1□□□□□ -0.47
STRN3-206ENST00000555152 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
STRN3-206ENST00000555152 BCL2L12Q9HB09 334 aa12.1□□□□□ -0.47
STRN3-206ENST00000555152 DDX12PQ92771 950 aa12.09□□□□□ -0.47
STRN3-206ENST00000555152 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
STRN3-206ENST00000555152 PTGER2P43116 358 aa12.08□□□□□ -0.48
STRN3-206ENST00000555152 PRIM1P49642 420 aaKnown RBP12.07□□□□□ -0.48
STRN3-206ENST00000555152 KCNV2Q8TDN2 545 aa12.07□□□□□ -0.48
STRN3-206ENST00000555152 PHF14O94880 888 aa12.06□□□□□ -0.48
STRN3-206ENST00000555152 ADGRD1Q6QNK2 874 aa12.05□□□□□ -0.48
STRN3-206ENST00000555152 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
STRN3-206ENST00000555152 HRO43593 1189 aa12.03□□□□□ -0.48
STRN3-206ENST00000555152 COL9A1P20849 921 aa12.03□□□□□ -0.48
STRN3-206ENST00000555152 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
STRN3-206ENST00000555152 TYW1BQ6NUM6 668 aa12.02□□□□□ -0.49
STRN3-206ENST00000555152 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
STRN3-206ENST00000555152 VPS9D1Q9Y2B5 631 aa12.01□□□□□ -0.49
STRN3-206ENST00000555152 TK2O00142 265 aa12□□□□□ -0.49
STRN3-206ENST00000555152 PTPREP23469 700 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms