RNA–Protein interactions for RNA: ENST00000554996.5

CCDC85C-203, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 619 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-203ENST00000554996 PLCH2O75038 1416 aa16.72■□□□□ 0.27
CCDC85C-203ENST00000554996 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
CCDC85C-203ENST00000554996 ADAMTSL3P82987 1691 aa16.7■□□□□ 0.26
CCDC85C-203ENST00000554996 DENND4BO75064 1496 aaPredicted RBP16.7■□□□□ 0.26
CCDC85C-203ENST00000554996 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
CCDC85C-203ENST00000554996 POGZQ7Z3K3 1410 aa16.68■□□□□ 0.26
CCDC85C-203ENST00000554996 ARHGAP5Q13017 1502 aa16.67■□□□□ 0.26
CCDC85C-203ENST00000554996 YEATS2Q9ULM3 1422 aa16.67■□□□□ 0.26
CCDC85C-203ENST00000554996 ITSN2Q9NZM3 1697 aa16.66■□□□□ 0.26
CCDC85C-203ENST00000554996 MADDQ8WXG6 1647 aa16.66■□□□□ 0.26
CCDC85C-203ENST00000554996 ABCC1P33527 1531 aa16.65■□□□□ 0.26
CCDC85C-203ENST00000554996 ZFYVE16Q7Z3T8 1539 aa16.65■□□□□ 0.26
CCDC85C-203ENST00000554996 KDM5CP41229 1560 aa16.64■□□□□ 0.25
CCDC85C-203ENST00000554996 SCAPERQ9BY12 1400 aa16.63■□□□□ 0.25
CCDC85C-203ENST00000554996 ARHGEF12Q9NZN5 1544 aa16.62■□□□□ 0.25
CCDC85C-203ENST00000554996 SAMD9LQ8IVG5 1584 aa16.62■□□□□ 0.25
CCDC85C-203ENST00000554996 CDK11AQ9UQ88 783 aaPredicted RBP16.61■□□□□ 0.25
CCDC85C-203ENST00000554996 ABCA6Q8N139 1617 aa16.6■□□□□ 0.25
CCDC85C-203ENST00000554996 RIMS1Q86UR5 1692 aaKnown RBP16.6■□□□□ 0.25
CCDC85C-203ENST00000554996 HECW2Q9P2P5 1572 aa16.6■□□□□ 0.25
CCDC85C-203ENST00000554996 TIAM1Q13009 1591 aa16.58■□□□□ 0.24
CCDC85C-203ENST00000554996 DIP2CQ9Y2E4 1556 aa16.58■□□□□ 0.24
CCDC85C-203ENST00000554996 EHBP1L1Q8N3D4 1523 aa16.57■□□□□ 0.24
CCDC85C-203ENST00000554996 MAP3K1Q13233 1512 aa16.56■□□□□ 0.24
CCDC85C-203ENST00000554996 GPATCH8Q9UKJ3 1502 aaKnown RBP16.56■□□□□ 0.24
CCDC85C-203ENST00000554996 ZNF518AQ6AHZ1 1483 aa16.56■□□□□ 0.24
CCDC85C-203ENST00000554996 MAGI2Q86UL8 1455 aa16.56■□□□□ 0.24
CCDC85C-203ENST00000554996 TRAPPC8Q9Y2L5 1435 aa16.55■□□□□ 0.24
CCDC85C-203ENST00000554996 EFCAB2Q5VUJ9 269 aa16.55■□□□□ 0.24
CCDC85C-203ENST00000554996 FER1L4A9Z1Z3 1794 aa16.55■□□□□ 0.24
CCDC85C-203ENST00000554996 KIDINS220Q9ULH0 1771 aa16.55■□□□□ 0.24
CCDC85C-203ENST00000554996 SYCP2Q9BX26 1530 aa16.55■□□□□ 0.24
CCDC85C-203ENST00000554996 PTPRMP28827 1452 aa16.54■□□□□ 0.24
CCDC85C-203ENST00000554996 C9orf84Q5VXU9 1444 aa16.51■□□□□ 0.23
CCDC85C-203ENST00000554996 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
CCDC85C-203ENST00000554996 REREQ9P2R6 1566 aa16.5■□□□□ 0.23
CCDC85C-203ENST00000554996 ATP10AO60312 1499 aa16.49■□□□□ 0.23
CCDC85C-203ENST00000554996 MTUS2Q5JR59 1369 aa16.49■□□□□ 0.23
CCDC85C-203ENST00000554996 SUPT6HQ7KZ85 1726 aaKnown RBP16.48■□□□□ 0.23
CCDC85C-203ENST00000554996 INO80Q9ULG1 1556 aaPredicted RBP16.48■□□□□ 0.23
CCDC85C-203ENST00000554996 MLH3Q9UHC1 1453 aa16.48■□□□□ 0.23
CCDC85C-203ENST00000554996 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
CCDC85C-203ENST00000554996 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
CCDC85C-203ENST00000554996 NCOA2Q15596 1464 aa16.45■□□□□ 0.22
CCDC85C-203ENST00000554996 CCNB3Q8WWL7 1395 aa16.43■□□□□ 0.22
CCDC85C-203ENST00000554996 ATP7AQ04656 1500 aa16.43■□□□□ 0.22
CCDC85C-203ENST00000554996 LMTK3Q96Q04 1460 aa16.42■□□□□ 0.22
CCDC85C-203ENST00000554996 ZNF777Q9ULD5 760 aaPredicted RBP16.41■□□□□ 0.22
CCDC85C-203ENST00000554996 PLXNC1O60486 1568 aa16.41■□□□□ 0.22
CCDC85C-203ENST00000554996 ADGBQ8N7X0 1667 aa16.4■□□□□ 0.22
CCDC85C-203ENST00000554996 MLECQ14165 292 aa16.4■□□□□ 0.22
CCDC85C-203ENST00000554996 MBD5Q9P267 1494 aa16.4■□□□□ 0.22
CCDC85C-203ENST00000554996 ZNF644Q9H582 1327 aaPredicted RBP16.4■□□□□ 0.22
CCDC85C-203ENST00000554996 AGLP35573 1532 aa16.4■□□□□ 0.22
CCDC85C-203ENST00000554996 KIAA1107Q9UPP5 1409 aa16.39■□□□□ 0.21
CCDC85C-203ENST00000554996 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
CCDC85C-203ENST00000554996 C3P01024 1663 aa16.39■□□□□ 0.21
CCDC85C-203ENST00000554996 CAMSAP2Q08AD1 1489 aa16.38■□□□□ 0.21
CCDC85C-203ENST00000554996 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.218e-7■■■■□ 23
CCDC85C-203ENST00000554996 PLEKHH2Q8IVE3 1493 aa16.37■□□□□ 0.21
CCDC85C-203ENST00000554996 CFDP1Q9UEE9 299 aaPredicted RBP16.37■□□□□ 0.21
CCDC85C-203ENST00000554996 PREX1Q8TCU6 1659 aa16.34■□□□□ 0.21
CCDC85C-203ENST00000554996 APLP2Q06481 763 aa16.34■□□□□ 0.21
CCDC85C-203ENST00000554996 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
CCDC85C-203ENST00000554996 MYT1LQ9UL68 1186 aa16.32■□□□□ 0.2
CCDC85C-203ENST00000554996 CLTCQ00610 1675 aaKnown RBP16.31■□□□□ 0.2
CCDC85C-203ENST00000554996 ARHGEF5Q12774 1597 aa16.31■□□□□ 0.2
CCDC85C-203ENST00000554996 SPAG9O60271 1321 aaKnown RBP16.31■□□□□ 0.2
CCDC85C-203ENST00000554996 MROH2AA6NES4 1674 aa16.3■□□□□ 0.2
CCDC85C-203ENST00000554996 A2MP01023 1474 aa16.3■□□□□ 0.2
CCDC85C-203ENST00000554996 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
CCDC85C-203ENST00000554996 CEBPAP49715 358 aaPredicted RBP16.28■□□□□ 0.2
CCDC85C-203ENST00000554996 CROCC2H7BZ55 1655 aa16.27■□□□□ 0.2
CCDC85C-203ENST00000554996 MYOM3Q5VTT5 1437 aa16.25■□□□□ 0.19
CCDC85C-203ENST00000554996 MAST1Q9Y2H9 1570 aa16.25■□□□□ 0.19
CCDC85C-203ENST00000554996 HSPA2P54652 639 aa16.24■□□□□ 0.19
CCDC85C-203ENST00000554996 RTEL1-TNFRSF6BF6WH68 1400 aa16.24■□□□□ 0.19
CCDC85C-203ENST00000554996 STRCQ7RTU9 1775 aa16.23■□□□□ 0.19
CCDC85C-203ENST00000554996 ILDR1Q86SU0 546 aaPredicted RBP16.23■□□□□ 0.19
CCDC85C-203ENST00000554996 PTPN23Q9H3S7 1636 aa16.23■□□□□ 0.19
CCDC85C-203ENST00000554996 MIA2Q96PC5 1412 aa16.21■□□□□ 0.19
CCDC85C-203ENST00000554996 MYO3AQ8NEV4 1616 aa16.2■□□□□ 0.18
CCDC85C-203ENST00000554996 SETD1BQ9UPS6 1966 aaKnown RBP16.2■□□□□ 0.18
CCDC85C-203ENST00000554996 FGD6Q6ZV73 1430 aa16.19■□□□□ 0.18
CCDC85C-203ENST00000554996 CNTLNQ9NXG0 1405 aa16.19■□□□□ 0.18
CCDC85C-203ENST00000554996 ZNF142P52746 1687 aaPredicted RBP16.18■□□□□ 0.18
CCDC85C-203ENST00000554996 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
CCDC85C-203ENST00000554996 MROH1Q8NDA8 1641 aa16.18■□□□□ 0.18
CCDC85C-203ENST00000554996 RNF17Q9BXT8 1623 aaKnown RBP16.18■□□□□ 0.18
CCDC85C-203ENST00000554996 TCOF1Q13428 1488 aaKnown RBP16.17■□□□□ 0.18
CCDC85C-203ENST00000554996 DNMT1P26358 1616 aaKnown RBP16.17■□□□□ 0.18
CCDC85C-203ENST00000554996 DHX29Q7Z478 1369 aaKnown RBP16.16■□□□□ 0.18
CCDC85C-203ENST00000554996 UHRF1BP1Q6BDS2 1440 aa16.16■□□□□ 0.18
CCDC85C-203ENST00000554996 EIF2AK4Q9P2K8 1649 aaKnown RBP16.15■□□□□ 0.18
CCDC85C-203ENST00000554996 CEP152O94986 1710 aa16.14■□□□□ 0.17
CCDC85C-203ENST00000554996 KDM5DQ9BY66 1539 aa16.14■□□□□ 0.17
CCDC85C-203ENST00000554996 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
CCDC85C-203ENST00000554996 ABCC5O15440 1437 aa16.13■□□□□ 0.17
CCDC85C-203ENST00000554996 PTPRKQ15262 1439 aa16.13■□□□□ 0.17
CCDC85C-203ENST00000554996 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms