RNA–Protein interactions for RNA: ENST00000554902.5

PNN-204, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-204ENST00000554902 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.6
PNN-204ENST00000554902 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
PNN-204ENST00000554902 MARVELD3Q96A59 401 aa11.31□□□□□ -0.6
PNN-204ENST00000554902 HOXB3P14651 431 aaPredicted RBP11.29□□□□□ -0.6
PNN-204ENST00000554902 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
PNN-204ENST00000554902 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
PNN-204ENST00000554902 CFAP44Q96MT7 982 aa11.29□□□□□ -0.6
PNN-204ENST00000554902 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
PNN-204ENST00000554902 ZNF710Q8N1W2 664 aa11.27□□□□□ -0.61
PNN-204ENST00000554902 SPRYD3Q8NCJ5 442 aa11.27□□□□□ -0.61
PNN-204ENST00000554902 GTPBP6O43824 516 aaPredicted RBP11.25□□□□□ -0.61
PNN-204ENST00000554902 EMP3P54852 163 aa11.25□□□□□ -0.61
PNN-204ENST00000554902 PPP1R37O75864 691 aa11.23□□□□□ -0.61
PNN-204ENST00000554902 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
PNN-204ENST00000554902 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
PNN-204ENST00000554902 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
PNN-204ENST00000554902 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
PNN-204ENST00000554902 C2orf72A6NCS6 295 aa11.17□□□□□ -0.62
PNN-204ENST00000554902 KIF3CO14782 793 aa11.16□□□□□ -0.62
PNN-204ENST00000554902 HS3ST6Q96QI5 342 aa11.16□□□□□ -0.62
PNN-204ENST00000554902 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
PNN-204ENST00000554902 HAP1P54257 671 aaPredicted RBP11.15□□□□□ -0.62
PNN-204ENST00000554902 TMC2Q8TDI7 906 aa11.15□□□□□ -0.62
PNN-204ENST00000554902 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
PNN-204ENST00000554902 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
PNN-204ENST00000554902 GPR153Q6NV75 609 aa11.12□□□□□ -0.63
PNN-204ENST00000554902 ERBB3P21860 1342 aa11.11□□□□□ -0.63
PNN-204ENST00000554902 SLC24A1O60721 1099 aa11.11□□□□□ -0.63
PNN-204ENST00000554902 TSHZ2Q9NRE2 1034 aa11.1□□□□□ -0.63
PNN-204ENST00000554902 ARSIQ5FYB1 569 aa11.09□□□□□ -0.63
PNN-204ENST00000554902 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
PNN-204ENST00000554902 KHSRPQ92945 711 aaKnown RBP eCLIP11.04□□□□□ -0.641e-8■■■□□ 16.1
PNN-204ENST00000554902 SLC34A2O95436 690 aa11.03□□□□□ -0.64
PNN-204ENST00000554902 GPHNQ9NQX3 736 aaPredicted RBP11.03□□□□□ -0.64
PNN-204ENST00000554902 KRTAP3-3Q9BYR6 98 aa11.02□□□□□ -0.65
PNN-204ENST00000554902 KRTAP3-2Q9BYR7 98 aa11.02□□□□□ -0.65
PNN-204ENST00000554902 FOXK1P85037 733 aa11□□□□□ -0.65
PNN-204ENST00000554902 CADPS2Q86UW7 1296 aa11□□□□□ -0.65
PNN-204ENST00000554902 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
PNN-204ENST00000554902 PCDHGA4Q9Y5G9 962 aa11□□□□□ -0.65
PNN-204ENST00000554902 PLPP6Q8IY26 295 aa10.99□□□□□ -0.65
PNN-204ENST00000554902 ZNF316A6NFI3 1004 aaPredicted RBP10.98□□□□□ -0.65
PNN-204ENST00000554902 NUDT7P0C024 238 aa10.98□□□□□ -0.65
PNN-204ENST00000554902 DSG2Q14126 1118 aa10.97□□□□□ -0.65
PNN-204ENST00000554902 ZNF687Q8N1G0 1237 aa10.96□□□□□ -0.65
PNN-204ENST00000554902 MMRN1Q13201 1228 aa10.93□□□□□ -0.66
PNN-204ENST00000554902 PTCD2Q8WV60 388 aaKnown RBP10.93□□□□□ -0.66
PNN-204ENST00000554902 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
PNN-204ENST00000554902 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
PNN-204ENST00000554902 VSIG10Q8N0Z9 540 aa10.92□□□□□ -0.66
PNN-204ENST00000554902 LHX6Q9UPM6 363 aa10.92□□□□□ -0.66
PNN-204ENST00000554902 PDE4AP27815 886 aa10.91□□□□□ -0.66
PNN-204ENST00000554902 NCKAP5LQ9HCH0 1330 aa10.89□□□□□ -0.67
PNN-204ENST00000554902 TBC1D12O60347 775 aa10.89□□□□□ -0.67
PNN-204ENST00000554902 PPP1R15BQ5SWA1 713 aa10.88□□□□□ -0.67
PNN-204ENST00000554902 KDM4FA0A1W2PPD8 638 aa10.85□□□□□ -0.67
PNN-204ENST00000554902 LARP6Q9BRS8 491 aaKnown RBP10.85□□□□□ -0.67
PNN-204ENST00000554902 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
PNN-204ENST00000554902 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
PNN-204ENST00000554902 OXER1Q8TDS5 423 aa10.82□□□□□ -0.68
PNN-204ENST00000554902 DDX27Q96GQ7 796 aaKnown RBP10.82□□□□□ -0.68
PNN-204ENST00000554902 ANKRD13DQ6ZTN6 518 aa10.81□□□□□ -0.68
PNN-204ENST00000554902 PBX2P40425 430 aa10.8□□□□□ -0.68
PNN-204ENST00000554902 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
PNN-204ENST00000554902 LSM11P83369 360 aaKnown RBP eCLIP10.78□□□□□ -0.68
PNN-204ENST00000554902 MFSD10Q14728 455 aa10.78□□□□□ -0.68
PNN-204ENST00000554902 AXIN2Q9Y2T1 843 aa10.78□□□□□ -0.68
PNN-204ENST00000554902 POTEEQ6S8J3 1075 aa10.77□□□□□ -0.69
PNN-204ENST00000554902 PPP4R3BQ5MIZ7 849 aa10.75□□□□□ -0.69
PNN-204ENST00000554902 ARHGAP33O14559 1287 aa10.74□□□□□ -0.69
PNN-204ENST00000554902 MYT1LQ9UL68 1186 aa10.74□□□□□ -0.69
PNN-204ENST00000554902 PTGER2P43116 358 aa10.72□□□□□ -0.69
PNN-204ENST00000554902 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
PNN-204ENST00000554902 MAP3K9P80192 1104 aa10.71□□□□□ -0.69
PNN-204ENST00000554902 EVI5O60447 810 aa10.7□□□□□ -0.7
PNN-204ENST00000554902 E2F4Q16254 413 aa10.7□□□□□ -0.7
PNN-204ENST00000554902 EMILIN3Q9NT22 766 aa10.7□□□□□ -0.7
PNN-204ENST00000554902 ZNF454Q8N9F8 522 aa10.69□□□□□ -0.7
PNN-204ENST00000554902 KCNV2Q8TDN2 545 aa10.69□□□□□ -0.7
PNN-204ENST00000554902 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
PNN-204ENST00000554902 PSEN2P49810 448 aa10.68□□□□□ -0.7
PNN-204ENST00000554902 CAMK2BQ13554 666 aa10.66□□□□□ -0.7
PNN-204ENST00000554902 DMRTA1Q5VZB9 504 aa10.66□□□□□ -0.7
PNN-204ENST00000554902 FOSBP53539 338 aa10.65□□□□□ -0.7
PNN-204ENST00000554902 ADGRD1Q6QNK2 874 aa10.65□□□□□ -0.7
PNN-204ENST00000554902 P3H3Q8IVL6 736 aa10.65□□□□□ -0.7
PNN-204ENST00000554902 KCNH8Q96L42 1107 aa10.65□□□□□ -0.7
PNN-204ENST00000554902 KCNK17Q96T54 332 aa10.64□□□□□ -0.71
PNN-204ENST00000554902 JPH4Q96JJ6 628 aa10.63□□□□□ -0.71
PNN-204ENST00000554902 TK2O00142 265 aa10.62□□□□□ -0.71
PNN-204ENST00000554902 BCL2L12Q9HB09 334 aa10.61□□□□□ -0.71
PNN-204ENST00000554902 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
PNN-204ENST00000554902 DPYSL4O14531 572 aa10.58□□□□□ -0.72
PNN-204ENST00000554902 PTPREP23469 700 aa10.58□□□□□ -0.72
PNN-204ENST00000554902 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
PNN-204ENST00000554902 HRO43593 1189 aa10.57□□□□□ -0.72
PNN-204ENST00000554902 STAC3Q96MF2 364 aa10.56□□□□□ -0.72
PNN-204ENST00000554902 ADAM33Q9BZ11 813 aa10.56□□□□□ -0.72
PNN-204ENST00000554902 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
PNN-204ENST00000554902 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms