RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
LINC01550-204ENST00000554822 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
LINC01550-204ENST00000554822 C2orf72A6NCS6 295 aa12.26□□□□□ -0.45
LINC01550-204ENST00000554822 POTEMA6NI47 508 aa12.25□□□□□ -0.45
LINC01550-204ENST00000554822 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
LINC01550-204ENST00000554822 KIF3CO14782 793 aa12.24□□□□□ -0.45
LINC01550-204ENST00000554822 LCE2DQ5TA82 110 aaPredicted RBP12.24□□□□□ -0.45
LINC01550-204ENST00000554822 POTEGQ6S5H5 508 aa12.23□□□□□ -0.45
LINC01550-204ENST00000554822 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.45
LINC01550-204ENST00000554822 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
LINC01550-204ENST00000554822 TSHZ2Q9NRE2 1034 aa12.21□□□□□ -0.45
LINC01550-204ENST00000554822 CRISPLD2Q9H0B8 497 aa12.19□□□□□ -0.46
LINC01550-204ENST00000554822 PDE4AP27815 886 aa12.18□□□□□ -0.46
LINC01550-204ENST00000554822 LARP6Q9BRS8 491 aaKnown RBP12.17□□□□□ -0.46
LINC01550-204ENST00000554822 DSG2Q14126 1118 aa12.16□□□□□ -0.46
LINC01550-204ENST00000554822 SNPHO15079 494 aa12.14□□□□□ -0.47
LINC01550-204ENST00000554822 FOXK1P85037 733 aa12.14□□□□□ -0.47
LINC01550-204ENST00000554822 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
LINC01550-204ENST00000554822 HAP1P54257 671 aaPredicted RBP12.13□□□□□ -0.47
LINC01550-204ENST00000554822 PLPP6Q8IY26 295 aa12.12□□□□□ -0.47
LINC01550-204ENST00000554822 PPP1R15BQ5SWA1 713 aa12.1□□□□□ -0.47
LINC01550-204ENST00000554822 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
LINC01550-204ENST00000554822 MFSD10Q14728 455 aa12.09□□□□□ -0.47
LINC01550-204ENST00000554822 DOK7Q18PE1 504 aa12.09□□□□□ -0.47
LINC01550-204ENST00000554822 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
LINC01550-204ENST00000554822 ST18O60284 1047 aa12.07□□□□□ -0.48
LINC01550-204ENST00000554822 ZNF710Q8N1W2 664 aa12.06□□□□□ -0.48
LINC01550-204ENST00000554822 RIMBP2O15034 1052 aa12.02□□□□□ -0.49
LINC01550-204ENST00000554822 WDR70Q9NW82 654 aa12.02□□□□□ -0.49
LINC01550-204ENST00000554822 SLC34A2O95436 690 aa12.01□□□□□ -0.49
LINC01550-204ENST00000554822 ARSIQ5FYB1 569 aa11.99□□□□□ -0.49
LINC01550-204ENST00000554822 GPR153Q6NV75 609 aa11.98□□□□□ -0.49
LINC01550-204ENST00000554822 UPF1Q92900 1129 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC01550-204ENST00000554822 KHSRPQ92945 711 aaKnown RBP eCLIP11.98□□□□□ -0.49
LINC01550-204ENST00000554822 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
LINC01550-204ENST00000554822 PCDHGA4Q9Y5G9 962 aa11.98□□□□□ -0.49
LINC01550-204ENST00000554822 MARVELD3Q96A59 401 aa11.97□□□□□ -0.49
LINC01550-204ENST00000554822 HOXB1P14653 301 aaPredicted RBP11.96□□□□□ -0.49
LINC01550-204ENST00000554822 PTCD2Q8WV60 388 aaKnown RBP11.96□□□□□ -0.49
LINC01550-204ENST00000554822 EMILIN3Q9NT22 766 aa11.96□□□□□ -0.49
LINC01550-204ENST00000554822 PCDH10Q9P2E7 1040 aa11.96□□□□□ -0.49
LINC01550-204ENST00000554822 CAMK2BQ13554 666 aa11.94□□□□□ -0.5
LINC01550-204ENST00000554822 OXER1Q8TDS5 423 aa11.94□□□□□ -0.5
LINC01550-204ENST00000554822 E2F4Q16254 413 aa11.93□□□□□ -0.5
LINC01550-204ENST00000554822 KDM2AQ9Y2K7 1162 aa11.93□□□□□ -0.5
LINC01550-204ENST00000554822 TBC1D12O60347 775 aa11.91□□□□□ -0.5
LINC01550-204ENST00000554822 NUDT7P0C024 238 aa11.91□□□□□ -0.5
LINC01550-204ENST00000554822 CDAN1Q8IWY9 1227 aa11.91□□□□□ -0.5
LINC01550-204ENST00000554822 EMP3P54852 163 aa11.9□□□□□ -0.5
LINC01550-204ENST00000554822 MAP3K9P80192 1104 aa11.89□□□□□ -0.51
LINC01550-204ENST00000554822 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
LINC01550-204ENST00000554822 DPYSL4O14531 572 aa11.86□□□□□ -0.51
LINC01550-204ENST00000554822 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
LINC01550-204ENST00000554822 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
LINC01550-204ENST00000554822 ERBB3P21860 1342 aa11.84□□□□□ -0.51
LINC01550-204ENST00000554822 EVI5O60447 810 aa11.83□□□□□ -0.52
LINC01550-204ENST00000554822 LHX6Q9UPM6 363 aa11.83□□□□□ -0.52
LINC01550-204ENST00000554822 KCNV2Q8TDN2 545 aa11.82□□□□□ -0.52
LINC01550-204ENST00000554822 POTEB3A0JP26 581 aa11.81□□□□□ -0.52
LINC01550-204ENST00000554822 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
LINC01550-204ENST00000554822 POTEBQ6S5H4 581 aa11.81□□□□□ -0.52
LINC01550-204ENST00000554822 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
LINC01550-204ENST00000554822 HS3ST6Q96QI5 342 aa11.8□□□□□ -0.52
LINC01550-204ENST00000554822 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
LINC01550-204ENST00000554822 ARIH1Q9Y4X5 557 aaPredicted RBP11.77□□□□□ -0.53
LINC01550-204ENST00000554822 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
LINC01550-204ENST00000554822 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
LINC01550-204ENST00000554822 PDIA6Q15084 440 aa11.73□□□□□ -0.53
LINC01550-204ENST00000554822 SPDYE16A6NNV3 312 aaPredicted RBP11.71□□□□□ -0.53
LINC01550-204ENST00000554822 SLC24A1O60721 1099 aa11.7□□□□□ -0.54
LINC01550-204ENST00000554822 ZNF454Q8N9F8 522 aa11.7□□□□□ -0.54
LINC01550-204ENST00000554822 PSDA5PKW4 1024 aaPredicted RBP11.68□□□□□ -0.54
LINC01550-204ENST00000554822 ZNF687Q8N1G0 1237 aa11.68□□□□□ -0.54
LINC01550-204ENST00000554822 DDX12PQ92771 950 aa11.68□□□□□ -0.54
LINC01550-204ENST00000554822 FOSBP53539 338 aa11.67□□□□□ -0.54
LINC01550-204ENST00000554822 PTGER2P43116 358 aa11.66□□□□□ -0.54
LINC01550-204ENST00000554822 PPP4R3BQ5MIZ7 849 aa11.66□□□□□ -0.54
LINC01550-204ENST00000554822 JPH4Q96JJ6 628 aa11.66□□□□□ -0.54
LINC01550-204ENST00000554822 PCDHGA10Q9Y5H3 936 aa11.66□□□□□ -0.54
LINC01550-204ENST00000554822 GRXCR2A6NFK2 248 aa11.63□□□□□ -0.55
LINC01550-204ENST00000554822 PHF14O94880 888 aa11.63□□□□□ -0.55
LINC01550-204ENST00000554822 SEMA3EO15041 775 aa11.62□□□□□ -0.55
LINC01550-204ENST00000554822 POTEEQ6S8J3 1075 aa11.62□□□□□ -0.55
LINC01550-204ENST00000554822 KRTAP3-3Q9BYR6 98 aa11.62□□□□□ -0.55
LINC01550-204ENST00000554822 KRTAP3-2Q9BYR7 98 aa11.62□□□□□ -0.55
LINC01550-204ENST00000554822 AXIN2Q9Y2T1 843 aa11.62□□□□□ -0.55
LINC01550-204ENST00000554822 SPNS2Q8IVW8 549 aa11.61□□□□□ -0.55
LINC01550-204ENST00000554822 ZDHHC16Q969W1 377 aa11.61□□□□□ -0.55
LINC01550-204ENST00000554822 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
LINC01550-204ENST00000554822 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
LINC01550-204ENST00000554822 NBR1Q14596 966 aa11.59□□□□□ -0.55
LINC01550-204ENST00000554822 TYW1BQ6NUM6 668 aa11.59□□□□□ -0.55
LINC01550-204ENST00000554822 RBM33Q96EV2 1170 aaKnown RBP11.58□□□□□ -0.56
LINC01550-204ENST00000554822 EPAS1Q99814 870 aa11.58□□□□□ -0.56
LINC01550-204ENST00000554822 PSEN2P49810 448 aa11.57□□□□□ -0.56
LINC01550-204ENST00000554822 ARHGAP33O14559 1287 aa11.56□□□□□ -0.56
LINC01550-204ENST00000554822 PBX2P40425 430 aa11.56□□□□□ -0.56
LINC01550-204ENST00000554822 MMRN1Q13201 1228 aa11.56□□□□□ -0.56
LINC01550-204ENST00000554822 FBXW7Q969H0 707 aa11.56□□□□□ -0.56
LINC01550-204ENST00000554822 KCNK17Q96T54 332 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms