RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 NEO1Q92859 1461 aa12.54□□□□□ -0.4
LINC01397-201ENST00000554808 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
LINC01397-201ENST00000554808 PHLDB1Q86UU1 1377 aa12.54□□□□□ -0.4
LINC01397-201ENST00000554808 ARHGAP5Q13017 1502 aa12.53□□□□□ -0.4
LINC01397-201ENST00000554808 PLCH2O75038 1416 aa12.53□□□□□ -0.4
LINC01397-201ENST00000554808 CCNB3Q8WWL7 1395 aa12.52□□□□□ -0.41
LINC01397-201ENST00000554808 HECW2Q9P2P5 1572 aa12.52□□□□□ -0.41
LINC01397-201ENST00000554808 FANCAO15360 1455 aa12.51□□□□□ -0.41
LINC01397-201ENST00000554808 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
LINC01397-201ENST00000554808 RICTORQ6R327 1708 aa12.5□□□□□ -0.41
LINC01397-201ENST00000554808 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
LINC01397-201ENST00000554808 MYOM3Q5VTT5 1437 aa12.49□□□□□ -0.41
LINC01397-201ENST00000554808 MIA2Q96PC5 1412 aa12.49□□□□□ -0.41
LINC01397-201ENST00000554808 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
LINC01397-201ENST00000554808 SAMD9LQ8IVG5 1584 aa12.48□□□□□ -0.41
LINC01397-201ENST00000554808 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
LINC01397-201ENST00000554808 ABCC1P33527 1531 aa12.47□□□□□ -0.41
LINC01397-201ENST00000554808 CROCC2H7BZ55 1655 aa12.47□□□□□ -0.41
LINC01397-201ENST00000554808 EFCAB2Q5VUJ9 269 aa12.46□□□□□ -0.41
LINC01397-201ENST00000554808 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
LINC01397-201ENST00000554808 ARHGEF5Q12774 1597 aa12.44□□□□□ -0.42
LINC01397-201ENST00000554808 CAMSAP2Q08AD1 1489 aa12.43□□□□□ -0.42
LINC01397-201ENST00000554808 CFDP1Q9UEE9 299 aaPredicted RBP12.43□□□□□ -0.42
LINC01397-201ENST00000554808 FGD6Q6ZV73 1430 aa12.43□□□□□ -0.42
LINC01397-201ENST00000554808 KIAA1107Q9UPP5 1409 aa12.43□□□□□ -0.42
LINC01397-201ENST00000554808 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
LINC01397-201ENST00000554808 ADGBQ8N7X0 1667 aa12.42□□□□□ -0.42
LINC01397-201ENST00000554808 TCOF1Q13428 1488 aaKnown RBP12.42□□□□□ -0.42
LINC01397-201ENST00000554808 ZNF518AQ6AHZ1 1483 aa12.42□□□□□ -0.42
LINC01397-201ENST00000554808 DNMT1P26358 1616 aaKnown RBP12.42□□□□□ -0.42
LINC01397-201ENST00000554808 ILDR1Q86SU0 546 aaPredicted RBP12.42□□□□□ -0.42
LINC01397-201ENST00000554808 KDM5CP41229 1560 aa12.42□□□□□ -0.42
LINC01397-201ENST00000554808 SYCP2Q9BX26 1530 aa12.42□□□□□ -0.42
LINC01397-201ENST00000554808 DENND4BO75064 1496 aaPredicted RBP12.41□□□□□ -0.42
LINC01397-201ENST00000554808 FRMPD1Q5SYB0 1578 aa12.4□□□□□ -0.42
LINC01397-201ENST00000554808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.43
LINC01397-201ENST00000554808 MAST1Q9Y2H9 1570 aa12.39□□□□□ -0.43
LINC01397-201ENST00000554808 POGZQ7Z3K3 1410 aa12.38□□□□□ -0.43
LINC01397-201ENST00000554808 RSPH4AQ5TD94 716 aa12.38□□□□□ -0.43
LINC01397-201ENST00000554808 SCAPERQ9BY12 1400 aa12.37□□□□□ -0.43
LINC01397-201ENST00000554808 RRBP1Q9P2E9 1410 aaKnown RBP12.37□□□□□ -0.43
LINC01397-201ENST00000554808 CCDC141Q6ZP82 1450 aa12.37□□□□□ -0.43
LINC01397-201ENST00000554808 MAGI2Q86UL8 1455 aa12.37□□□□□ -0.43
LINC01397-201ENST00000554808 INO80Q9ULG1 1556 aaPredicted RBP12.37□□□□□ -0.43
LINC01397-201ENST00000554808 KIDINS220Q9ULH0 1771 aa12.37□□□□□ -0.43
LINC01397-201ENST00000554808 SHANK2Q9UPX8 1470 aa12.36□□□□□ -0.43
LINC01397-201ENST00000554808 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
LINC01397-201ENST00000554808 ZNF777Q9ULD5 760 aaPredicted RBP12.35□□□□□ -0.43
LINC01397-201ENST00000554808 ARHGEF40Q8TER5 1519 aa12.35□□□□□ -0.43
LINC01397-201ENST00000554808 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
LINC01397-201ENST00000554808 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
LINC01397-201ENST00000554808 ARHGEF12Q9NZN5 1544 aa12.34□□□□□ -0.43
LINC01397-201ENST00000554808 ADAMTSL3P82987 1691 aa12.34□□□□□ -0.43
LINC01397-201ENST00000554808 MLH3Q9UHC1 1453 aa12.34□□□□□ -0.43
LINC01397-201ENST00000554808 ZFYVE16Q7Z3T8 1539 aa12.33□□□□□ -0.44
LINC01397-201ENST00000554808 REREQ9P2R6 1566 aa12.32□□□□□ -0.44
LINC01397-201ENST00000554808 RTEL1-TNFRSF6BF6WH68 1400 aa12.32□□□□□ -0.44
LINC01397-201ENST00000554808 ABCA6Q8N139 1617 aa12.32□□□□□ -0.44
LINC01397-201ENST00000554808 DAPK1P53355 1430 aa12.31□□□□□ -0.44
LINC01397-201ENST00000554808 BCORL1Q5H9F3 1711 aa12.31□□□□□ -0.44
LINC01397-201ENST00000554808 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
LINC01397-201ENST00000554808 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
LINC01397-201ENST00000554808 DIP2CQ9Y2E4 1556 aa12.3□□□□□ -0.44
LINC01397-201ENST00000554808 EIF2AK4Q9P2K8 1649 aaKnown RBP12.29□□□□□ -0.44
LINC01397-201ENST00000554808 GCC2Q8IWJ2 1684 aa12.29□□□□□ -0.44
LINC01397-201ENST00000554808 MADDQ8WXG6 1647 aa12.29□□□□□ -0.44
LINC01397-201ENST00000554808 TSPY4P0CV99 314 aa12.28□□□□□ -0.44
LINC01397-201ENST00000554808 TSPY10P0CW01 314 aa12.28□□□□□ -0.44
LINC01397-201ENST00000554808 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
LINC01397-201ENST00000554808 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
LINC01397-201ENST00000554808 ADGRL2O95490 1459 aa12.27□□□□□ -0.44
LINC01397-201ENST00000554808 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC01397-201ENST00000554808 FAM50AQ14320 339 aaKnown RBP12.27□□□□□ -0.45
LINC01397-201ENST00000554808 SPAG9O60271 1321 aaKnown RBP12.27□□□□□ -0.45
LINC01397-201ENST00000554808 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
LINC01397-201ENST00000554808 ABCC5O15440 1437 aa12.26□□□□□ -0.45
LINC01397-201ENST00000554808 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
LINC01397-201ENST00000554808 SIGLEC1Q9BZZ2 1709 aa12.25□□□□□ -0.45
LINC01397-201ENST00000554808 ATP10AO60312 1499 aa12.24□□□□□ -0.45
LINC01397-201ENST00000554808 PTPRMP28827 1452 aa12.24□□□□□ -0.45
LINC01397-201ENST00000554808 AFAP1Q8N556 730 aa12.24□□□□□ -0.45
LINC01397-201ENST00000554808 DUOX2Q9NRD8 1548 aa12.24□□□□□ -0.45
LINC01397-201ENST00000554808 AGLP35573 1532 aa12.23□□□□□ -0.45
LINC01397-201ENST00000554808 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
LINC01397-201ENST00000554808 ANKRD30AQ9BXX3 1397 aa12.23□□□□□ -0.45
LINC01397-201ENST00000554808 MYT1LQ9UL68 1186 aa12.22□□□□□ -0.45
LINC01397-201ENST00000554808 ZC3H13Q5T200 1668 aaKnown RBP12.22□□□□□ -0.45
LINC01397-201ENST00000554808 FAM135AQ9P2D6 1515 aa12.21□□□□□ -0.45
LINC01397-201ENST00000554808 YEATS2Q9ULM3 1422 aa12.21□□□□□ -0.45
LINC01397-201ENST00000554808 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.45
LINC01397-201ENST00000554808 DEPDC5O75140 1603 aa12.21□□□□□ -0.46
LINC01397-201ENST00000554808 RNF17Q9BXT8 1623 aaKnown RBP12.21□□□□□ -0.46
LINC01397-201ENST00000554808 A2MP01023 1474 aa12.21□□□□□ -0.46
LINC01397-201ENST00000554808 NCOA1Q15788 1441 aa12.2□□□□□ -0.46
LINC01397-201ENST00000554808 ERBINQ96RT1 1412 aa12.2□□□□□ -0.46
LINC01397-201ENST00000554808 LMTK3Q96Q04 1460 aa12.19□□□□□ -0.46
LINC01397-201ENST00000554808 KIF15Q9NS87 1388 aa12.18□□□□□ -0.46
LINC01397-201ENST00000554808 MROH2AA6NES4 1674 aa12.18□□□□□ -0.46
LINC01397-201ENST00000554808 UNC13BO14795 1591 aa12.17□□□□□ -0.46
LINC01397-201ENST00000554808 DHX29Q7Z478 1369 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms