RNA–Protein interactions for RNA: ENST00000554707.1

PCNX1-208, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-208ENST00000554707 C3orf67Q6ZVT6 689 aa11.15□□□□□ -0.62
PCNX1-208ENST00000554707 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
PCNX1-208ENST00000554707 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.14□□□□□ -0.63
PCNX1-208ENST00000554707 CRISPLD2Q9H0B8 497 aa11.13□□□□□ -0.63
PCNX1-208ENST00000554707 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
PCNX1-208ENST00000554707 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
PCNX1-208ENST00000554707 NCKAP5LQ9HCH0 1330 aa11.09□□□□□ -0.63
PCNX1-208ENST00000554707 KIF3CO14782 793 aa11.09□□□□□ -0.63
PCNX1-208ENST00000554707 TMC2Q8TDI7 906 aa11.09□□□□□ -0.63
PCNX1-208ENST00000554707 MFSD10Q14728 455 aa11.08□□□□□ -0.64
PCNX1-208ENST00000554707 KDM2AQ9Y2K7 1162 aa11.08□□□□□ -0.64
PCNX1-208ENST00000554707 WDR70Q9NW82 654 aa11.07□□□□□ -0.64
PCNX1-208ENST00000554707 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
PCNX1-208ENST00000554707 FOXK1P85037 733 aa11.05□□□□□ -0.64
PCNX1-208ENST00000554707 TMEM92Q6UXU6 159 aa11.05□□□□□ -0.64
PCNX1-208ENST00000554707 C2orf72A6NCS6 295 aa11.04□□□□□ -0.64
PCNX1-208ENST00000554707 DDX27Q96GQ7 796 aaKnown RBP11.04□□□□□ -0.64
PCNX1-208ENST00000554707 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
PCNX1-208ENST00000554707 POTEMA6NI47 508 aa11□□□□□ -0.65
PCNX1-208ENST00000554707 PPP1R15BQ5SWA1 713 aa11□□□□□ -0.65
PCNX1-208ENST00000554707 SLAIN1Q8ND83 568 aa11□□□□□ -0.65
PCNX1-208ENST00000554707 DSG2Q14126 1118 aa10.99□□□□□ -0.65
PCNX1-208ENST00000554707 POTEGQ6S5H5 508 aa10.97□□□□□ -0.65
PCNX1-208ENST00000554707 PLPP6Q8IY26 295 aa10.97□□□□□ -0.65
PCNX1-208ENST00000554707 CAMK2BQ13554 666 aa10.96□□□□□ -0.65
PCNX1-208ENST00000554707 E2F4Q16254 413 aa10.96□□□□□ -0.65
PCNX1-208ENST00000554707 P3H3Q8IVL6 736 aa10.95□□□□□ -0.66
PCNX1-208ENST00000554707 SNPHO15079 494 aa10.92□□□□□ -0.66
PCNX1-208ENST00000554707 SLC34A2O95436 690 aa10.92□□□□□ -0.66
PCNX1-208ENST00000554707 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
PCNX1-208ENST00000554707 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
PCNX1-208ENST00000554707 FAM163AQ96GL9 167 aaPredicted RBP10.89□□□□□ -0.67
PCNX1-208ENST00000554707 ARHGEF1Q92888 912 aaKnown RBP10.88□□□□□ -0.67
PCNX1-208ENST00000554707 DOK7Q18PE1 504 aa10.87□□□□□ -0.67
PCNX1-208ENST00000554707 PTCD2Q8WV60 388 aaKnown RBP10.86□□□□□ -0.67
PCNX1-208ENST00000554707 TBC1D12O60347 775 aa10.85□□□□□ -0.67
PCNX1-208ENST00000554707 KCNV2Q8TDN2 545 aa10.85□□□□□ -0.67
PCNX1-208ENST00000554707 OXER1Q8TDS5 423 aa10.85□□□□□ -0.67
PCNX1-208ENST00000554707 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
PCNX1-208ENST00000554707 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
PCNX1-208ENST00000554707 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
PCNX1-208ENST00000554707 HOXB3P14651 431 aaPredicted RBP10.84□□□□□ -0.67
PCNX1-208ENST00000554707 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
PCNX1-208ENST00000554707 SPDYE16A6NNV3 312 aaPredicted RBP10.8□□□□□ -0.68
PCNX1-208ENST00000554707 MAP3K9P80192 1104 aa10.8□□□□□ -0.68
PCNX1-208ENST00000554707 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
PCNX1-208ENST00000554707 PCDHGA4Q9Y5G9 962 aa10.77□□□□□ -0.69
PCNX1-208ENST00000554707 DPYSL4O14531 572 aa10.76□□□□□ -0.69
PCNX1-208ENST00000554707 GPR153Q6NV75 609 aa10.76□□□□□ -0.69
PCNX1-208ENST00000554707 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.69
PCNX1-208ENST00000554707 PDIA6Q15084 440 aa10.74□□□□□ -0.69
PCNX1-208ENST00000554707 ANO8Q9HCE9 1232 aaPredicted RBP10.74□□□□□ -0.69
PCNX1-208ENST00000554707 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
PCNX1-208ENST00000554707 BCANQ96GW7 911 aa10.73□□□□□ -0.69
PCNX1-208ENST00000554707 HOXB1P14653 301 aaPredicted RBP10.72□□□□□ -0.69
PCNX1-208ENST00000554707 NBR1Q14596 966 aa10.72□□□□□ -0.69
PCNX1-208ENST00000554707 KDM4FA0A1W2PPD8 638 aa10.71□□□□□ -0.69
PCNX1-208ENST00000554707 EVI5O60447 810 aa10.71□□□□□ -0.69
PCNX1-208ENST00000554707 ARSIQ5FYB1 569 aa10.71□□□□□ -0.69
PCNX1-208ENST00000554707 PTGER2P43116 358 aa10.7□□□□□ -0.7
PCNX1-208ENST00000554707 ST18O60284 1047 aa10.69□□□□□ -0.7
PCNX1-208ENST00000554707 TESPA1A2RU30 521 aaPredicted RBP10.65□□□□□ -0.7
PCNX1-208ENST00000554707 NUDT7P0C024 238 aa10.65□□□□□ -0.7
PCNX1-208ENST00000554707 SMYD5Q6GMV2 418 aa10.64□□□□□ -0.71
PCNX1-208ENST00000554707 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
PCNX1-208ENST00000554707 SEMA3EO15041 775 aa10.63□□□□□ -0.71
PCNX1-208ENST00000554707 KHSRPQ92945 711 aaKnown RBP eCLIP10.63□□□□□ -0.71
PCNX1-208ENST00000554707 TULP1O00294 542 aaPredicted RBP10.61□□□□□ -0.71
PCNX1-208ENST00000554707 CDAN1Q8IWY9 1227 aa10.61□□□□□ -0.71
PCNX1-208ENST00000554707 PHF14O94880 888 aa10.6□□□□□ -0.71
PCNX1-208ENST00000554707 EPAS1Q99814 870 aa10.6□□□□□ -0.71
PCNX1-208ENST00000554707 JPH4Q96JJ6 628 aa10.59□□□□□ -0.71
PCNX1-208ENST00000554707 LHX6Q9UPM6 363 aa10.59□□□□□ -0.71
PCNX1-208ENST00000554707 FOSBP53539 338 aa10.58□□□□□ -0.72
PCNX1-208ENST00000554707 MLLT3P42568 568 aaPredicted RBP10.56□□□□□ -0.72
PCNX1-208ENST00000554707 GRXCR2A6NFK2 248 aa10.55□□□□□ -0.72
PCNX1-208ENST00000554707 EMP3P54852 163 aa10.55□□□□□ -0.72
PCNX1-208ENST00000554707 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
PCNX1-208ENST00000554707 DDX12PQ92771 950 aa10.55□□□□□ -0.72
PCNX1-208ENST00000554707 FBXW7Q969H0 707 aa10.55□□□□□ -0.72
PCNX1-208ENST00000554707 PCDHGA10Q9Y5H3 936 aa10.55□□□□□ -0.72
PCNX1-208ENST00000554707 PPP4R3BQ5MIZ7 849 aa10.54□□□□□ -0.72
PCNX1-208ENST00000554707 ERBB3P21860 1342 aa10.54□□□□□ -0.72
PCNX1-208ENST00000554707 OSBPP22059 807 aa10.53□□□□□ -0.72
PCNX1-208ENST00000554707 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.53□□□□□ -0.72
PCNX1-208ENST00000554707 ZNF454Q8N9F8 522 aa10.53□□□□□ -0.72
PCNX1-208ENST00000554707 ZDHHC16Q969W1 377 aa10.52□□□□□ -0.73
PCNX1-208ENST00000554707 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
PCNX1-208ENST00000554707 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
PCNX1-208ENST00000554707 EN1Q05925 392 aaPredicted RBP10.48□□□□□ -0.73
PCNX1-208ENST00000554707 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
PCNX1-208ENST00000554707 ZNF687Q8N1G0 1237 aa10.47□□□□□ -0.73
PCNX1-208ENST00000554707 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
PCNX1-208ENST00000554707 LMOD2Q6P5Q4 547 aa10.46□□□□□ -0.73
PCNX1-208ENST00000554707 HS3ST6Q96QI5 342 aa10.45□□□□□ -0.74
PCNX1-208ENST00000554707 MAP3K7O43318 606 aa10.44□□□□□ -0.74
PCNX1-208ENST00000554707 PBX2P40425 430 aa10.44□□□□□ -0.74
PCNX1-208ENST00000554707 C6orf132Q5T0Z8 1188 aa10.44□□□□□ -0.74
PCNX1-208ENST00000554707 ADAM33Q9BZ11 813 aa10.44□□□□□ -0.74
PCNX1-208ENST00000554707 CERKQ8TCT0 537 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms