RNA–Protein interactions for RNA: ENST00000554628.5

PTPN21-206, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 1,571 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-206ENST00000554628 PHLDB1Q86UU1 1377 aa28.48■■■□□ 2.15
PTPN21-206ENST00000554628 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
PTPN21-206ENST00000554628 AKNAQ7Z591 1439 aa28.45■■■□□ 2.15
PTPN21-206ENST00000554628 NCOA2Q15596 1464 aa28.45■■■□□ 2.14
PTPN21-206ENST00000554628 GPATCH8Q9UKJ3 1502 aaKnown RBP28.44■■■□□ 2.14
PTPN21-206ENST00000554628 EFCAB2Q5VUJ9 269 aa28.43■■■□□ 2.14
PTPN21-206ENST00000554628 CCNB3Q8WWL7 1395 aa28.43■■■□□ 2.14
PTPN21-206ENST00000554628 ITSN2Q9NZM3 1697 aa28.39■■■□□ 2.14
PTPN21-206ENST00000554628 ADGRL1O94910 1474 aa28.38■■■□□ 2.13
PTPN21-206ENST00000554628 RAPGEF3O95398 923 aa28.33■■■□□ 2.13
PTPN21-206ENST00000554628 CFDP1Q9UEE9 299 aaPredicted RBP28.33■■■□□ 2.13
PTPN21-206ENST00000554628 DENND4BO75064 1496 aaPredicted RBP28.33■■■□□ 2.13
PTPN21-206ENST00000554628 RICTORQ6R327 1708 aa28.33■■■□□ 2.13
PTPN21-206ENST00000554628 SCAPERQ9BY12 1400 aa28.33■■■□□ 2.13
PTPN21-206ENST00000554628 FRMPD1Q5SYB0 1578 aa28.32■■■□□ 2.12
PTPN21-206ENST00000554628 SAMD9LQ8IVG5 1584 aa28.32■■■□□ 2.12
PTPN21-206ENST00000554628 ZNF777Q9ULD5 760 aaPredicted RBP28.31■■■□□ 2.12
PTPN21-206ENST00000554628 ABCC1P33527 1531 aa28.3■■■□□ 2.12
PTPN21-206ENST00000554628 POGZQ7Z3K3 1410 aa28.26■■■□□ 2.11
PTPN21-206ENST00000554628 ARHGEF12Q9NZN5 1544 aa28.25■■■□□ 2.11
PTPN21-206ENST00000554628 MYOM3Q5VTT5 1437 aa28.23■■■□□ 2.11
PTPN21-206ENST00000554628 SYCP2Q9BX26 1530 aa28.22■■■□□ 2.11
PTPN21-206ENST00000554628 ZNF644Q9H582 1327 aaPredicted RBP28.21■■■□□ 2.11
PTPN21-206ENST00000554628 ZNF518AQ6AHZ1 1483 aa28.2■■■□□ 2.1
PTPN21-206ENST00000554628 PLEKHH2Q8IVE3 1493 aa28.2■■■□□ 2.1
PTPN21-206ENST00000554628 TRAPPC8Q9Y2L5 1435 aa28.19■■■□□ 2.1
PTPN21-206ENST00000554628 ZMYM4Q5VZL5 1548 aa28.19■■■□□ 2.1
PTPN21-206ENST00000554628 PPARGC1BQ86YN6 1023 aaKnown RBP28.19■■■□□ 2.1
PTPN21-206ENST00000554628 KIAA1107Q9UPP5 1409 aa28.18■■■□□ 2.1
PTPN21-206ENST00000554628 AFAP1Q8N556 730 aa28.18■■■□□ 2.1
PTPN21-206ENST00000554628 CAMSAP2Q08AD1 1489 aa28.17■■■□□ 2.1
PTPN21-206ENST00000554628 HNRNPMP52272 730 aaKnown RBP eCLIP28.17■■■□□ 2.1
PTPN21-206ENST00000554628 KDM5CP41229 1560 aa28.17■■■□□ 2.1
PTPN21-206ENST00000554628 MIA2Q96PC5 1412 aa28.16■■■□□ 2.1
PTPN21-206ENST00000554628 MBD5Q9P267 1494 aa28.12■■■□□ 2.09
PTPN21-206ENST00000554628 MAGI2Q86UL8 1455 aa28.11■■■□□ 2.09
PTPN21-206ENST00000554628 ZFYVE16Q7Z3T8 1539 aa28.09■■■□□ 2.09
PTPN21-206ENST00000554628 ARHGEF40Q8TER5 1519 aa28.09■■■□□ 2.09
PTPN21-206ENST00000554628 HECW2Q9P2P5 1572 aa28.09■■■□□ 2.09
PTPN21-206ENST00000554628 FGD6Q6ZV73 1430 aa28.09■■■□□ 2.09
PTPN21-206ENST00000554628 PTPN23Q9H3S7 1636 aa28.09■■■□□ 2.09
PTPN21-206ENST00000554628 YEATS2Q9ULM3 1422 aa28.08■■■□□ 2.09
PTPN21-206ENST00000554628 MLH3Q9UHC1 1453 aa28.06■■■□□ 2.08
PTPN21-206ENST00000554628 KIDINS220Q9ULH0 1771 aa28.05■■■□□ 2.08
PTPN21-206ENST00000554628 MYT1LQ9UL68 1186 aa28.04■■■□□ 2.08
PTPN21-206ENST00000554628 ARHGEF5Q12774 1597 aa28.04■■■□□ 2.08
PTPN21-206ENST00000554628 CCDC141Q6ZP82 1450 aa28.03■■■□□ 2.08
PTPN21-206ENST00000554628 SPAG9O60271 1321 aaKnown RBP28.01■■■□□ 2.07
PTPN21-206ENST00000554628 TCOF1Q13428 1488 aaKnown RBP28.01■■■□□ 2.07
PTPN21-206ENST00000554628 RSPH4AQ5TD94 716 aa28■■■□□ 2.07
PTPN21-206ENST00000554628 ABCA6Q8N139 1617 aa28■■■□□ 2.07
PTPN21-206ENST00000554628 INO80Q9ULG1 1556 aaPredicted RBP28■■■□□ 2.07
PTPN21-206ENST00000554628 DIP2CQ9Y2E4 1556 aa27.98■■■□□ 2.07
PTPN21-206ENST00000554628 ATP7AQ04656 1500 aa27.98■■■□□ 2.07
PTPN21-206ENST00000554628 ATP10AO60312 1499 aa27.96■■■□□ 2.07
PTPN21-206ENST00000554628 SIGLEC1Q9BZZ2 1709 aa27.95■■■□□ 2.06
PTPN21-206ENST00000554628 C9orf84Q5VXU9 1444 aa27.93■■■□□ 2.06
PTPN21-206ENST00000554628 RTEL1-TNFRSF6BF6WH68 1400 aa27.91■■■□□ 2.06
PTPN21-206ENST00000554628 TSPY4P0CV99 314 aa27.91■■■□□ 2.06
PTPN21-206ENST00000554628 TSPY10P0CW01 314 aa27.91■■■□□ 2.06
PTPN21-206ENST00000554628 FAM50AQ14320 339 aaKnown RBP27.91■■■□□ 2.06
PTPN21-206ENST00000554628 DNMT1P26358 1616 aaKnown RBP27.91■■■□□ 2.06
PTPN21-206ENST00000554628 CROCC2H7BZ55 1655 aa27.9■■■□□ 2.06
PTPN21-206ENST00000554628 ABCC5O15440 1437 aa27.89■■■□□ 2.05
PTPN21-206ENST00000554628 REREQ9P2R6 1566 aa27.88■■■□□ 2.05
PTPN21-206ENST00000554628 DAPK1P53355 1430 aa27.88■■■□□ 2.05
PTPN21-206ENST00000554628 MAST1Q9Y2H9 1570 aa27.88■■■□□ 2.05
PTPN21-206ENST00000554628 ARID4BQ4LE39 1312 aaPredicted RBP27.87■■■□□ 2.05
PTPN21-206ENST00000554628 ADGBQ8N7X0 1667 aa27.86■■■□□ 2.05
PTPN21-206ENST00000554628 SHANK2Q9UPX8 1470 aa27.83■■■□□ 2.05
PTPN21-206ENST00000554628 BCORL1Q5H9F3 1711 aa27.83■■■□□ 2.05
PTPN21-206ENST00000554628 KDM4FA0A1W2PPD8 638 aa27.82■■■□□ 2.04
PTPN21-206ENST00000554628 RRBP1Q9P2E9 1410 aaKnown RBP27.81■■■□□ 2.04
PTPN21-206ENST00000554628 A2MP01023 1474 aa27.81■■■□□ 2.04
PTPN21-206ENST00000554628 PLXNC1O60486 1568 aa27.79■■■□□ 2.04
PTPN21-206ENST00000554628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.79■■■□□ 2.04
PTPN21-206ENST00000554628 AGLP35573 1532 aa27.78■■■□□ 2.04
PTPN21-206ENST00000554628 ADAMTSL3P82987 1691 aa27.77■■■□□ 2.04
PTPN21-206ENST00000554628 MLECQ14165 292 aa27.74■■■□□ 2.03
PTPN21-206ENST00000554628 CHIC2Q9UKJ5 165 aa27.74■■■□□ 2.03
PTPN21-206ENST00000554628 DHX29Q7Z478 1369 aaKnown RBP27.74■■■□□ 2.03
PTPN21-206ENST00000554628 PTPRKQ15262 1439 aa27.72■■■□□ 2.03
PTPN21-206ENST00000554628 MADDQ8WXG6 1647 aa27.7■■■□□ 2.02
PTPN21-206ENST00000554628 ITGAEP38570 1179 aa27.69■■■□□ 2.02
PTPN21-206ENST00000554628 RRP7BPQ9NSQ0 103 aa27.69■■■□□ 2.02
PTPN21-206ENST00000554628 ANKRD30AQ9BXX3 1397 aa27.68■■■□□ 2.02
PTPN21-206ENST00000554628 ADGRL2O95490 1459 aa27.68■■■□□ 2.02
PTPN21-206ENST00000554628 KIF15Q9NS87 1388 aa27.68■■■□□ 2.02
PTPN21-206ENST00000554628 NCOA1Q15788 1441 aa27.68■■■□□ 2.02
PTPN21-206ENST00000554628 FER1L4A9Z1Z3 1794 aa27.67■■■□□ 2.02
PTPN21-206ENST00000554628 DUOX2Q9NRD8 1548 aa27.66■■■□□ 2.02
PTPN21-206ENST00000554628 RIMS1Q86UR5 1692 aaKnown RBP27.64■■■□□ 2.01
PTPN21-206ENST00000554628 KIF3BO15066 747 aa27.62■■■□□ 2.01
PTPN21-206ENST00000554628 EIF2AK4Q9P2K8 1649 aaKnown RBP27.61■■■□□ 2.01
PTPN21-206ENST00000554628 GGT6Q6P531 493 aa27.6■■■□□ 2.01
PTPN21-206ENST00000554628 ERBINQ96RT1 1412 aa27.58■■■□□ 2.01
PTPN21-206ENST00000554628 ROCK1Q13464 1354 aa27.58■■■□□ 2.01
PTPN21-206ENST00000554628 PTPRMP28827 1452 aa27.56■■■□□ 2
PTPN21-206ENST00000554628 AEBP2Q6ZN18 517 aaPredicted RBP27.56■■■□□ 2
PTPN21-206ENST00000554628 RNF17Q9BXT8 1623 aaKnown RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms