RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-208ENST00000554627 PHLDB1Q86UU1 1377 aa14.8□□□□□ -0.04
MARK3-208ENST00000554627 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
MARK3-208ENST00000554627 TSPOAP1O95153 1857 aa14.8□□□□□ -0.04
MARK3-208ENST00000554627 GPATCH8Q9UKJ3 1502 aaKnown RBP14.8□□□□□ -0.04
MARK3-208ENST00000554627 FGD6Q6ZV73 1430 aa14.78□□□□□ -0.04
MARK3-208ENST00000554627 ARHGAP5Q13017 1502 aa14.78□□□□□ -0.04
MARK3-208ENST00000554627 RRBP1Q9P2E9 1410 aaKnown RBP14.78□□□□□ -0.04
MARK3-208ENST00000554627 PLCH2O75038 1416 aa14.75□□□□□ -0.05
MARK3-208ENST00000554627 TCOF1Q13428 1488 aaKnown RBP14.74□□□□□ -0.05
MARK3-208ENST00000554627 CD109Q6YHK3 1445 aa14.74□□□□□ -0.05
MARK3-208ENST00000554627 CROCC2H7BZ55 1655 aa14.73□□□□□ -0.05
MARK3-208ENST00000554627 PPRC1Q5VV67 1664 aaKnown RBP14.73□□□□□ -0.05
MARK3-208ENST00000554627 SAMD9LQ8IVG5 1584 aa14.73□□□□□ -0.05
MARK3-208ENST00000554627 CAMSAP2Q08AD1 1489 aa14.73□□□□□ -0.05
MARK3-208ENST00000554627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.73□□□□□ -0.05
MARK3-208ENST00000554627 CFDP1Q9UEE9 299 aaPredicted RBP14.73□□□□□ -0.05
MARK3-208ENST00000554627 PLEKHH2Q8IVE3 1493 aa14.72□□□□□ -0.05
MARK3-208ENST00000554627 FANCAO15360 1455 aa14.72□□□□□ -0.05
MARK3-208ENST00000554627 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
MARK3-208ENST00000554627 DNMT1P26358 1616 aaKnown RBP14.71□□□□□ -0.05
MARK3-208ENST00000554627 FAM69CQ0P6D2 419 aa14.71□□□□□ -0.05
MARK3-208ENST00000554627 TRIM26Q12899 539 aaPredicted RBP14.7□□□□□ -0.06
MARK3-208ENST00000554627 ABCC1P33527 1531 aa14.7□□□□□ -0.06
MARK3-208ENST00000554627 NEO1Q92859 1461 aa14.69□□□□□ -0.06
MARK3-208ENST00000554627 ARHGEF5Q12774 1597 aa14.69□□□□□ -0.06
MARK3-208ENST00000554627 ADGBQ8N7X0 1667 aa14.69□□□□□ -0.06
MARK3-208ENST00000554627 EFCAB2Q5VUJ9 269 aa14.68□□□□□ -0.06
MARK3-208ENST00000554627 SYCP2Q9BX26 1530 aa14.67□□□□□ -0.06
MARK3-208ENST00000554627 KIAA1107Q9UPP5 1409 aa14.65□□□□□ -0.06
MARK3-208ENST00000554627 FAM50AQ14320 339 aaKnown RBP14.65□□□□□ -0.06
MARK3-208ENST00000554627 ADGRL1O94910 1474 aa14.65□□□□□ -0.06
MARK3-208ENST00000554627 ZNF777Q9ULD5 760 aaPredicted RBP14.64□□□□□ -0.07
MARK3-208ENST00000554627 CCDC141Q6ZP82 1450 aa14.63□□□□□ -0.07
MARK3-208ENST00000554627 AKNAQ7Z591 1439 aa14.63□□□□□ -0.07
MARK3-208ENST00000554627 RICTORQ6R327 1708 aa14.63□□□□□ -0.07
MARK3-208ENST00000554627 SHANK2Q9UPX8 1470 aa14.62□□□□□ -0.07
MARK3-208ENST00000554627 MAST1Q9Y2H9 1570 aa14.61□□□□□ -0.07
MARK3-208ENST00000554627 DAPK1P53355 1430 aa14.61□□□□□ -0.07
MARK3-208ENST00000554627 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
MARK3-208ENST00000554627 RSPH4AQ5TD94 716 aa14.6□□□□□ -0.07
MARK3-208ENST00000554627 MBD5Q9P267 1494 aa14.6□□□□□ -0.07
MARK3-208ENST00000554627 GCC2Q8IWJ2 1684 aa14.59□□□□□ -0.07
MARK3-208ENST00000554627 ZNF644Q9H582 1327 aaPredicted RBP14.59□□□□□ -0.07
MARK3-208ENST00000554627 ZNF518AQ6AHZ1 1483 aa14.59□□□□□ -0.07
MARK3-208ENST00000554627 ARHGEF12Q9NZN5 1544 aa14.58□□□□□ -0.08
MARK3-208ENST00000554627 PLXNC1O60486 1568 aa14.57□□□□□ -0.08
MARK3-208ENST00000554627 KDM5CP41229 1560 aa14.57□□□□□ -0.08
MARK3-208ENST00000554627 SCAPERQ9BY12 1400 aa14.57□□□□□ -0.08
MARK3-208ENST00000554627 DENND4BO75064 1496 aaPredicted RBP14.57□□□□□ -0.08
MARK3-208ENST00000554627 HECW2Q9P2P5 1572 aa14.57□□□□□ -0.08
MARK3-208ENST00000554627 INO80Q9ULG1 1556 aaPredicted RBP14.57□□□□□ -0.08
MARK3-208ENST00000554627 ABCC5O15440 1437 aa14.57□□□□□ -0.08
MARK3-208ENST00000554627 POGZQ7Z3K3 1410 aa14.57□□□□□ -0.08
MARK3-208ENST00000554627 ZMYM4Q5VZL5 1548 aa14.54□□□□□ -0.08
MARK3-208ENST00000554627 ZFYVE16Q7Z3T8 1539 aa14.54□□□□□ -0.08
MARK3-208ENST00000554627 C9orf84Q5VXU9 1444 aa14.54□□□□□ -0.08
MARK3-208ENST00000554627 FRMPD1Q5SYB0 1578 aa14.54□□□□□ -0.08
MARK3-208ENST00000554627 ADGRL2O95490 1459 aa14.54□□□□□ -0.08
MARK3-208ENST00000554627 HNRNPMP52272 730 aaKnown RBP eCLIP14.54□□□□□ -0.082e-7■■■■■ 29.2
MARK3-208ENST00000554627 KDM6BO15054 1643 aa14.54□□□□□ -0.08
MARK3-208ENST00000554627 ATP7AQ04656 1500 aa14.54□□□□□ -0.08
MARK3-208ENST00000554627 KIDINS220Q9ULH0 1771 aa14.54□□□□□ -0.08
MARK3-208ENST00000554627 TSPY4P0CV99 314 aa14.53□□□□□ -0.08
MARK3-208ENST00000554627 TSPY10P0CW01 314 aa14.53□□□□□ -0.08
MARK3-208ENST00000554627 ITGAEP38570 1179 aa14.53□□□□□ -0.08
MARK3-208ENST00000554627 TRAPPC8Q9Y2L5 1435 aa14.53□□□□□ -0.08
MARK3-208ENST00000554627 ROCK1Q13464 1354 aa14.53□□□□□ -0.08
MARK3-208ENST00000554627 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.08
MARK3-208ENST00000554627 RTEL1-TNFRSF6BF6WH68 1400 aa14.52□□□□□ -0.09
MARK3-208ENST00000554627 ANKRD30AQ9BXX3 1397 aa14.5□□□□□ -0.09
MARK3-208ENST00000554627 PTPRKQ15262 1439 aa14.5□□□□□ -0.09
MARK3-208ENST00000554627 MLH3Q9UHC1 1453 aa14.49□□□□□ -0.09
MARK3-208ENST00000554627 HFM1A2PYH4 1435 aa14.49□□□□□ -0.09
MARK3-208ENST00000554627 MAGI2Q86UL8 1455 aa14.49□□□□□ -0.09
MARK3-208ENST00000554627 SPAG9O60271 1321 aaKnown RBP14.48□□□□□ -0.09
MARK3-208ENST00000554627 ABCA6Q8N139 1617 aa14.48□□□□□ -0.09
MARK3-208ENST00000554627 NCOA1Q15788 1441 aa14.47□□□□□ -0.09
MARK3-208ENST00000554627 DUOX2Q9NRD8 1548 aa14.47□□□□□ -0.09
MARK3-208ENST00000554627 EIF2AK4Q9P2K8 1649 aaKnown RBP14.47□□□□□ -0.09
MARK3-208ENST00000554627 AFAP1Q8N556 730 aa14.46□□□□□ -0.09
MARK3-208ENST00000554627 ARHGEF40Q8TER5 1519 aa14.46□□□□□ -0.1
MARK3-208ENST00000554627 CHIC2Q9UKJ5 165 aa14.45□□□□□ -0.1
MARK3-208ENST00000554627 DIP2CQ9Y2E4 1556 aa14.45□□□□□ -0.1
MARK3-208ENST00000554627 NAIPQ13075 1403 aa14.44□□□□□ -0.1
MARK3-208ENST00000554627 SETD5Q9C0A6 1442 aa14.44□□□□□ -0.1
MARK3-208ENST00000554627 KIF15Q9NS87 1388 aa14.44□□□□□ -0.1
MARK3-208ENST00000554627 BCORL1Q5H9F3 1711 aa14.43□□□□□ -0.1
MARK3-208ENST00000554627 RAPGEF3O95398 923 aa14.43□□□□□ -0.1
MARK3-208ENST00000554627 MYT1LQ9UL68 1186 aa14.43□□□□□ -0.1
MARK3-208ENST00000554627 REREQ9P2R6 1566 aa14.42□□□□□ -0.1
MARK3-208ENST00000554627 ERBINQ96RT1 1412 aa14.42□□□□□ -0.1
MARK3-208ENST00000554627 ACIN1Q9UKV3 1341 aaKnown RBP14.42□□□□□ -0.1
MARK3-208ENST00000554627 COL17A1Q9UMD9 1497 aaPredicted RBP14.42□□□□□ -0.1
MARK3-208ENST00000554627 RRP7BPQ9NSQ0 103 aa14.4□□□□□ -0.1
MARK3-208ENST00000554627 ANKRD50Q9ULJ7 1429 aa14.4□□□□□ -0.1
MARK3-208ENST00000554627 DEPDC5O75140 1603 aa14.39□□□□□ -0.11
MARK3-208ENST00000554627 UNC13BO14795 1591 aa14.39□□□□□ -0.11
MARK3-208ENST00000554627 A2MP01023 1474 aa14.39□□□□□ -0.11
MARK3-208ENST00000554627 RAB3GAP2Q9H2M9 1393 aa14.37□□□□□ -0.11
MARK3-208ENST00000554627 RNF17Q9BXT8 1623 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms