RNA–Protein interactions for RNA: ENST00000554402.6

ACTR10-204, Transcript of actin related protein 10 homolog, humanhuman

TSL 1 (best)

Gene ACTR10, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR10-204ENST00000554402 COL17A1Q9UMD9 1497 aaPredicted RBP30.3■■■□□ 2.44
ACTR10-204ENST00000554402 KDM6BO15054 1643 aa30.29■■■□□ 2.44
ACTR10-204ENST00000554402 CFAP74Q9C0B2 1584 aa30.29■■■□□ 2.44
ACTR10-204ENST00000554402 CCNB3Q8WWL7 1395 aa30.28■■■□□ 2.44
ACTR10-204ENST00000554402 ARHGAP5Q13017 1502 aa30.28■■■□□ 2.44
ACTR10-204ENST00000554402 EFCAB2Q5VUJ9 269 aa30.27■■■□□ 2.44
ACTR10-204ENST00000554402 AKNAQ7Z591 1439 aa30.26■■■□□ 2.43
ACTR10-204ENST00000554402 ITSN2Q9NZM3 1697 aa30.21■■■□□ 2.43
ACTR10-204ENST00000554402 CFDP1Q9UEE9 299 aaPredicted RBP30.18■■■□□ 2.42
ACTR10-204ENST00000554402 ADGRL1O94910 1474 aa30.17■■■□□ 2.42
ACTR10-204ENST00000554402 SCAPERQ9BY12 1400 aa30.14■■■□□ 2.42
ACTR10-204ENST00000554402 SAMD9LQ8IVG5 1584 aa30.14■■■□□ 2.42
ACTR10-204ENST00000554402 DENND4BO75064 1496 aaPredicted RBP30.12■■■□□ 2.41
ACTR10-204ENST00000554402 ABCC1P33527 1531 aa30.12■■■□□ 2.41
ACTR10-204ENST00000554402 MYOM3Q5VTT5 1437 aa30.12■■■□□ 2.41
ACTR10-204ENST00000554402 RAPGEF3O95398 923 aa30.11■■■□□ 2.41
ACTR10-204ENST00000554402 ZNF777Q9ULD5 760 aaPredicted RBP30.11■■■□□ 2.41
ACTR10-204ENST00000554402 FRMPD1Q5SYB0 1578 aa30.1■■■□□ 2.41
ACTR10-204ENST00000554402 RICTORQ6R327 1708 aa30.09■■■□□ 2.41
ACTR10-204ENST00000554402 ARHGEF12Q9NZN5 1544 aa30.08■■■□□ 2.41
ACTR10-204ENST00000554402 PPARGC1BQ86YN6 1023 aaKnown RBP30.07■■■□□ 2.4
ACTR10-204ENST00000554402 ZNF644Q9H582 1327 aaPredicted RBP30.06■■■□□ 2.4
ACTR10-204ENST00000554402 POGZQ7Z3K3 1410 aa30.06■■■□□ 2.4
ACTR10-204ENST00000554402 MIA2Q96PC5 1412 aa30.06■■■□□ 2.4
ACTR10-204ENST00000554402 PLEKHH2Q8IVE3 1493 aa30.05■■■□□ 2.4
ACTR10-204ENST00000554402 KIAA1107Q9UPP5 1409 aa30.05■■■□□ 2.4
ACTR10-204ENST00000554402 SYCP2Q9BX26 1530 aa30.03■■■□□ 2.4
ACTR10-204ENST00000554402 CAMSAP2Q08AD1 1489 aa30.01■■■□□ 2.4
ACTR10-204ENST00000554402 ZNF518AQ6AHZ1 1483 aa30.01■■■□□ 2.39
ACTR10-204ENST00000554402 TRAPPC8Q9Y2L5 1435 aa30■■■□□ 2.39
ACTR10-204ENST00000554402 HNRNPMP52272 730 aaKnown RBP eCLIP29.99■■■□□ 2.39
ACTR10-204ENST00000554402 ZMYM4Q5VZL5 1548 aa29.99■■■□□ 2.39
ACTR10-204ENST00000554402 FGD6Q6ZV73 1430 aa29.98■■■□□ 2.39
ACTR10-204ENST00000554402 AFAP1Q8N556 730 aa29.98■■■□□ 2.39
ACTR10-204ENST00000554402 MBD5Q9P267 1494 aa29.98■■■□□ 2.39
ACTR10-204ENST00000554402 KDM5CP41229 1560 aa29.97■■■□□ 2.39
ACTR10-204ENST00000554402 PTPN23Q9H3S7 1636 aa29.93■■■□□ 2.38
ACTR10-204ENST00000554402 TCOF1Q13428 1488 aaKnown RBP29.91■■■□□ 2.38
ACTR10-204ENST00000554402 MAGI2Q86UL8 1455 aa29.91■■■□□ 2.38
ACTR10-204ENST00000554402 MLH3Q9UHC1 1453 aa29.88■■■□□ 2.37
ACTR10-204ENST00000554402 ARHGEF5Q12774 1597 aa29.87■■■□□ 2.37
ACTR10-204ENST00000554402 RSPH4AQ5TD94 716 aa29.86■■■□□ 2.37
ACTR10-204ENST00000554402 HECW2Q9P2P5 1572 aa29.86■■■□□ 2.37
ACTR10-204ENST00000554402 YEATS2Q9ULM3 1422 aa29.86■■■□□ 2.37
ACTR10-204ENST00000554402 CCDC141Q6ZP82 1450 aa29.85■■■□□ 2.37
ACTR10-204ENST00000554402 ZFYVE16Q7Z3T8 1539 aa29.84■■■□□ 2.37
ACTR10-204ENST00000554402 ARHGEF40Q8TER5 1519 aa29.84■■■□□ 2.37
ACTR10-204ENST00000554402 SPAG9O60271 1321 aaKnown RBP29.82■■■□□ 2.36
ACTR10-204ENST00000554402 KIDINS220Q9ULH0 1771 aa29.81■■■□□ 2.36
ACTR10-204ENST00000554402 INO80Q9ULG1 1556 aaPredicted RBP29.79■■■□□ 2.36
ACTR10-204ENST00000554402 ATP7AQ04656 1500 aa29.77■■■□□ 2.36
ACTR10-204ENST00000554402 MYT1LQ9UL68 1186 aa29.76■■■□□ 2.36
ACTR10-204ENST00000554402 RTEL1-TNFRSF6BF6WH68 1400 aa29.76■■■□□ 2.35
ACTR10-204ENST00000554402 ABCC5O15440 1437 aa29.76■■■□□ 2.35
ACTR10-204ENST00000554402 ABCA6Q8N139 1617 aa29.76■■■□□ 2.35
ACTR10-204ENST00000554402 FAM50AQ14320 339 aaKnown RBP29.76■■■□□ 2.35
ACTR10-204ENST00000554402 DIP2CQ9Y2E4 1556 aa29.75■■■□□ 2.35
ACTR10-204ENST00000554402 RRBP1Q9P2E9 1410 aaKnown RBP29.75■■■□□ 2.35
ACTR10-204ENST00000554402 DNMT1P26358 1616 aaKnown RBP29.75■■■□□ 2.35
ACTR10-204ENST00000554402 ATP10AO60312 1499 aa29.74■■■□□ 2.35
ACTR10-204ENST00000554402 TSPY4P0CV99 314 aa29.73■■■□□ 2.35
ACTR10-204ENST00000554402 TSPY10P0CW01 314 aa29.73■■■□□ 2.35
ACTR10-204ENST00000554402 DAPK1P53355 1430 aa29.73■■■□□ 2.35
ACTR10-204ENST00000554402 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.72■■■□□ 2.35
ACTR10-204ENST00000554402 MAST1Q9Y2H9 1570 aa29.71■■■□□ 2.35
ACTR10-204ENST00000554402 CROCC2H7BZ55 1655 aa29.7■■■□□ 2.35
ACTR10-204ENST00000554402 C9orf84Q5VXU9 1444 aa29.69■■■□□ 2.34
ACTR10-204ENST00000554402 SHANK2Q9UPX8 1470 aa29.68■■■□□ 2.34
ACTR10-204ENST00000554402 REREQ9P2R6 1566 aa29.67■■■□□ 2.34
ACTR10-204ENST00000554402 SIGLEC1Q9BZZ2 1709 aa29.67■■■□□ 2.34
ACTR10-204ENST00000554402 ADGBQ8N7X0 1667 aa29.61■■■□□ 2.33
ACTR10-204ENST00000554402 A2MP01023 1474 aa29.59■■■□□ 2.33
ACTR10-204ENST00000554402 PTPRKQ15262 1439 aa29.59■■■□□ 2.33
ACTR10-204ENST00000554402 PLXNC1O60486 1568 aa29.59■■■□□ 2.33
ACTR10-204ENST00000554402 AGLP35573 1532 aa29.57■■■□□ 2.32
ACTR10-204ENST00000554402 ARID4BQ4LE39 1312 aaPredicted RBP29.57■■■□□ 2.32
ACTR10-204ENST00000554402 CHIC2Q9UKJ5 165 aa29.55■■■□□ 2.32
ACTR10-204ENST00000554402 DHX29Q7Z478 1369 aaKnown RBP29.55■■■□□ 2.32
ACTR10-204ENST00000554402 ADGRL2O95490 1459 aa29.54■■■□□ 2.32
ACTR10-204ENST00000554402 NCOA1Q15788 1441 aa29.53■■■□□ 2.32
ACTR10-204ENST00000554402 BCORL1Q5H9F3 1711 aa29.52■■■□□ 2.32
ACTR10-204ENST00000554402 ANKRD30AQ9BXX3 1397 aa29.51■■■□□ 2.32
ACTR10-204ENST00000554402 ITGAEP38570 1179 aa29.5■■■□□ 2.31
ACTR10-204ENST00000554402 KIF15Q9NS87 1388 aa29.5■■■□□ 2.31
ACTR10-204ENST00000554402 KDM4FA0A1W2PPD8 638 aa29.49■■■□□ 2.31
ACTR10-204ENST00000554402 RRP7BPQ9NSQ0 103 aa29.49■■■□□ 2.31
ACTR10-204ENST00000554402 DUOX2Q9NRD8 1548 aa29.48■■■□□ 2.31
ACTR10-204ENST00000554402 ROCK1Q13464 1354 aa29.46■■■□□ 2.31
ACTR10-204ENST00000554402 ADAMTSL3P82987 1691 aa29.46■■■□□ 2.31
ACTR10-204ENST00000554402 MLECQ14165 292 aa29.44■■■□□ 2.3
ACTR10-204ENST00000554402 ERBINQ96RT1 1412 aa29.41■■■□□ 2.3
ACTR10-204ENST00000554402 EIF2AK4Q9P2K8 1649 aaKnown RBP29.39■■■□□ 2.3
ACTR10-204ENST00000554402 KIF3BO15066 747 aa29.39■■■□□ 2.3
ACTR10-204ENST00000554402 MADDQ8WXG6 1647 aa29.38■■■□□ 2.29
ACTR10-204ENST00000554402 GGT6Q6P531 493 aa29.34■■■□□ 2.29
ACTR10-204ENST00000554402 ANKRD50Q9ULJ7 1429 aa29.33■■■□□ 2.29
ACTR10-204ENST00000554402 RNF17Q9BXT8 1623 aaKnown RBP29.32■■■□□ 2.28
ACTR10-204ENST00000554402 FER1L4A9Z1Z3 1794 aa29.32■■■□□ 2.28
ACTR10-204ENST00000554402 PPP6R1Q9UPN7 881 aa29.3■■■□□ 2.28
ACTR10-204ENST00000554402 RIMS1Q86UR5 1692 aaKnown RBP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms