RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
PTCD2P1-201ENST00000554393 CCDC18Q5T9S5 1454 aa16.93■□□□□ 0.3
PTCD2P1-201ENST00000554393 CDK11AQ9UQ88 783 aaPredicted RBP16.92■□□□□ 0.3
PTCD2P1-201ENST00000554393 CLIP1P30622 1438 aa16.92■□□□□ 0.3
PTCD2P1-201ENST00000554393 MYO5CQ9NQX4 1742 aa16.92■□□□□ 0.3
PTCD2P1-201ENST00000554393 FYCO1Q9BQS8 1478 aa16.92■□□□□ 0.3
PTCD2P1-201ENST00000554393 KIF14Q15058 1648 aa16.92■□□□□ 0.3
PTCD2P1-201ENST00000554393 FRMPD1Q5SYB0 1578 aa16.91■□□□□ 0.3
PTCD2P1-201ENST00000554393 FANCAO15360 1455 aa16.91■□□□□ 0.3
PTCD2P1-201ENST00000554393 TROQ12816 1431 aaPredicted RBP16.9■□□□□ 0.3
PTCD2P1-201ENST00000554393 RICTORQ6R327 1708 aa16.9■□□□□ 0.3
PTCD2P1-201ENST00000554393 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
PTCD2P1-201ENST00000554393 PLCH2O75038 1416 aa16.87■□□□□ 0.29
PTCD2P1-201ENST00000554393 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
PTCD2P1-201ENST00000554393 DMRT2Q9Y5R5 561 aa16.85■□□□□ 0.29
PTCD2P1-201ENST00000554393 DISP3Q9P2K9 1392 aa16.85■□□□□ 0.29
PTCD2P1-201ENST00000554393 DENND4BO75064 1496 aaPredicted RBP16.85■□□□□ 0.29
PTCD2P1-201ENST00000554393 ZMYM4Q5VZL5 1548 aa16.84■□□□□ 0.29
PTCD2P1-201ENST00000554393 ARHGEF40Q8TER5 1519 aa16.82■□□□□ 0.28
PTCD2P1-201ENST00000554393 RAPGEF3O95398 923 aa16.82■□□□□ 0.28
PTCD2P1-201ENST00000554393 PREX2Q70Z35 1606 aa16.81■□□□□ 0.28
PTCD2P1-201ENST00000554393 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
PTCD2P1-201ENST00000554393 CDC42BPBQ9Y5S2 1711 aa16.79■□□□□ 0.28
PTCD2P1-201ENST00000554393 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
PTCD2P1-201ENST00000554393 POGZQ7Z3K3 1410 aa16.78■□□□□ 0.28
PTCD2P1-201ENST00000554393 ARHGAP5Q13017 1502 aa16.77■□□□□ 0.28
PTCD2P1-201ENST00000554393 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.28
PTCD2P1-201ENST00000554393 CDC42BPAQ5VT25 1732 aa16.76■□□□□ 0.27
PTCD2P1-201ENST00000554393 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
PTCD2P1-201ENST00000554393 ZFYVE16Q7Z3T8 1539 aa16.75■□□□□ 0.27
PTCD2P1-201ENST00000554393 ADAMTSL3P82987 1691 aa16.75■□□□□ 0.27
PTCD2P1-201ENST00000554393 BCORL1Q5H9F3 1711 aa16.74■□□□□ 0.27
PTCD2P1-201ENST00000554393 ZNF518AQ6AHZ1 1483 aa16.73■□□□□ 0.27
PTCD2P1-201ENST00000554393 KDM5CP41229 1560 aa16.72■□□□□ 0.27
PTCD2P1-201ENST00000554393 ABCC1P33527 1531 aa16.71■□□□□ 0.27
PTCD2P1-201ENST00000554393 ITSN2Q9NZM3 1697 aa16.7■□□□□ 0.26
PTCD2P1-201ENST00000554393 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
PTCD2P1-201ENST00000554393 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
PTCD2P1-201ENST00000554393 YEATS2Q9ULM3 1422 aa16.69■□□□□ 0.26
PTCD2P1-201ENST00000554393 SIGLEC1Q9BZZ2 1709 aa16.67■□□□□ 0.26
PTCD2P1-201ENST00000554393 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
PTCD2P1-201ENST00000554393 GPATCH8Q9UKJ3 1502 aaKnown RBP16.66■□□□□ 0.26
PTCD2P1-201ENST00000554393 MADDQ8WXG6 1647 aa16.66■□□□□ 0.26
PTCD2P1-201ENST00000554393 ATP10AO60312 1499 aa16.65■□□□□ 0.26
PTCD2P1-201ENST00000554393 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
PTCD2P1-201ENST00000554393 MLH3Q9UHC1 1453 aa16.64■□□□□ 0.25
PTCD2P1-201ENST00000554393 REREQ9P2R6 1566 aa16.64■□□□□ 0.25
PTCD2P1-201ENST00000554393 C9orf84Q5VXU9 1444 aa16.63■□□□□ 0.25
PTCD2P1-201ENST00000554393 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
PTCD2P1-201ENST00000554393 PTPRMP28827 1452 aa16.63■□□□□ 0.25
PTCD2P1-201ENST00000554393 ARHGEF12Q9NZN5 1544 aa16.63■□□□□ 0.25
PTCD2P1-201ENST00000554393 ARID4BQ4LE39 1312 aaPredicted RBP16.63■□□□□ 0.25
PTCD2P1-201ENST00000554393 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
PTCD2P1-201ENST00000554393 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
PTCD2P1-201ENST00000554393 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
PTCD2P1-201ENST00000554393 DIP2CQ9Y2E4 1556 aa16.62■□□□□ 0.25
PTCD2P1-201ENST00000554393 PLEKHH2Q8IVE3 1493 aa16.61■□□□□ 0.25
PTCD2P1-201ENST00000554393 RIMS1Q86UR5 1692 aaKnown RBP16.61■□□□□ 0.25
PTCD2P1-201ENST00000554393 SUPT6HQ7KZ85 1726 aaKnown RBP16.61■□□□□ 0.25
PTCD2P1-201ENST00000554393 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
PTCD2P1-201ENST00000554393 ABCA6Q8N139 1617 aa16.6■□□□□ 0.25
PTCD2P1-201ENST00000554393 FER1L4A9Z1Z3 1794 aa16.6■□□□□ 0.25
PTCD2P1-201ENST00000554393 AFAP1Q8N556 730 aa16.6■□□□□ 0.25
PTCD2P1-201ENST00000554393 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
PTCD2P1-201ENST00000554393 TRAPPC8Q9Y2L5 1435 aa16.6■□□□□ 0.25
PTCD2P1-201ENST00000554393 SYCP2Q9BX26 1530 aa16.6■□□□□ 0.25
PTCD2P1-201ENST00000554393 KIDINS220Q9ULH0 1771 aa16.59■□□□□ 0.25
PTCD2P1-201ENST00000554393 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
PTCD2P1-201ENST00000554393 MAP3K1Q13233 1512 aa16.58■□□□□ 0.24
PTCD2P1-201ENST00000554393 CFDP1Q9UEE9 299 aaPredicted RBP16.56■□□□□ 0.24
PTCD2P1-201ENST00000554393 CERKQ8TCT0 537 aa16.55■□□□□ 0.24
PTCD2P1-201ENST00000554393 AGLP35573 1532 aa16.55■□□□□ 0.24
PTCD2P1-201ENST00000554393 INO80Q9ULG1 1556 aaPredicted RBP16.54■□□□□ 0.24
PTCD2P1-201ENST00000554393 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
PTCD2P1-201ENST00000554393 HOXD11P31277 338 aaPredicted RBP16.53■□□□□ 0.24
PTCD2P1-201ENST00000554393 ZNF777Q9ULD5 760 aaPredicted RBP16.53■□□□□ 0.24
PTCD2P1-201ENST00000554393 LRRC9Q6ZRR7 1453 aa16.53■□□□□ 0.24
PTCD2P1-201ENST00000554393 ATP7AQ04656 1500 aa16.52■□□□□ 0.24
PTCD2P1-201ENST00000554393 MYT1LQ9UL68 1186 aa16.51■□□□□ 0.23
PTCD2P1-201ENST00000554393 MBD5Q9P267 1494 aa16.48■□□□□ 0.23
PTCD2P1-201ENST00000554393 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
PTCD2P1-201ENST00000554393 HNRNPMP52272 730 aaKnown RBP eCLIP16.48■□□□□ 0.23
PTCD2P1-201ENST00000554393 ADGBQ8N7X0 1667 aa16.48■□□□□ 0.23
PTCD2P1-201ENST00000554393 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
PTCD2P1-201ENST00000554393 MLECQ14165 292 aa16.47■□□□□ 0.23
PTCD2P1-201ENST00000554393 CAMSAP2Q08AD1 1489 aa16.47■□□□□ 0.23
PTCD2P1-201ENST00000554393 RTEL1-TNFRSF6BF6WH68 1400 aa16.45■□□□□ 0.22
PTCD2P1-201ENST00000554393 ARHGEF5Q12774 1597 aa16.44■□□□□ 0.22
PTCD2P1-201ENST00000554393 ZNF644Q9H582 1327 aaPredicted RBP16.44■□□□□ 0.22
PTCD2P1-201ENST00000554393 CCDC141Q6ZP82 1450 aa16.43■□□□□ 0.22
PTCD2P1-201ENST00000554393 MROH2AA6NES4 1674 aa16.43■□□□□ 0.22
PTCD2P1-201ENST00000554393 PREX1Q8TCU6 1659 aa16.43■□□□□ 0.22
PTCD2P1-201ENST00000554393 A2MP01023 1474 aa16.42■□□□□ 0.22
PTCD2P1-201ENST00000554393 C3P01024 1663 aa16.42■□□□□ 0.22
PTCD2P1-201ENST00000554393 SETD1BQ9UPS6 1966 aaKnown RBP16.42■□□□□ 0.22
PTCD2P1-201ENST00000554393 RSPH4AQ5TD94 716 aa16.41■□□□□ 0.22
PTCD2P1-201ENST00000554393 CNTLNQ9NXG0 1405 aa16.41■□□□□ 0.22
PTCD2P1-201ENST00000554393 MIA2Q96PC5 1412 aa16.4■□□□□ 0.22
PTCD2P1-201ENST00000554393 MYOM3Q5VTT5 1437 aa16.39■□□□□ 0.21
PTCD2P1-201ENST00000554393 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms