RNA–Protein interactions for RNA: ENST00000554327.5

ITGA7-208, Transcript of integrin subunit alpha 7, humanhuman

TSL 2

Gene ITGA7, Length 1,965 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-208ENST00000554327 NPM1P06748 294 aaKnown RBP eCLIP24.55■■□□□ 1.52
ITGA7-208ENST00000554327 ZNF644Q9H582 1327 aaPredicted RBP24.53■■□□□ 1.52
ITGA7-208ENST00000554327 CFDP1Q9UEE9 299 aaPredicted RBP24.53■■□□□ 1.52
ITGA7-208ENST00000554327 CAMSAP2Q08AD1 1489 aa24.51■■□□□ 1.51
ITGA7-208ENST00000554327 PTPRKQ15262 1439 aa24.49■■□□□ 1.51
ITGA7-208ENST00000554327 ABCA9Q8IUA7 1624 aa24.48■■□□□ 1.51
ITGA7-208ENST00000554327 ZNF777Q9ULD5 760 aaPredicted RBP24.47■■□□□ 1.51
ITGA7-208ENST00000554327 DNMT1P26358 1616 aaKnown RBP24.46■■□□□ 1.51
ITGA7-208ENST00000554327 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
ITGA7-208ENST00000554327 MAPKBP1O60336 1514 aa24.45■■□□□ 1.5
ITGA7-208ENST00000554327 ARHGAP5Q13017 1502 aa24.45■■□□□ 1.5
ITGA7-208ENST00000554327 CROCC2H7BZ55 1655 aa24.41■■□□□ 1.5
ITGA7-208ENST00000554327 PLCH2O75038 1416 aa24.4■■□□□ 1.5
ITGA7-208ENST00000554327 DAPK1P53355 1430 aa24.4■■□□□ 1.5
ITGA7-208ENST00000554327 ABCC5O15440 1437 aa24.38■■□□□ 1.49
ITGA7-208ENST00000554327 DHX57Q6P158 1386 aaKnown RBP24.35■■□□□ 1.49
ITGA7-208ENST00000554327 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
ITGA7-208ENST00000554327 ARAP3Q8WWN8 1544 aa24.34■■□□□ 1.49
ITGA7-208ENST00000554327 SYCP2Q9BX26 1530 aa24.34■■□□□ 1.49
ITGA7-208ENST00000554327 SETD5Q9C0A6 1442 aa24.32■■□□□ 1.48
ITGA7-208ENST00000554327 MBD5Q9P267 1494 aa24.31■■□□□ 1.48
ITGA7-208ENST00000554327 ARHGEF5Q12774 1597 aa24.31■■□□□ 1.48
ITGA7-208ENST00000554327 RAB3GAP2Q9H2M9 1393 aa24.31■■□□□ 1.48
ITGA7-208ENST00000554327 ADGBQ8N7X0 1667 aa24.31■■□□□ 1.48
ITGA7-208ENST00000554327 HNRNPMP52272 730 aaKnown RBP eCLIP24.31■■□□□ 1.48
ITGA7-208ENST00000554327 GCC2Q8IWJ2 1684 aa24.3■■□□□ 1.48
ITGA7-208ENST00000554327 CLSPNQ9HAW4 1339 aa24.3■■□□□ 1.48
ITGA7-208ENST00000554327 HFM1A2PYH4 1435 aa24.29■■□□□ 1.48
ITGA7-208ENST00000554327 ABCC1P33527 1531 aa24.29■■□□□ 1.48
ITGA7-208ENST00000554327 ARHGEF12Q9NZN5 1544 aa24.28■■□□□ 1.48
ITGA7-208ENST00000554327 DIP2BQ9P265 1576 aa24.28■■□□□ 1.48
ITGA7-208ENST00000554327 FANCAO15360 1455 aa24.28■■□□□ 1.48
ITGA7-208ENST00000554327 EFCAB2Q5VUJ9 269 aa24.27■■□□□ 1.48
ITGA7-208ENST00000554327 MAP3K4Q9Y6R4 1608 aa24.27■■□□□ 1.48
ITGA7-208ENST00000554327 NAIPQ13075 1403 aa24.27■■□□□ 1.48
ITGA7-208ENST00000554327 AKNAQ7Z591 1439 aa24.27■■□□□ 1.48
ITGA7-208ENST00000554327 RRP7BPQ9NSQ0 103 aa24.26■■□□□ 1.47
ITGA7-208ENST00000554327 CD109Q6YHK3 1445 aa24.26■■□□□ 1.47
ITGA7-208ENST00000554327 GLI2P10070 1586 aa24.24■■□□□ 1.47
ITGA7-208ENST00000554327 CCDC141Q6ZP82 1450 aa24.24■■□□□ 1.47
ITGA7-208ENST00000554327 PLEKHH2Q8IVE3 1493 aa24.24■■□□□ 1.47
ITGA7-208ENST00000554327 KDM6BO15054 1643 aa24.23■■□□□ 1.47
ITGA7-208ENST00000554327 KIAA1107Q9UPP5 1409 aa24.23■■□□□ 1.47
ITGA7-208ENST00000554327 SHANK2Q9UPX8 1470 aa24.23■■□□□ 1.47
ITGA7-208ENST00000554327 KIF13AQ9H1H9 1805 aa24.22■■□□□ 1.47
ITGA7-208ENST00000554327 ROCK1Q13464 1354 aa24.21■■□□□ 1.47
ITGA7-208ENST00000554327 C9orf84Q5VXU9 1444 aa24.21■■□□□ 1.47
ITGA7-208ENST00000554327 TSPOAP1O95153 1857 aa24.2■■□□□ 1.46
ITGA7-208ENST00000554327 ADGRL2O95490 1459 aa24.2■■□□□ 1.46
ITGA7-208ENST00000554327 CFAP74Q9C0B2 1584 aa24.19■■□□□ 1.46
ITGA7-208ENST00000554327 NCOA1Q15788 1441 aa24.18■■□□□ 1.46
ITGA7-208ENST00000554327 ADGRL1O94910 1474 aa24.17■■□□□ 1.46
ITGA7-208ENST00000554327 TRAPPC8Q9Y2L5 1435 aa24.17■■□□□ 1.46
ITGA7-208ENST00000554327 FAM69CQ0P6D2 419 aa24.17■■□□□ 1.46
ITGA7-208ENST00000554327 MAST1Q9Y2H9 1570 aa24.15■■□□□ 1.46
ITGA7-208ENST00000554327 TSPY4P0CV99 314 aa24.14■■□□□ 1.46
ITGA7-208ENST00000554327 TSPY10P0CW01 314 aa24.14■■□□□ 1.46
ITGA7-208ENST00000554327 RSPH4AQ5TD94 716 aa24.14■■□□□ 1.46
ITGA7-208ENST00000554327 PPRC1Q5VV67 1664 aaKnown RBP24.14■■□□□ 1.46
ITGA7-208ENST00000554327 ANKRD30AQ9BXX3 1397 aa24.12■■□□□ 1.45
ITGA7-208ENST00000554327 SCAPERQ9BY12 1400 aa24.12■■□□□ 1.45
ITGA7-208ENST00000554327 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
ITGA7-208ENST00000554327 PLXNC1O60486 1568 aa24.08■■□□□ 1.45
ITGA7-208ENST00000554327 NEO1Q92859 1461 aa24.07■■□□□ 1.44
ITGA7-208ENST00000554327 ZFYVE16Q7Z3T8 1539 aa24.06■■□□□ 1.44
ITGA7-208ENST00000554327 KIF15Q9NS87 1388 aa24.05■■□□□ 1.44
ITGA7-208ENST00000554327 INO80Q9ULG1 1556 aaPredicted RBP24.05■■□□□ 1.44
ITGA7-208ENST00000554327 ANKRD50Q9ULJ7 1429 aa24.02■■□□□ 1.44
ITGA7-208ENST00000554327 ATP7AQ04656 1500 aa24.01■■□□□ 1.43
ITGA7-208ENST00000554327 POGZQ7Z3K3 1410 aa24.01■■□□□ 1.43
ITGA7-208ENST00000554327 ZNF518AQ6AHZ1 1483 aa24.01■■□□□ 1.43
ITGA7-208ENST00000554327 RICTORQ6R327 1708 aa24.01■■□□□ 1.43
ITGA7-208ENST00000554327 SPAG9O60271 1321 aaKnown RBP24■■□□□ 1.43
ITGA7-208ENST00000554327 KIDINS220Q9ULH0 1771 aa24■■□□□ 1.43
ITGA7-208ENST00000554327 KDM5CP41229 1560 aa24■■□□□ 1.43
ITGA7-208ENST00000554327 RTEL1-TNFRSF6BF6WH68 1400 aa23.98■■□□□ 1.43
ITGA7-208ENST00000554327 TEX14Q8IWB6 1497 aa23.96■■□□□ 1.43
ITGA7-208ENST00000554327 DENND4BO75064 1496 aaPredicted RBP23.95■■□□□ 1.42
ITGA7-208ENST00000554327 TRIM52Q96A61 297 aa23.95■■□□□ 1.42
ITGA7-208ENST00000554327 DUOX2Q9NRD8 1548 aa23.95■■□□□ 1.42
ITGA7-208ENST00000554327 FRMPD1Q5SYB0 1578 aa23.94■■□□□ 1.42
ITGA7-208ENST00000554327 HECW2Q9P2P5 1572 aa23.94■■□□□ 1.42
ITGA7-208ENST00000554327 RAPGEF3O95398 923 aa23.94■■□□□ 1.42
ITGA7-208ENST00000554327 ZNF316A6NFI3 1004 aaPredicted RBP23.93■■□□□ 1.42
ITGA7-208ENST00000554327 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
ITGA7-208ENST00000554327 ABCA6Q8N139 1617 aa23.88■■□□□ 1.41
ITGA7-208ENST00000554327 ERBINQ96RT1 1412 aa23.88■■□□□ 1.41
ITGA7-208ENST00000554327 MLH3Q9UHC1 1453 aa23.88■■□□□ 1.41
ITGA7-208ENST00000554327 PZPP20742 1482 aa23.87■■□□□ 1.41
ITGA7-208ENST00000554327 UNC13BO14795 1591 aa23.87■■□□□ 1.41
ITGA7-208ENST00000554327 MPHOSPH9Q99550 1183 aa23.85■■□□□ 1.41
ITGA7-208ENST00000554327 SIN3AQ96ST3 1273 aa23.84■■□□□ 1.41
ITGA7-208ENST00000554327 KDM5DQ9BY66 1539 aa23.83■■□□□ 1.41
ITGA7-208ENST00000554327 COL17A1Q9UMD9 1497 aaPredicted RBP23.82■■□□□ 1.4
ITGA7-208ENST00000554327 ZMYM4Q5VZL5 1548 aa23.81■■□□□ 1.4
ITGA7-208ENST00000554327 NUP155O75694 1391 aa23.81■■□□□ 1.4
ITGA7-208ENST00000554327 ACIN1Q9UKV3 1341 aaKnown RBP23.81■■□□□ 1.4
ITGA7-208ENST00000554327 DIP2CQ9Y2E4 1556 aa23.81■■□□□ 1.4
ITGA7-208ENST00000554327 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
ITGA7-208ENST00000554327 NEUROD1Q13562 356 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms