RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 DNAJC5Q9H3Z4 198 aa12.77□□□□□ -0.37
KTN1-213ENST00000554306 DOK7Q18PE1 504 aa12.76□□□□□ -0.37
KTN1-213ENST00000554306 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
KTN1-213ENST00000554306 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
KTN1-213ENST00000554306 HOXB3P14651 431 aaPredicted RBP12.73□□□□□ -0.37
KTN1-213ENST00000554306 ZNF710Q8N1W2 664 aa12.73□□□□□ -0.37
KTN1-213ENST00000554306 RIMBP2O15034 1052 aa12.72□□□□□ -0.37
KTN1-213ENST00000554306 RYDENQ9NUL5 291 aaKnown RBP12.72□□□□□ -0.37
KTN1-213ENST00000554306 PPP1R37O75864 691 aa12.68□□□□□ -0.38
KTN1-213ENST00000554306 EMP3P54852 163 aa12.68□□□□□ -0.38
KTN1-213ENST00000554306 MARVELD3Q96A59 401 aa12.68□□□□□ -0.38
KTN1-213ENST00000554306 CDAN1Q8IWY9 1227 aa12.67□□□□□ -0.38
KTN1-213ENST00000554306 ZSWIM6Q9HCJ5 1215 aa12.66□□□□□ -0.38
KTN1-213ENST00000554306 HOXB1P14653 301 aaPredicted RBP12.65□□□□□ -0.38
KTN1-213ENST00000554306 NKX1-1Q15270 411 aaPredicted RBP12.65□□□□□ -0.38
KTN1-213ENST00000554306 KIF3CO14782 793 aa12.64□□□□□ -0.39
KTN1-213ENST00000554306 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
KTN1-213ENST00000554306 TMC2Q8TDI7 906 aa12.63□□□□□ -0.39
KTN1-213ENST00000554306 C2orf72A6NCS6 295 aa12.62□□□□□ -0.39
KTN1-213ENST00000554306 PLSCR2Q9NRY7 297 aa12.61□□□□□ -0.39
KTN1-213ENST00000554306 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
KTN1-213ENST00000554306 HS3ST6Q96QI5 342 aa12.56□□□□□ -0.4
KTN1-213ENST00000554306 GPR153Q6NV75 609 aa12.55□□□□□ -0.4
KTN1-213ENST00000554306 ERBB3P21860 1342 aa12.52□□□□□ -0.41
KTN1-213ENST00000554306 GTPBP6O43824 516 aaPredicted RBP12.51□□□□□ -0.41
KTN1-213ENST00000554306 SLC34A2O95436 690 aa12.51□□□□□ -0.41
KTN1-213ENST00000554306 GPHNQ9NQX3 736 aaPredicted RBP12.51□□□□□ -0.41
KTN1-213ENST00000554306 SCRIBQ14160 1630 aa12.5□□□□□ -0.41
KTN1-213ENST00000554306 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
KTN1-213ENST00000554306 ARSIQ5FYB1 569 aa12.49□□□□□ -0.41
KTN1-213ENST00000554306 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
KTN1-213ENST00000554306 FOXK1P85037 733 aa12.48□□□□□ -0.41
KTN1-213ENST00000554306 UNC13AQ9UPW8 1703 aa12.48□□□□□ -0.41
KTN1-213ENST00000554306 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
KTN1-213ENST00000554306 VARS2Q5ST30 1063 aaKnown RBP12.44□□□□□ -0.42
KTN1-213ENST00000554306 PLPP6Q8IY26 295 aa12.43□□□□□ -0.42
KTN1-213ENST00000554306 PCDHGA4Q9Y5G9 962 aa12.43□□□□□ -0.42
KTN1-213ENST00000554306 SHROOM4Q9ULL8 1493 aa12.42□□□□□ -0.42
KTN1-213ENST00000554306 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.422e-8■□□□□ 11.1
KTN1-213ENST00000554306 DSG2Q14126 1118 aa12.41□□□□□ -0.42
KTN1-213ENST00000554306 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
KTN1-213ENST00000554306 CRISPLD2Q9H0B8 497 aa12.41□□□□□ -0.42
KTN1-213ENST00000554306 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
KTN1-213ENST00000554306 PDE4AP27815 886 aa12.4□□□□□ -0.42
KTN1-213ENST00000554306 NUDT7P0C024 238 aa12.39□□□□□ -0.43
KTN1-213ENST00000554306 PTCD2Q8WV60 388 aaKnown RBP12.39□□□□□ -0.43
KTN1-213ENST00000554306 KRTAP3-3Q9BYR6 98 aa12.39□□□□□ -0.43
KTN1-213ENST00000554306 KRTAP3-2Q9BYR7 98 aa12.39□□□□□ -0.43
KTN1-213ENST00000554306 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
KTN1-213ENST00000554306 TBC1D12O60347 775 aa12.36□□□□□ -0.43
KTN1-213ENST00000554306 NCKAP5LQ9HCH0 1330 aa12.35□□□□□ -0.43
KTN1-213ENST00000554306 PPP1R15BQ5SWA1 713 aa12.34□□□□□ -0.43
KTN1-213ENST00000554306 SPNS2Q8IVW8 549 aa12.34□□□□□ -0.43
KTN1-213ENST00000554306 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.32□□□□□ -0.44
KTN1-213ENST00000554306 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
KTN1-213ENST00000554306 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
KTN1-213ENST00000554306 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
KTN1-213ENST00000554306 PSDA5PKW4 1024 aaPredicted RBP12.29□□□□□ -0.44
KTN1-213ENST00000554306 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
KTN1-213ENST00000554306 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.45
KTN1-213ENST00000554306 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
KTN1-213ENST00000554306 OXER1Q8TDS5 423 aa12.27□□□□□ -0.45
KTN1-213ENST00000554306 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
KTN1-213ENST00000554306 MFSD10Q14728 455 aa12.26□□□□□ -0.45
KTN1-213ENST00000554306 PBX2P40425 430 aa12.23□□□□□ -0.45
KTN1-213ENST00000554306 UPF1Q92900 1129 aaKnown RBP eCLIP12.23□□□□□ -0.45
KTN1-213ENST00000554306 CADPS2Q86UW7 1296 aa12.22□□□□□ -0.45
KTN1-213ENST00000554306 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
KTN1-213ENST00000554306 PTGER2P43116 358 aa12.16□□□□□ -0.46
KTN1-213ENST00000554306 LSM11P83369 360 aaKnown RBP eCLIP12.16□□□□□ -0.46
KTN1-213ENST00000554306 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
KTN1-213ENST00000554306 CFAP44Q96MT7 982 aa12.16□□□□□ -0.46
KTN1-213ENST00000554306 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
KTN1-213ENST00000554306 ARHGAP33O14559 1287 aa12.14□□□□□ -0.47
KTN1-213ENST00000554306 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
KTN1-213ENST00000554306 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
KTN1-213ENST00000554306 EVI5O60447 810 aa12.12□□□□□ -0.47
KTN1-213ENST00000554306 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
KTN1-213ENST00000554306 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
KTN1-213ENST00000554306 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
KTN1-213ENST00000554306 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
KTN1-213ENST00000554306 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
KTN1-213ENST00000554306 KCNH8Q96L42 1107 aa12.09□□□□□ -0.47
KTN1-213ENST00000554306 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
KTN1-213ENST00000554306 RNF166Q96A37 237 aaPredicted RBP12.07□□□□□ -0.48
KTN1-213ENST00000554306 FOSBP53539 338 aa12.06□□□□□ -0.48
KTN1-213ENST00000554306 JPH4Q96JJ6 628 aa12.06□□□□□ -0.48
KTN1-213ENST00000554306 TK2O00142 265 aa12.03□□□□□ -0.48
KTN1-213ENST00000554306 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
KTN1-213ENST00000554306 PSEN2P49810 448 aa12.02□□□□□ -0.49
KTN1-213ENST00000554306 ADGRD1Q6QNK2 874 aa12.02□□□□□ -0.49
KTN1-213ENST00000554306 KCNK17Q96T54 332 aa12.01□□□□□ -0.49
KTN1-213ENST00000554306 CECR2Q9BXF3 1484 aa12.01□□□□□ -0.49
KTN1-213ENST00000554306 DMRTA1Q5VZB9 504 aa12□□□□□ -0.49
KTN1-213ENST00000554306 ZDHHC16Q969W1 377 aa12□□□□□ -0.49
KTN1-213ENST00000554306 WDR70Q9NW82 654 aa12□□□□□ -0.49
KTN1-213ENST00000554306 BAZ1AQ9NRL2 1556 aaPredicted RBP12□□□□□ -0.49
KTN1-213ENST00000554306 DPYSL4O14531 572 aa11.99□□□□□ -0.49
KTN1-213ENST00000554306 PTPREP23469 700 aa11.99□□□□□ -0.49
KTN1-213ENST00000554306 EIF4G1Q04637 1599 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms