RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 POGZQ7Z3K3 1410 aa35.83■■■■□ 3.33
RCCD1-202ENST00000554302 ARID4BQ4LE39 1312 aaPredicted RBP35.83■■■■□ 3.33
RCCD1-202ENST00000554302 MADDQ8WXG6 1647 aa35.82■■■■□ 3.32
RCCD1-202ENST00000554302 ZFYVE16Q7Z3T8 1539 aa35.82■■■■□ 3.32
RCCD1-202ENST00000554302 YEATS2Q9ULM3 1422 aa35.81■■■■□ 3.32
RCCD1-202ENST00000554302 EFCAB2Q5VUJ9 269 aa35.8■■■■□ 3.32
RCCD1-202ENST00000554302 CASKIN1Q8WXD9 1431 aa35.8■■■■□ 3.32
RCCD1-202ENST00000554302 CLIP1P30622 1438 aa35.77■■■■□ 3.32
RCCD1-202ENST00000554302 PLPPR3Q6T4P5 718 aa35.77■■■■□ 3.32
RCCD1-202ENST00000554302 PCF11O94913 1555 aaKnown RBP35.76■■■■□ 3.32
RCCD1-202ENST00000554302 SIGLEC1Q9BZZ2 1709 aa35.75■■■■□ 3.31
RCCD1-202ENST00000554302 CCDC18Q5T9S5 1454 aa35.73■■■■□ 3.31
RCCD1-202ENST00000554302 ARHGAP5Q13017 1502 aa35.67■■■■□ 3.3
RCCD1-202ENST00000554302 RIMS1Q86UR5 1692 aaKnown RBP35.65■■■■□ 3.3
RCCD1-202ENST00000554302 FYCO1Q9BQS8 1478 aa35.65■■■■□ 3.3
RCCD1-202ENST00000554302 CDC42BPBQ9Y5S2 1711 aa35.64■■■■□ 3.3
RCCD1-202ENST00000554302 ZNF518AQ6AHZ1 1483 aa35.64■■■■□ 3.3
RCCD1-202ENST00000554302 ATP10AO60312 1499 aa35.63■■■■□ 3.29
RCCD1-202ENST00000554302 KDM5CP41229 1560 aa35.62■■■■□ 3.29
RCCD1-202ENST00000554302 PREX2Q70Z35 1606 aa35.59■■■■□ 3.29
RCCD1-202ENST00000554302 C9orf84Q5VXU9 1444 aa35.58■■■■□ 3.29
RCCD1-202ENST00000554302 ILDR1Q86SU0 546 aaPredicted RBP35.57■■■■□ 3.28
RCCD1-202ENST00000554302 AFAP1Q8N556 730 aa35.56■■■■□ 3.28
RCCD1-202ENST00000554302 LMTK3Q96Q04 1460 aa35.55■■■■□ 3.28
RCCD1-202ENST00000554302 ARHGEF12Q9NZN5 1544 aa35.52■■■■□ 3.28
RCCD1-202ENST00000554302 ABCC1P33527 1531 aa35.51■■■■□ 3.27
RCCD1-202ENST00000554302 FER1L4A9Z1Z3 1794 aa35.49■■■■□ 3.27
RCCD1-202ENST00000554302 MLECQ14165 292 aa35.49■■■■□ 3.27
RCCD1-202ENST00000554302 CDC42BPAQ5VT25 1732 aa35.49■■■■□ 3.27
RCCD1-202ENST00000554302 MLH3Q9UHC1 1453 aa35.48■■■■□ 3.27
RCCD1-202ENST00000554302 DIP2CQ9Y2E4 1556 aa35.46■■■■□ 3.27
RCCD1-202ENST00000554302 TRAPPC8Q9Y2L5 1435 aa35.45■■■■□ 3.27
RCCD1-202ENST00000554302 REREQ9P2R6 1566 aa35.45■■■■□ 3.27
RCCD1-202ENST00000554302 ITSN2Q9NZM3 1697 aa35.44■■■■□ 3.26
RCCD1-202ENST00000554302 ABCA6Q8N139 1617 aa35.4■■■■□ 3.26
RCCD1-202ENST00000554302 GPATCH8Q9UKJ3 1502 aaKnown RBP35.39■■■■□ 3.26
RCCD1-202ENST00000554302 SAMD9LQ8IVG5 1584 aa35.34■■■■□ 3.25
RCCD1-202ENST00000554302 MYT1LQ9UL68 1186 aa35.33■■■■□ 3.25
RCCD1-202ENST00000554302 KIDINS220Q9ULH0 1771 aa35.33■■■■□ 3.25
RCCD1-202ENST00000554302 AGLP35573 1532 aa35.32■■■■□ 3.25
RCCD1-202ENST00000554302 HSPA2P54652 639 aa35.28■■■■□ 3.24
RCCD1-202ENST00000554302 SYCP2Q9BX26 1530 aa35.26■■■■□ 3.23
RCCD1-202ENST00000554302 CEP162Q5TB80 1403 aa35.25■■■■□ 3.23
RCCD1-202ENST00000554302 KIAA1107Q9UPP5 1409 aa35.24■■■■□ 3.23
RCCD1-202ENST00000554302 ZNF777Q9ULD5 760 aaPredicted RBP35.24■■■■□ 3.23
RCCD1-202ENST00000554302 MTUS2Q5JR59 1369 aa35.24■■■■□ 3.23
RCCD1-202ENST00000554302 CEBPAP49715 358 aaPredicted RBP35.23■■■■□ 3.23
RCCD1-202ENST00000554302 CCNB3Q8WWL7 1395 aa35.22■■■■□ 3.23
RCCD1-202ENST00000554302 PREX1Q8TCU6 1659 aa35.21■■■■□ 3.23
RCCD1-202ENST00000554302 CFDP1Q9UEE9 299 aaPredicted RBP35.2■■■■□ 3.23
RCCD1-202ENST00000554302 PLEKHH2Q8IVE3 1493 aa35.2■■■■□ 3.23
RCCD1-202ENST00000554302 HNRNPMP52272 730 aaKnown RBP eCLIP35.19■■■■□ 3.22
RCCD1-202ENST00000554302 EHBP1L1Q8N3D4 1523 aa35.16■■■■□ 3.22
RCCD1-202ENST00000554302 SPAG9O60271 1321 aaKnown RBP35.14■■■■□ 3.22
RCCD1-202ENST00000554302 TIAM1Q13009 1591 aa35.14■■■■□ 3.22
RCCD1-202ENST00000554302 FBXO41Q8TF61 875 aa35.13■■■■□ 3.21
RCCD1-202ENST00000554302 C3P01024 1663 aa35.12■■■■□ 3.21
RCCD1-202ENST00000554302 INO80Q9ULG1 1556 aaPredicted RBP35.12■■■■□ 3.21
RCCD1-202ENST00000554302 ATP7AQ04656 1500 aa35.11■■■■□ 3.21
RCCD1-202ENST00000554302 SETD1BQ9UPS6 1966 aaKnown RBP35.09■■■■□ 3.21
RCCD1-202ENST00000554302 CNTLNQ9NXG0 1405 aa35.06■■■■□ 3.2
RCCD1-202ENST00000554302 PLXNC1O60486 1568 aa35.06■■■■□ 3.2
RCCD1-202ENST00000554302 UHRF1BP1Q6BDS2 1440 aa35.06■■■■□ 3.2
RCCD1-202ENST00000554302 ESF1Q9H501 851 aaKnown RBP35.04■■■■□ 3.2
RCCD1-202ENST00000554302 MBD5Q9P267 1494 aa35.03■■■■□ 3.2
RCCD1-202ENST00000554302 ZNF644Q9H582 1327 aaPredicted RBP35.03■■■■□ 3.2
RCCD1-202ENST00000554302 A2MP01023 1474 aa35.01■■■■□ 3.19
RCCD1-202ENST00000554302 SUPT6HQ7KZ85 1726 aaKnown RBP35■■■■□ 3.19
RCCD1-202ENST00000554302 MROH2AA6NES4 1674 aa34.98■■■■□ 3.19
RCCD1-202ENST00000554302 STRCQ7RTU9 1775 aa34.97■■■■□ 3.19
RCCD1-202ENST00000554302 NCOA2Q15596 1464 aa34.96■■■■□ 3.19
RCCD1-202ENST00000554302 ADGBQ8N7X0 1667 aa34.93■■■■□ 3.18
RCCD1-202ENST00000554302 RTEL1-TNFRSF6BF6WH68 1400 aa34.93■■■■□ 3.18
RCCD1-202ENST00000554302 LOC105371045A0A1W2PR82 267 aa34.92■■■■□ 3.18
RCCD1-202ENST00000554302 NPATQ14207 1427 aa34.9■■■■□ 3.18
RCCD1-202ENST00000554302 VPS8Q8N3P4 1428 aa34.9■■■■□ 3.18
RCCD1-202ENST00000554302 ZMYM3Q14202 1370 aa34.9■■■■□ 3.18
RCCD1-202ENST00000554302 DMRT2Q9Y5R5 561 aa34.87■■■■□ 3.17
RCCD1-202ENST00000554302 CLTCQ00610 1675 aaKnown RBP34.85■■■■□ 3.17
RCCD1-202ENST00000554302 CAMSAP2Q08AD1 1489 aa34.84■■■■□ 3.17
RCCD1-202ENST00000554302 CERKQ8TCT0 537 aa34.84■■■■□ 3.17
RCCD1-202ENST00000554302 PPP6R1Q9UPN7 881 aa34.83■■■■□ 3.17
RCCD1-202ENST00000554302 CCDC141Q6ZP82 1450 aa34.83■■■■□ 3.17
RCCD1-202ENST00000554302 LRRC9Q6ZRR7 1453 aa34.82■■■■□ 3.16
RCCD1-202ENST00000554302 DHX29Q7Z478 1369 aaKnown RBP34.81■■■■□ 3.16
RCCD1-202ENST00000554302 RSPH4AQ5TD94 716 aa34.8■■■■□ 3.16
RCCD1-202ENST00000554302 GGT6Q6P531 493 aa34.8■■■■□ 3.16
RCCD1-202ENST00000554302 PTPRTO14522 1441 aa34.8■■■■□ 3.16
RCCD1-202ENST00000554302 MAP3K1Q13233 1512 aa34.78■■■■□ 3.16
RCCD1-202ENST00000554302 PTPRKQ15262 1439 aa34.76■■■■□ 3.16
RCCD1-202ENST00000554302 NCOA1Q15788 1441 aa34.76■■■■□ 3.16
RCCD1-202ENST00000554302 ARHGEF5Q12774 1597 aa34.75■■■■□ 3.15
RCCD1-202ENST00000554302 MYO3AQ8NEV4 1616 aa34.69■■■■□ 3.14
RCCD1-202ENST00000554302 ZNF142P52746 1687 aaPredicted RBP34.69■■■■□ 3.14
RCCD1-202ENST00000554302 CAMSAP1Q5T5Y3 1602 aa34.68■■■■□ 3.14
RCCD1-202ENST00000554302 KANK4Q5T7N3 995 aaPredicted RBP34.68■■■■□ 3.14
RCCD1-202ENST00000554302 FAM135AQ9P2D6 1515 aa34.64■■■■□ 3.14
RCCD1-202ENST00000554302 KIF3BO15066 747 aa34.63■■■■□ 3.13
RCCD1-202ENST00000554302 CEP170BQ9Y4F5 1589 aaPredicted RBP34.62■■■■□ 3.13
RCCD1-202ENST00000554302 TSPY4P0CV99 314 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms